| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37679199
Identifier: 37679199
GI number: 37679199
Start: 1014703
End: 1015200
Strand: Direct
Name: 37679199
Synonym: VV1015
Alternate gene names: NA
Gene position: 1014703-1015200 (Clockwise)
Preceding gene: 37679197
Following gene: 37679203
Centisome position: 30.25
GC content: 43.37
Gene sequence:
>498_bases ATGAACAAGCAACTCGCGAAGATCTACAAACCGGGAATGGTTAAGTTTGCTTTAAACATTTGGCCGCCATTTTGGGGGGC AGGAATTCGCATTTTACGCATAAGTGATGATTTCCGTACGGTTGAAATGAGACTGAAATTGCGCTGGTGGAACAAAAACG CCAATCGTACTCAGTATGGCGGCAGTATTTTCTCTTTAACGGATCCAGTTTACTCATTAATGCTGATGGGGATTTTGGGG GAGGAGTACTATGTCTGGGACAAGGAAGCGAGCATTAACTTTATTCAACCTGGGAAAAGTGATCTCTTTGCTAAGTTTGA GATTTGCCAATCGGTGTTAGATGAGATTTACTCCGTGACCAAGAGAGGGGAGAAGTGCTTTCCTGAATTTGTCATCCATG TCAAAGATGCACAAGGGAATGTGGTTTCGGAAGTTCAGCGTAAGCTGTATGTACGCAAAAAGCCGCAATATCGAGAAGAA GTCATCGTGACAAACTAA
Upstream 100 bases:
>100_bases GGGTTACTATATTCTTTTTGTAAATTCGCGTTAGGTCGCTTATATTGCTCATCTGACCAGTTACAATTTAATAACAATTT GCAAAGAGAGCAAGGAAGGC
Downstream 100 bases:
>100_bases AAAAACCTCCCGAAGGAGGTTTTTCATCATTAGTCTTCAAGCTCTGCGAGGCACATTTCTTCGTAGATCTGTTCAACCCA GTTTTTCACACGTTCTTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MNKQLAKIYKPGMVKFALNIWPPFWGAGIRILRISDDFRTVEMRLKLRWWNKNANRTQYGGSIFSLTDPVYSLMLMGILG EEYYVWDKEASINFIQPGKSDLFAKFEICQSVLDEIYSVTKRGEKCFPEFVIHVKDAQGNVVSEVQRKLYVRKKPQYREE VIVTN
Sequences:
>Translated_165_residues MNKQLAKIYKPGMVKFALNIWPPFWGAGIRILRISDDFRTVEMRLKLRWWNKNANRTQYGGSIFSLTDPVYSLMLMGILG EEYYVWDKEASINFIQPGKSDLFAKFEICQSVLDEIYSVTKRGEKCFPEFVIHVKDAQGNVVSEVQRKLYVRKKPQYREE VIVTN >Mature_165_residues MNKQLAKIYKPGMVKFALNIWPPFWGAGIRILRISDDFRTVEMRLKLRWWNKNANRTQYGGSIFSLTDPVYSLMLMGILG EEYYVWDKEASINFIQPGKSDLFAKFEICQSVLDEIYSVTKRGEKCFPEFVIHVKDAQGNVVSEVQRKLYVRKKPQYREE VIVTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19353; Mature: 19353
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKQLAKIYKPGMVKFALNIWPPFWGAGIRILRISDDFRTVEMRLKLRWWNKNANRTQYG CCCHHHHHHCCCEEEEEEECCCCCCCCCEEEEEECCCCEEEEEEEEEEEECCCCCCEECC GSIFSLTDPVYSLMLMGILGEEYYVWDKEASINFIQPGKSDLFAKFEICQSVLDEIYSVT CEEEEHHHHHHHHHHHHHHCCEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH KRGEKCFPEFVIHVKDAQGNVVSEVQRKLYVRKKPQYREEVIVTN HCCHHCCHHHEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEECC >Mature Secondary Structure MNKQLAKIYKPGMVKFALNIWPPFWGAGIRILRISDDFRTVEMRLKLRWWNKNANRTQYG CCCHHHHHHCCCEEEEEEECCCCCCCCCEEEEEECCCCEEEEEEEEEEEECCCCCCEECC GSIFSLTDPVYSLMLMGILGEEYYVWDKEASINFIQPGKSDLFAKFEICQSVLDEIYSVT CEEEEHHHHHHHHHHHHHHCCEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH KRGEKCFPEFVIHVKDAQGNVVSEVQRKLYVRKKPQYREEVIVTN HCCHHCCHHHEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA