| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is zur [H]
Identifier: 37681157
GI number: 37681157
Start: 3050730
End: 3051179
Strand: Direct
Name: zur [H]
Synonym: VV2973
Alternate gene names: 37681157
Gene position: 3050730-3051179 (Clockwise)
Preceding gene: 37681154
Following gene: 37681158
Centisome position: 90.94
GC content: 43.56
Gene sequence:
>450_bases ATGGTGAAAGCTTTGGACCAGACACTAGTTGAGCAAATAGAAGGCATATGTTCGGCACGAGGAGTCCGACTGACTCCGCA ACGTAAGCGAGTTTTTGAACTGATTTGTTCAAACTCAAGAGCCTCCAGCGCTTATGAATTACTGGAGCAGCTCAAGGAGA GCGAACCTCAAGCCAAACCTCCTACCGTCTATCGCGCTTTGGAATTTTTAATGGAGCAGGGCTTTATTCATCGGGTTGAA TCGACCAACAGTTTTATCTCCTGCTGCTCTTGCAACGCAAACCAACATTTTTTCCAATTACTTATTTGTGATAAATGTGG GGATGTCGTTGAACTTCAGGATGATACACTGATATCCTTGTTGGCCAATAATGCTGAGAAATACGGCTTTAAATTGACCA ATCAAGTGATCGAAACTCACGGTACCTGTAAAACTTGTCTCTCAGAGTGA
Upstream 100 bases:
>100_bases CTGACCGTTTGTGACAAAGATAAAAGCTTATTTGGATTTTTATCGGTTTCTCAACGATCTTCGTATAGAAATAGTTTATT ATTAAGAAAGTCCAATCATT
Downstream 100 bases:
>100_bases AAGAATAAAGATATAGAAGAACGTTATGCGCGCTGAATTTGTAAACCCGTTTTTAGCATCTCTAATGAATGTTCTAAAAA CGATGGCTTCACTGGAATTG
Product: putative zinc uptake regulation protein
Products: NA
Alternate protein names: Zinc uptake regulator [H]
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MVKALDQTLVEQIEGICSARGVRLTPQRKRVFELICSNSRASSAYELLEQLKESEPQAKPPTVYRALEFLMEQGFIHRVE STNSFISCCSCNANQHFFQLLICDKCGDVVELQDDTLISLLANNAEKYGFKLTNQVIETHGTCKTCLSE
Sequences:
>Translated_149_residues MVKALDQTLVEQIEGICSARGVRLTPQRKRVFELICSNSRASSAYELLEQLKESEPQAKPPTVYRALEFLMEQGFIHRVE STNSFISCCSCNANQHFFQLLICDKCGDVVELQDDTLISLLANNAEKYGFKLTNQVIETHGTCKTCLSE >Mature_149_residues MVKALDQTLVEQIEGICSARGVRLTPQRKRVFELICSNSRASSAYELLEQLKESEPQAKPPTVYRALEFLMEQGFIHRVE STNSFISCCSCNANQHFFQLLICDKCGDVVELQDDTLISLLANNAEKYGFKLTNQVIETHGTCKTCLSE
Specific function: Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes (znuACB) [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI87082363, Length=147, Percent_Identity=49.6598639455782, Blast_Score=146, Evalue=6e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16768; Mature: 16768
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 6.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKALDQTLVEQIEGICSARGVRLTPQRKRVFELICSNSRASSAYELLEQLKESEPQAKP CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC PTVYRALEFLMEQGFIHRVESTNSFISCCSCNANQHFFQLLICDKCGDVVELQDDTLISL CHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCHHHHHH LANNAEKYGFKLTNQVIETHGTCKTCLSE HHCCHHHHHHHHHHHHHHHCCHHHHHHCC >Mature Secondary Structure MVKALDQTLVEQIEGICSARGVRLTPQRKRVFELICSNSRASSAYELLEQLKESEPQAKP CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC PTVYRALEFLMEQGFIHRVESTNSFISCCSCNANQHFFQLLICDKCGDVVELQDDTLISL CHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCHHHHHH LANNAEKYGFKLTNQVIETHGTCKTCLSE HHCCHHHHHHHHHHHHHHHCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 9680209 [H]