| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37679617
Identifier: 37679617
GI number: 37679617
Start: 1462760
End: 1463884
Strand: Direct
Name: 37679617
Synonym: VV1433
Alternate gene names: NA
Gene position: 1462760-1463884 (Clockwise)
Preceding gene: 37679616
Following gene: 37679618
Centisome position: 43.61
GC content: 46.22
Gene sequence:
>1125_bases ATGAAGTGGTTAGCTGGAAAATCCAATAATCTTGCATTAATGCTCACTTTTCTTTTAGCGGCTATGGTGACAGCTGCGAT GGGCTTTTATTGGTCTCAATCCGCCACCAATGAGGCGCAAGAATATCGACTGAACAACTCTTTGGGCATACAGGACAAAA CGATCTTTGAGCCTGTATTACCCAATAAAAAAGTCTCGTTGCCGGAAGATTTCAAATTTCATGAGCAATACCAGCATGAA TGGTGGCACTATTTTGCAACGCTGCAAGACGAATTTGGTCAATTCTACACCGTCCAGTTTAGTTTGTTCCGCATCGCGAC TGATGAAAGAGAAGTCAGTGGTTGGCAAAACCCTCAGCTTTATCTCGCTAACGTTGTTTTAACGGGAAAAGAAAAGATCT GGCGGGAGCAACGCGTGGCCAGAGGTGGGATAGGCCAAGCGGGGTCAACCAATAAACCCTTTCGTATGTGGATCGATAAC TGGACATGGCGTTCGTTGGGTACAACGCCGTTTCCAGGAAGCCTAACAATAGCAACCGATGATTTTTCGCTGGAACTGGC GACGAGGACGGGTGGCCCATTTGTTCTCAATGGTGATAAAGGCTATCAAGTTAAACACGATCTCGAGTCGGTTGCGTCAT TCAGCATTAGCGCTCCCTTTCTCGATGTAAAAGGCAGTATGTTCTTAGAAGGTCGTCGTATTGAAGTAACGGGCAATGCG TGGCTACAAAAAGAGTGGGGCAGCAACCTTTTCGAAGAAGGGCAGCAAGGGTGGGATTGGTTCACCTTCAACCTCGACAA CGACAAAGCACTTAGCATCAGCCGTTACCGTCATCAAAGTCGAGTTCCTTATATTTTTGGTACGCTATCAACGTCGTCTG GCAAAGTCATACCGTTAACGGAAAAGGATGTGACGGTTTATCCGATCCTCTACACAACGCTGTCAGACGGAAAGCGCATT CCATTGCAATGGGCGATTGAAATTCCAAGTCAAGACATCTACGTGCAAACGAAAGCGGTACAGCAAGAGATGTGGTTACC CTTTTTGATTCCCTATTGGGAAGGGCCAATAAATGTGGCAGGTAGCAAGTCTGGAAGAGGCTTTATGCAATTAACGGGTT ATTAA
Upstream 100 bases:
>100_bases CATTCTTTGGGCGATGATTGCGATTATGCTTGCTGGCGCATTACCCGTTATCCGTCTGGTTAAGAACACGCCAATGAAAT CATTAAGGGATTCATTCTAG
Downstream 100 bases:
>100_bases AACAATGGGCTCCTGATGGAGCTCATTGTTTATCTGTTACGATTTATGAATAATCAATCGCTTTACTAACATCCGTTTAA CGAATTGGCTATAATCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Hydrolase; Lipoprotein; Hydrolase; ABC Transporter Type C Secreted Protein; ABC Transporter Lipoprotein; Secreted Hydrolase-Like; Twin-Arginine Translocation Pathway Signal; ABC-Type Transport System Hydrolase Component; Signal Peptide; Hydroxyneurosporene Synthase; Attachment Protein; Hydroxymethylglutaryl-Co A Reductase
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MKWLAGKSNNLALMLTFLLAAMVTAAMGFYWSQSATNEAQEYRLNNSLGIQDKTIFEPVLPNKKVSLPEDFKFHEQYQHE WWHYFATLQDEFGQFYTVQFSLFRIATDEREVSGWQNPQLYLANVVLTGKEKIWREQRVARGGIGQAGSTNKPFRMWIDN WTWRSLGTTPFPGSLTIATDDFSLELATRTGGPFVLNGDKGYQVKHDLESVASFSISAPFLDVKGSMFLEGRRIEVTGNA WLQKEWGSNLFEEGQQGWDWFTFNLDNDKALSISRYRHQSRVPYIFGTLSTSSGKVIPLTEKDVTVYPILYTTLSDGKRI PLQWAIEIPSQDIYVQTKAVQQEMWLPFLIPYWEGPINVAGSKSGRGFMQLTGY
Sequences:
>Translated_374_residues MKWLAGKSNNLALMLTFLLAAMVTAAMGFYWSQSATNEAQEYRLNNSLGIQDKTIFEPVLPNKKVSLPEDFKFHEQYQHE WWHYFATLQDEFGQFYTVQFSLFRIATDEREVSGWQNPQLYLANVVLTGKEKIWREQRVARGGIGQAGSTNKPFRMWIDN WTWRSLGTTPFPGSLTIATDDFSLELATRTGGPFVLNGDKGYQVKHDLESVASFSISAPFLDVKGSMFLEGRRIEVTGNA WLQKEWGSNLFEEGQQGWDWFTFNLDNDKALSISRYRHQSRVPYIFGTLSTSSGKVIPLTEKDVTVYPILYTTLSDGKRI PLQWAIEIPSQDIYVQTKAVQQEMWLPFLIPYWEGPINVAGSKSGRGFMQLTGY >Mature_374_residues MKWLAGKSNNLALMLTFLLAAMVTAAMGFYWSQSATNEAQEYRLNNSLGIQDKTIFEPVLPNKKVSLPEDFKFHEQYQHE WWHYFATLQDEFGQFYTVQFSLFRIATDEREVSGWQNPQLYLANVVLTGKEKIWREQRVARGGIGQAGSTNKPFRMWIDN WTWRSLGTTPFPGSLTIATDDFSLELATRTGGPFVLNGDKGYQVKHDLESVASFSISAPFLDVKGSMFLEGRRIEVTGNA WLQKEWGSNLFEEGQQGWDWFTFNLDNDKALSISRYRHQSRVPYIFGTLSTSSGKVIPLTEKDVTVYPILYTTLSDGKRI PLQWAIEIPSQDIYVQTKAVQQEMWLPFLIPYWEGPINVAGSKSGRGFMQLTGY
Specific function: Unknown
COG id: COG5621
COG function: function code R; Predicted secreted hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42791; Mature: 42791
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWLAGKSNNLALMLTFLLAAMVTAAMGFYWSQSATNEAQEYRLNNSLGIQDKTIFEPVL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEECCCCCCCCCCHHCCCCC PNKKVSLPEDFKFHEQYQHEWWHYFATLQDEFGQFYTVQFSLFRIATDEREVSGWQNPQL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCHHCCCCCCCCE YLANVVLTGKEKIWREQRVARGGIGQAGSTNKPFRMWIDNWTWRSLGTTPFPGSLTIATD EEEEEEEECHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCEEECCCCCCCCCCEEEEEEC DFSLELATRTGGPFVLNGDKGYQVKHDLESVASFSISAPFLDVKGSMFLEGRRIEVTGNA CEEEEEEECCCCCEEEECCCCCEEHHHHHHHHHCCCCCCEEECCCCEEECCEEEEEECCC WLQKEWGSNLFEEGQQGWDWFTFNLDNDKALSISRYRHQSRVPYIFGTLSTSSGKVIPLT EEEHHCCCHHHHCCCCCCEEEEEECCCCCEEEHHHHHHHCCCCEEEEEEECCCCCEEEEC EKDVTVYPILYTTLSDGKRIPLQWAIEIPSQDIYVQTKAVQQEMWLPFLIPYWEGPINVA CCCEEEEEEEEEEECCCCCCCEEEEEECCCCCEEEEHHHHHHHCCCCEEEECCCCCEEEC GSKSGRGFMQLTGY CCCCCCEEEEECCC >Mature Secondary Structure MKWLAGKSNNLALMLTFLLAAMVTAAMGFYWSQSATNEAQEYRLNNSLGIQDKTIFEPVL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEECCCCCCCCCCHHCCCCC PNKKVSLPEDFKFHEQYQHEWWHYFATLQDEFGQFYTVQFSLFRIATDEREVSGWQNPQL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCHHCCCCCCCCE YLANVVLTGKEKIWREQRVARGGIGQAGSTNKPFRMWIDNWTWRSLGTTPFPGSLTIATD EEEEEEEECHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCEEECCCCCCCCCCEEEEEEC DFSLELATRTGGPFVLNGDKGYQVKHDLESVASFSISAPFLDVKGSMFLEGRRIEVTGNA CEEEEEEECCCCCEEEECCCCCEEHHHHHHHHHCCCCCCEEECCCCEEECCEEEEEECCC WLQKEWGSNLFEEGQQGWDWFTFNLDNDKALSISRYRHQSRVPYIFGTLSTSSGKVIPLT EEEHHCCCHHHHCCCCCCEEEEEECCCCCEEEHHHHHHHCCCCEEEEEEECCCCCEEEEC EKDVTVYPILYTTLSDGKRIPLQWAIEIPSQDIYVQTKAVQQEMWLPFLIPYWEGPINVA CCCEEEEEEEEEEECCCCCCCEEEEEECCCCCEEEEHHHHHHHCCCCEEEECCCCCEEEC GSKSGRGFMQLTGY CCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA