Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is 37679517

Identifier: 37679517

GI number: 37679517

Start: 1361250

End: 1361669

Strand: Direct

Name: 37679517

Synonym: VV1333

Alternate gene names: NA

Gene position: 1361250-1361669 (Clockwise)

Preceding gene: 37679516

Following gene: 37679518

Centisome position: 40.58

GC content: 45.71

Gene sequence:

>420_bases
ATGGACGCGATGAAGGTCGGTAATGTGTACCGAGCACTGAATAAAGACAATCTTCACTTACTGGCGGATGTATATCATAG
AAACGTCGTGTTTGAGGATGCTGCACATCGCTTAGAGGGTTGGCAAGCGTTGGAGCTTTACTTTACCAATCTTTATGAAA
ACGTGGTTGACTGCTGTTTCGATATTCATGAGCAGTACCAAATCGACAATGTAGGCTTTCTTACTTGGACGATGACGTTA
CAGCATCCCAAACTCAAAAAAGGGGCCTGTGTCGAGGTTAAAGGCGTTTCACACCTCAAATTTGAAGCGGGGAAGGTGAT
TTACCACCGCGACTATTTTGACCTTGGCGAAATGCTCTATGAAAACCTGCCGTTACTGGGTGGGATCATTCGGGCCATAA
AGCAGAGGTTAGGGCAATGA

Upstream 100 bases:

>100_bases
TAGAAGTTATACAAAAAAACAATCGGTATAACTGCTTACACTAGTCTATGTTTTAAATGTGACTGTTTTTAAAACACTTT
AACCATGGAACAAGGGAAAT

Downstream 100 bases:

>100_bases
ACTCAGTGCTCATTACCGGTGCGACATCGGGGATCGGCAAGAAACTAGCGAAAGATTTTGCTGATGAAGGTGCAAAAGTG
ATCGCATGTGGACGCAATCG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator-Related Protein; Ketosteroid Isomerase-Like Protein; Ketosteroid Isomerase-Related Protein Cystatin Fold

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MDAMKVGNVYRALNKDNLHLLADVYHRNVVFEDAAHRLEGWQALELYFTNLYENVVDCCFDIHEQYQIDNVGFLTWTMTL
QHPKLKKGACVEVKGVSHLKFEAGKVIYHRDYFDLGEMLYENLPLLGGIIRAIKQRLGQ

Sequences:

>Translated_139_residues
MDAMKVGNVYRALNKDNLHLLADVYHRNVVFEDAAHRLEGWQALELYFTNLYENVVDCCFDIHEQYQIDNVGFLTWTMTL
QHPKLKKGACVEVKGVSHLKFEAGKVIYHRDYFDLGEMLYENLPLLGGIIRAIKQRLGQ
>Mature_139_residues
MDAMKVGNVYRALNKDNLHLLADVYHRNVVFEDAAHRLEGWQALELYFTNLYENVVDCCFDIHEQYQIDNVGFLTWTMTL
QHPKLKKGACVEVKGVSHLKFEAGKVIYHRDYFDLGEMLYENLPLLGGIIRAIKQRLGQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16145; Mature: 16145

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAMKVGNVYRALNKDNLHLLADVYHRNVVFEDAAHRLEGWQALELYFTNLYENVVDCCF
CCCCHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
DIHEQYQIDNVGFLTWTMTLQHPKLKKGACVEVKGVSHLKFEAGKVIYHRDYFDLGEMLY
HHHHHHCCCCCEEEEEEEEECCCCCCCCCEEEECCCCEEEECCCEEEEECCHHHHHHHHH
ENLPLLGGIIRAIKQRLGQ
HCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDAMKVGNVYRALNKDNLHLLADVYHRNVVFEDAAHRLEGWQALELYFTNLYENVVDCCF
CCCCHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
DIHEQYQIDNVGFLTWTMTLQHPKLKKGACVEVKGVSHLKFEAGKVIYHRDYFDLGEMLY
HHHHHHCCCCCEEEEEEEEECCCCCCCCCEEEECCCCEEEECCCEEEEECCHHHHHHHHH
ENLPLLGGIIRAIKQRLGQ
HCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA