Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is 37678672

Identifier: 37678672

GI number: 37678672

Start: 474430

End: 475221

Strand: Direct

Name: 37678672

Synonym: VV0488

Alternate gene names: NA

Gene position: 474430-475221 (Clockwise)

Preceding gene: 37678666

Following gene: 37678674

Centisome position: 14.14

GC content: 45.45

Gene sequence:

>792_bases
GTGATGAAGAGAAGGGAGAAGATAATGTCTAATAAATCGGCTTGGTATGCAGTGTTAACATTGAGCTGCTTGACGTTACT
TGGCTGTCAATCAACCAGTACCGAAAGAAAAGTAAGCAGTGTCTCTTCGGCACAATTATCTAAAAATGCAGAAGTATTAC
AACAGCAGCTTGAGTTGACGTTGAGCTCTCAGGAACAGAAAACCTTCCTAACCGCAATGGCGACTTTGTTGGAAAGCGAG
AGTTCTGAAATGGCTGGTGGGGAGGAGAAAGAAGGGCTGAGGGCGTCACAATGGCGTATTGCTTCTTCTGATCCTAAAAC
CAAAACGTTTCTTGTCGGGACAGATATTTACCCAGGGGTAACATTAAAAGGGGAACTGTCGCTACTGGATTTGCCATTCA
GTGCCACCACGGTGGTTAACCTACGCTCAGGTCCATCTGCGAAATCAAATAAAGTAGGGCAGCTGCAAACGGGAGATGTC
TTCATCGCATTGGCAAAAGTCCCCGGCGCACCTTGGTTGTTAGTCGAGAGACAGGGAATGATTGAAGGCTATGTACATCA
AGGTTATGTGCAAAGCCGTATCGAACCGCGTGACATTTTATCGGTGAAGCCCAATGCAGCGTTAACGCCGAAAACCCGAT
CAGCAAGCCAAAAAATATTGTGGACAGGCAGTTATCAATGTCGTGATTTACAGTATCAGCTCAATGGTGCCAATCAGGCT
CGCTCAGGCAATTTGATGGCATGTCGAAAAGACAAAAACATTTGGTATATACAGTCAATCGATCCCAGTTAA

Upstream 100 bases:

>100_bases
AAACGGTGTTCGCCTAGCACTATTGGGCACTAAGAAAATGAAGGTGTACCGATTATTCCGGGTTGGCTGGCGCTTAGCGC
TCGATGGAACAAGAGTTTAA

Downstream 100 bases:

>100_bases
TTTTCGCGATGGCGATTTCTTCTCTTTATTGATCGCAAAGAGAGCACTCTGTTCGTGCTCTCTTCGTTCTTCTCCGCTTC
CTTTGTCCCTCTCGCTATCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MMKRREKIMSNKSAWYAVLTLSCLTLLGCQSTSTERKVSSVSSAQLSKNAEVLQQQLELTLSSQEQKTFLTAMATLLESE
SSEMAGGEEKEGLRASQWRIASSDPKTKTFLVGTDIYPGVTLKGELSLLDLPFSATTVVNLRSGPSAKSNKVGQLQTGDV
FIALAKVPGAPWLLVERQGMIEGYVHQGYVQSRIEPRDILSVKPNAALTPKTRSASQKILWTGSYQCRDLQYQLNGANQA
RSGNLMACRKDKNIWYIQSIDPS

Sequences:

>Translated_263_residues
MMKRREKIMSNKSAWYAVLTLSCLTLLGCQSTSTERKVSSVSSAQLSKNAEVLQQQLELTLSSQEQKTFLTAMATLLESE
SSEMAGGEEKEGLRASQWRIASSDPKTKTFLVGTDIYPGVTLKGELSLLDLPFSATTVVNLRSGPSAKSNKVGQLQTGDV
FIALAKVPGAPWLLVERQGMIEGYVHQGYVQSRIEPRDILSVKPNAALTPKTRSASQKILWTGSYQCRDLQYQLNGANQA
RSGNLMACRKDKNIWYIQSIDPS
>Mature_263_residues
MMKRREKIMSNKSAWYAVLTLSCLTLLGCQSTSTERKVSSVSSAQLSKNAEVLQQQLELTLSSQEQKTFLTAMATLLESE
SSEMAGGEEKEGLRASQWRIASSDPKTKTFLVGTDIYPGVTLKGELSLLDLPFSATTVVNLRSGPSAKSNKVGQLQTGDV
FIALAKVPGAPWLLVERQGMIEGYVHQGYVQSRIEPRDILSVKPNAALTPKTRSASQKILWTGSYQCRDLQYQLNGANQA
RSGNLMACRKDKNIWYIQSIDPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28926; Mature: 28926

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKRREKIMSNKSAWYAVLTLSCLTLLGCQSTSTERKVSSVSSAQLSKNAEVLQQQLELT
CCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH
LSSQEQKTFLTAMATLLESESSEMAGGEEKEGLRASQWRIASSDPKTKTFLVGTDIYPGV
HCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHEEEECCCCCCEEEEEECCCCCCE
TLKGELSLLDLPFSATTVVNLRSGPSAKSNKVGQLQTGDVFIALAKVPGAPWLLVERQGM
EEECCEEEEECCCCCEEEEEECCCCCCCCCCCCEEECCCEEEEEEECCCCCEEEEECCCC
IEGYVHQGYVQSRIEPRDILSVKPNAALTPKTRSASQKILWTGSYQCRDLQYQLNGANQA
HHHHHHHHHHHHCCCHHHEEEECCCCCCCCCCCCCCCEEEEECCCEEEEEEEEECCCCCC
RSGNLMACRKDKNIWYIQSIDPS
CCCCEEEEEECCCEEEEEECCCC
>Mature Secondary Structure
MMKRREKIMSNKSAWYAVLTLSCLTLLGCQSTSTERKVSSVSSAQLSKNAEVLQQQLELT
CCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH
LSSQEQKTFLTAMATLLESESSEMAGGEEKEGLRASQWRIASSDPKTKTFLVGTDIYPGV
HCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHEEEECCCCCCEEEEEECCCCCCE
TLKGELSLLDLPFSATTVVNLRSGPSAKSNKVGQLQTGDVFIALAKVPGAPWLLVERQGM
EEECCEEEEECCCCCEEEEEECCCCCCCCCCCCEEECCCEEEEEEECCCCCEEEEECCCC
IEGYVHQGYVQSRIEPRDILSVKPNAALTPKTRSASQKILWTGSYQCRDLQYQLNGANQA
HHHHHHHHHHHHCCCHHHEEEECCCCCCCCCCCCCCCEEEEECCCEEEEEEEEECCCCCC
RSGNLMACRKDKNIWYIQSIDPS
CCCCEEEEEECCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA