Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is zur [H]

Identifier: 37681157

GI number: 37681157

Start: 3050730

End: 3051179

Strand: Direct

Name: zur [H]

Synonym: VV2973

Alternate gene names: 37681157

Gene position: 3050730-3051179 (Clockwise)

Preceding gene: 37681154

Following gene: 37681158

Centisome position: 90.94

GC content: 43.56

Gene sequence:

>450_bases
ATGGTGAAAGCTTTGGACCAGACACTAGTTGAGCAAATAGAAGGCATATGTTCGGCACGAGGAGTCCGACTGACTCCGCA
ACGTAAGCGAGTTTTTGAACTGATTTGTTCAAACTCAAGAGCCTCCAGCGCTTATGAATTACTGGAGCAGCTCAAGGAGA
GCGAACCTCAAGCCAAACCTCCTACCGTCTATCGCGCTTTGGAATTTTTAATGGAGCAGGGCTTTATTCATCGGGTTGAA
TCGACCAACAGTTTTATCTCCTGCTGCTCTTGCAACGCAAACCAACATTTTTTCCAATTACTTATTTGTGATAAATGTGG
GGATGTCGTTGAACTTCAGGATGATACACTGATATCCTTGTTGGCCAATAATGCTGAGAAATACGGCTTTAAATTGACCA
ATCAAGTGATCGAAACTCACGGTACCTGTAAAACTTGTCTCTCAGAGTGA

Upstream 100 bases:

>100_bases
CTGACCGTTTGTGACAAAGATAAAAGCTTATTTGGATTTTTATCGGTTTCTCAACGATCTTCGTATAGAAATAGTTTATT
ATTAAGAAAGTCCAATCATT

Downstream 100 bases:

>100_bases
AAGAATAAAGATATAGAAGAACGTTATGCGCGCTGAATTTGTAAACCCGTTTTTAGCATCTCTAATGAATGTTCTAAAAA
CGATGGCTTCACTGGAATTG

Product: putative zinc uptake regulation protein

Products: NA

Alternate protein names: Zinc uptake regulator [H]

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MVKALDQTLVEQIEGICSARGVRLTPQRKRVFELICSNSRASSAYELLEQLKESEPQAKPPTVYRALEFLMEQGFIHRVE
STNSFISCCSCNANQHFFQLLICDKCGDVVELQDDTLISLLANNAEKYGFKLTNQVIETHGTCKTCLSE

Sequences:

>Translated_149_residues
MVKALDQTLVEQIEGICSARGVRLTPQRKRVFELICSNSRASSAYELLEQLKESEPQAKPPTVYRALEFLMEQGFIHRVE
STNSFISCCSCNANQHFFQLLICDKCGDVVELQDDTLISLLANNAEKYGFKLTNQVIETHGTCKTCLSE
>Mature_149_residues
MVKALDQTLVEQIEGICSARGVRLTPQRKRVFELICSNSRASSAYELLEQLKESEPQAKPPTVYRALEFLMEQGFIHRVE
STNSFISCCSCNANQHFFQLLICDKCGDVVELQDDTLISLLANNAEKYGFKLTNQVIETHGTCKTCLSE

Specific function: Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes (znuACB) [H]

COG id: COG0735

COG function: function code P; Fe2+/Zn2+ uptake regulation proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Fur family [H]

Homologues:

Organism=Escherichia coli, GI87082363, Length=147, Percent_Identity=49.6598639455782, Blast_Score=146, Evalue=6e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002481
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01475 FUR [H]

EC number: NA

Molecular weight: Translated: 16768; Mature: 16768

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
6.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKALDQTLVEQIEGICSARGVRLTPQRKRVFELICSNSRASSAYELLEQLKESEPQAKP
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC
PTVYRALEFLMEQGFIHRVESTNSFISCCSCNANQHFFQLLICDKCGDVVELQDDTLISL
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCHHHHHH
LANNAEKYGFKLTNQVIETHGTCKTCLSE
HHCCHHHHHHHHHHHHHHHCCHHHHHHCC
>Mature Secondary Structure
MVKALDQTLVEQIEGICSARGVRLTPQRKRVFELICSNSRASSAYELLEQLKESEPQAKP
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC
PTVYRALEFLMEQGFIHRVESTNSFISCCSCNANQHFFQLLICDKCGDVVELQDDTLISL
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCHHHHHH
LANNAEKYGFKLTNQVIETHGTCKTCLSE
HHCCHHHHHHHHHHHHHHHCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503; 9680209 [H]