| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
Click here to switch to the map view.
The map label for this gene is 37679517
Identifier: 37679517
GI number: 37679517
Start: 1361250
End: 1361669
Strand: Direct
Name: 37679517
Synonym: VV1333
Alternate gene names: NA
Gene position: 1361250-1361669 (Clockwise)
Preceding gene: 37679516
Following gene: 37679518
Centisome position: 40.58
GC content: 45.71
Gene sequence:
>420_bases ATGGACGCGATGAAGGTCGGTAATGTGTACCGAGCACTGAATAAAGACAATCTTCACTTACTGGCGGATGTATATCATAG AAACGTCGTGTTTGAGGATGCTGCACATCGCTTAGAGGGTTGGCAAGCGTTGGAGCTTTACTTTACCAATCTTTATGAAA ACGTGGTTGACTGCTGTTTCGATATTCATGAGCAGTACCAAATCGACAATGTAGGCTTTCTTACTTGGACGATGACGTTA CAGCATCCCAAACTCAAAAAAGGGGCCTGTGTCGAGGTTAAAGGCGTTTCACACCTCAAATTTGAAGCGGGGAAGGTGAT TTACCACCGCGACTATTTTGACCTTGGCGAAATGCTCTATGAAAACCTGCCGTTACTGGGTGGGATCATTCGGGCCATAA AGCAGAGGTTAGGGCAATGA
Upstream 100 bases:
>100_bases TAGAAGTTATACAAAAAAACAATCGGTATAACTGCTTACACTAGTCTATGTTTTAAATGTGACTGTTTTTAAAACACTTT AACCATGGAACAAGGGAAAT
Downstream 100 bases:
>100_bases ACTCAGTGCTCATTACCGGTGCGACATCGGGGATCGGCAAGAAACTAGCGAAAGATTTTGCTGATGAAGGTGCAAAAGTG ATCGCATGTGGACGCAATCG
Product: putative transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator-Related Protein; Ketosteroid Isomerase-Like Protein; Ketosteroid Isomerase-Related Protein Cystatin Fold
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MDAMKVGNVYRALNKDNLHLLADVYHRNVVFEDAAHRLEGWQALELYFTNLYENVVDCCFDIHEQYQIDNVGFLTWTMTL QHPKLKKGACVEVKGVSHLKFEAGKVIYHRDYFDLGEMLYENLPLLGGIIRAIKQRLGQ
Sequences:
>Translated_139_residues MDAMKVGNVYRALNKDNLHLLADVYHRNVVFEDAAHRLEGWQALELYFTNLYENVVDCCFDIHEQYQIDNVGFLTWTMTL QHPKLKKGACVEVKGVSHLKFEAGKVIYHRDYFDLGEMLYENLPLLGGIIRAIKQRLGQ >Mature_139_residues MDAMKVGNVYRALNKDNLHLLADVYHRNVVFEDAAHRLEGWQALELYFTNLYENVVDCCFDIHEQYQIDNVGFLTWTMTL QHPKLKKGACVEVKGVSHLKFEAGKVIYHRDYFDLGEMLYENLPLLGGIIRAIKQRLGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16145; Mature: 16145
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAMKVGNVYRALNKDNLHLLADVYHRNVVFEDAAHRLEGWQALELYFTNLYENVVDCCF CCCCHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH DIHEQYQIDNVGFLTWTMTLQHPKLKKGACVEVKGVSHLKFEAGKVIYHRDYFDLGEMLY HHHHHHCCCCCEEEEEEEEECCCCCCCCCEEEECCCCEEEECCCEEEEECCHHHHHHHHH ENLPLLGGIIRAIKQRLGQ HCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MDAMKVGNVYRALNKDNLHLLADVYHRNVVFEDAAHRLEGWQALELYFTNLYENVVDCCF CCCCHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH DIHEQYQIDNVGFLTWTMTLQHPKLKKGACVEVKGVSHLKFEAGKVIYHRDYFDLGEMLY HHHHHHCCCCCEEEEEEEEECCCCCCCCCEEEECCCCEEEECCCEEEEECCHHHHHHHHH ENLPLLGGIIRAIKQRLGQ HCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA