Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is djlA

Identifier: 37678666

GI number: 37678666

Start: 467230

End: 468093

Strand: Direct

Name: djlA

Synonym: VV0482

Alternate gene names: 37678666

Gene position: 467230-468093 (Clockwise)

Preceding gene: 37678659

Following gene: 37678672

Centisome position: 13.93

GC content: 46.76

Gene sequence:

>864_bases
ATGCAGATTTTTGGCAAAATTCTTGGTGCCTTTTTTGGTTTTTTGTTCGGCGGGGTGTTTGGGGCACTGTTCGGTTTATT
TATTGGTCACCAGTTCGACAAAGCACGACGCTTGAGTCAAGCGGGCTTTAAAACCGCAGGTTTTGGCCAAGGGCCAAGTC
AAGCTCAGCGACAAGAGGAGTTTTTTAAGTCCGCTTTTGCTGTTATGGGGCATGTGGCTAAAGCAAAAGGCCAAGTCACC
AAGGAAGAGATCCAACTTGCCAGTGCAATGATGGATCGAATGAGCTTGCATGGCGAACAGCGCAGAGCAGCGCAAGATGC
GTTTCGTGAAGGTAAAGAACGTGATTTCCCTCTGGAACAACTCTTAGAGAGAGTCAAAATTGCCACTAGTGGCCGTTTTG
ATTTATTGCAGTTCTTTTTGGAATTACAGATCTCTGCGGCTTTTGCCGATGGCGATGTGCATCCAAGTGAAAGAAACGTA
TTGCACAAGATTGCGCGAGGTTTAGGATTTTCGTCTGAACAGCTCGAGCGTCGTTTGCAGATGCAAGAAGCGGCATTTCG
TTTCCAACGTCAGGGCGGATTTGGGGGACAACAGCATCAATCTCATCACTCATCTTCTCACGGTGGCTGGCAGCAAGCGT
CGCAAACTGACCGTCTCGCGGATGCCTATAAGATCTTGGGCATTGACGCCAATGCCGATGGCAAAGAGGTGAAGCGCGCT
TATCGTAAGTTAATGAATGAGCACCACCCTGATAAATTGATGGCAAAAGGTCTACCGCCAGAAATGATGAATATGGCGAA
AGAAAAATCGCAAGAAATTCAAAGTGCTTACGATCTTATTAAGAAAGAAAAAGGCTTCAAGTAG

Upstream 100 bases:

>100_bases
CATGGTGAAAAAATGATTGCCTTATCATAAAGGAAATCCGTGCTTCCAGCACTATATGACCGTCAATGACGGGAAAAATT
CATAGATAGAGAACTCACAA

Downstream 100 bases:

>100_bases
CCAACAAAAAAACAGGACGATGAGATCGCCTGTTTTTTCTCATTCATGTAAAAACAGAAAGGCCGTATTTCGGCCTTTCT
GTGTTTATTGGGCTTGGTTG

Product: Dna-J like membrane chaperone protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MQIFGKILGAFFGFLFGGVFGALFGLFIGHQFDKARRLSQAGFKTAGFGQGPSQAQRQEEFFKSAFAVMGHVAKAKGQVT
KEEIQLASAMMDRMSLHGEQRRAAQDAFREGKERDFPLEQLLERVKIATSGRFDLLQFFLELQISAAFADGDVHPSERNV
LHKIARGLGFSSEQLERRLQMQEAAFRFQRQGGFGGQQHQSHHSSSHGGWQQASQTDRLADAYKILGIDANADGKEVKRA
YRKLMNEHHPDKLMAKGLPPEMMNMAKEKSQEIQSAYDLIKKEKGFK

Sequences:

>Translated_287_residues
MQIFGKILGAFFGFLFGGVFGALFGLFIGHQFDKARRLSQAGFKTAGFGQGPSQAQRQEEFFKSAFAVMGHVAKAKGQVT
KEEIQLASAMMDRMSLHGEQRRAAQDAFREGKERDFPLEQLLERVKIATSGRFDLLQFFLELQISAAFADGDVHPSERNV
LHKIARGLGFSSEQLERRLQMQEAAFRFQRQGGFGGQQHQSHHSSSHGGWQQASQTDRLADAYKILGIDANADGKEVKRA
YRKLMNEHHPDKLMAKGLPPEMMNMAKEKSQEIQSAYDLIKKEKGFK
>Mature_287_residues
MQIFGKILGAFFGFLFGGVFGALFGLFIGHQFDKARRLSQAGFKTAGFGQGPSQAQRQEEFFKSAFAVMGHVAKAKGQVT
KEEIQLASAMMDRMSLHGEQRRAAQDAFREGKERDFPLEQLLERVKIATSGRFDLLQFFLELQISAAFADGDVHPSERNV
LHKIARGLGFSSEQLERRLQMQEAAFRFQRQGGFGGQQHQSHHSSSHGGWQQASQTDRLADAYKILGIDANADGKEVKRA
YRKLMNEHHPDKLMAKGLPPEMMNMAKEKSQEIQSAYDLIKKEKGFK

Specific function: Regulatory dnaK co-chaperone. Direct interaction between dnaK and djlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the rcsB/rcsC phosphotransfer sig

COG id: COG1076

COG function: function code O; DnaJ-domain-containing proteins 1

Gene ontology:

Cell location: Cell inner membrane; Single-pass type III membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Escherichia coli, GI1786241, Length=288, Percent_Identity=48.9583333333333, Blast_Score=267, Evalue=6e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001623
- InterPro:   IPR007791
- InterPro:   IPR015609
- InterPro:   IPR003095 [H]

Pfam domain/function: PF00226 DnaJ; PF05099 TerB [H]

EC number: NA

Molecular weight: Translated: 32243; Mature: 32243

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure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HHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA