Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is 37678316

Identifier: 37678316

GI number: 37678316

Start: 140561

End: 142738

Strand: Direct

Name: 37678316

Synonym: VV0132

Alternate gene names: NA

Gene position: 140561-142738 (Clockwise)

Preceding gene: 37678315

Following gene: 37678317

Centisome position: 4.19

GC content: 37.88

Gene sequence:

>2178_bases
ATGTTGTCTTTTGATAATTCGCAAGATTTAGAATTAACTTTAGATGCCATGCGCTCCATTGGTGGTCAAAAAGATTATTT
GCAGCAAGTGCTTTTCCCTGCGCTACTGCGAGGTAATTGGGAAGAGTTGGACAAAATGGTGGTTTATCAAGATGAGAGAA
AGACAATCTTGTTTGGGGAAGATGCTTGGATGTTTGCACAGTCTGCATATAAAGGGAAAAATAAGTCAAATATTTATTTT
AATATAGAGTTAGAACAAGGCGAGAACGTCATTGTATTTCGTCAAAACGAACGTCATTTAGTTAATCAAGTGAAGTGTAT
CGCAGTAGCGAATATGTGGTTTTCAGGTCAACATATTGAGTTAGGTTCTCTCTCAAGCAAGATAGGTCTTTTGCGAAATT
ATATTGTTAAACTGTTTAAGCGTGGTATTACTTCTTTTGAAGAGTTAAACCAAGAGCATCTAGACATTTTGGTCGAAGAT
GGATTTTTTGACATGTCTAACTCCAAAGTGTTTACTGGGTTAAACTATCTTCCCGCTTTAAAAGGTTTACTGCCATTTAC
GGTTAATTTTAATCGCCTAACGCATAAAATGTTTAACGCAAGACCTGATGACACTGAAGGAACATTGGTTATTCCTCCGC
GGATATATTTTGCGGCATTAACGGAGTACAGCGAAGGGATTGCAAAAGCCTATGGGTTAAGAGATGAAATCGAACAAGCG
GTTGAGCAGATGCTTTTCTTTTATAAATATGAAGAAAAAAGGAGACTTTTAGATATAAGAAATGGAGAGATATATAAACC
TATAAAGGGTTATGAGAAAAACTGGGAGCGATTCACTCAAGCATTAGAAAACGAGGGAGTTGCTTTAGTCGATAAAGGCA
AAAATCCGCGATGGATGGAAATATTCACCTCTCTTAAAACTCGTATTCTCTTAAAAGATTCACAATTTCACCGTTTTAAT
GTGTATATCGGTGACACTTTCTATGACTGGGGTGAATTTAGACGGTATTTAGTTAGCCTCAGTGCAAAGGCCTCGTGGTT
ATGTTTGGCGTTATCAGGGATGAGGATAGATGAGTTGTATCGAATCAGTCCTGTATATGGGGCGCAGGAAAAGAAGTTTG
ATAAAAATGGCGATGAATCAGGTACCGGCAAGGAACAAATTTACTTTCTAACGACACGCCAATCAAAAATTACACTCAAT
AGTCAAACCAAAAATGATGTTTTTGTTACCACTGAAACTGGTTGGAAAGCCTTTCATGTGCTAAATGCCATTCATACACC
TTATCGAAACAGGTTTGCAGGGAATGACAGTCATAGAATGTTCGCAAACTTGCAAAAGGTTACTTATTTCAAGTCTGTAG
GAAAGTCTGCGTTGGGTAAAGGTGTCATAAATAATTTTAACAAAAACAACGTTGATTTTATTCTGACATTAGATGATATG
GGCTATTTACAAACATCCGATCCAACCCAGACATCTTTTAAACTGGGTGACAAATTTCACTTTACGTGTCATCAGTTGCG
ACGTTCACTTGCATATTACCTAATTGGCTATGAGTTGTGTTCTTTCCCGGCTTTGAAGCAACAGTTGTCGCATTTGTCGA
TGGCGATGACACGCTGGTATGCTCGTAACGCCTTTTCATTTGAAAAAATTTACAGCGAAATTCAAAAAGAGCGGGTCACG
CAACAGGCTAAGATCTTTGCTCGTATATATCAAAAAATGGCAAACCGTGAACGTATTGCAGGGGGTAAAGGTCAAGCAAT
CAGTCGTGAAGGTGAAAGCTATTTTGAAGATGGAGTAAATAAACGTAAGCTGTCAAAGGAGTACTGGATAGATCTGTTGA
CCAACGGTAAGGCTCATTTACATGCTGTGGCTCCTGGTATGTATTGTACTAACACTCAATGCTCAATGCGTATCAATATT
GATTTAACTGAGTGTGTTGACTGTGAGTATGACTTTATTGAAAATGCTGTTTACGCTGAAGTGTCCCGTATGGATGCGAT
GAGAAATATTGAGTTTTTAAAAGAAAACAATGAGTTAAATTCAAGCGCTGCAACCAAATACTATATGCAAGTAAAAGCTG
CTGAAGAAATAATGGATGACTTAGTGTTCGAGCATGATAAGTACGAATTTGAAGAAGATGTGTTGAGTTTGGTTATACCA
ACAAAAACGGTGGCGTAA

Upstream 100 bases:

>100_bases
AAACAATTGAACAAGCTGAAGATTTGTTTGAAGAAAAAGGGCGTTATTTACTTTTCAACTCATTATCTTCTGTTACCCAA
TACCTATAAGGAACATACTT

Downstream 100 bases:

>100_bases
GATATGACAGATGAAACTGGATTAAGCCCGACCGAGAGGCAGTTAAGAGACGCATTAGCACGCCTTGTTGCCAAAAGGCC
AATCCACAGGGAGCTAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Integrase Family Protein; Site-Specific Recombinase Phage Integrase Family Protein

Number of amino acids: Translated: 725; Mature: 725

Protein sequence:

>725_residues
MLSFDNSQDLELTLDAMRSIGGQKDYLQQVLFPALLRGNWEELDKMVVYQDERKTILFGEDAWMFAQSAYKGKNKSNIYF
NIELEQGENVIVFRQNERHLVNQVKCIAVANMWFSGQHIELGSLSSKIGLLRNYIVKLFKRGITSFEELNQEHLDILVED
GFFDMSNSKVFTGLNYLPALKGLLPFTVNFNRLTHKMFNARPDDTEGTLVIPPRIYFAALTEYSEGIAKAYGLRDEIEQA
VEQMLFFYKYEEKRRLLDIRNGEIYKPIKGYEKNWERFTQALENEGVALVDKGKNPRWMEIFTSLKTRILLKDSQFHRFN
VYIGDTFYDWGEFRRYLVSLSAKASWLCLALSGMRIDELYRISPVYGAQEKKFDKNGDESGTGKEQIYFLTTRQSKITLN
SQTKNDVFVTTETGWKAFHVLNAIHTPYRNRFAGNDSHRMFANLQKVTYFKSVGKSALGKGVINNFNKNNVDFILTLDDM
GYLQTSDPTQTSFKLGDKFHFTCHQLRRSLAYYLIGYELCSFPALKQQLSHLSMAMTRWYARNAFSFEKIYSEIQKERVT
QQAKIFARIYQKMANRERIAGGKGQAISREGESYFEDGVNKRKLSKEYWIDLLTNGKAHLHAVAPGMYCTNTQCSMRINI
DLTECVDCEYDFIENAVYAEVSRMDAMRNIEFLKENNELNSSAATKYYMQVKAAEEIMDDLVFEHDKYEFEEDVLSLVIP
TKTVA

Sequences:

>Translated_725_residues
MLSFDNSQDLELTLDAMRSIGGQKDYLQQVLFPALLRGNWEELDKMVVYQDERKTILFGEDAWMFAQSAYKGKNKSNIYF
NIELEQGENVIVFRQNERHLVNQVKCIAVANMWFSGQHIELGSLSSKIGLLRNYIVKLFKRGITSFEELNQEHLDILVED
GFFDMSNSKVFTGLNYLPALKGLLPFTVNFNRLTHKMFNARPDDTEGTLVIPPRIYFAALTEYSEGIAKAYGLRDEIEQA
VEQMLFFYKYEEKRRLLDIRNGEIYKPIKGYEKNWERFTQALENEGVALVDKGKNPRWMEIFTSLKTRILLKDSQFHRFN
VYIGDTFYDWGEFRRYLVSLSAKASWLCLALSGMRIDELYRISPVYGAQEKKFDKNGDESGTGKEQIYFLTTRQSKITLN
SQTKNDVFVTTETGWKAFHVLNAIHTPYRNRFAGNDSHRMFANLQKVTYFKSVGKSALGKGVINNFNKNNVDFILTLDDM
GYLQTSDPTQTSFKLGDKFHFTCHQLRRSLAYYLIGYELCSFPALKQQLSHLSMAMTRWYARNAFSFEKIYSEIQKERVT
QQAKIFARIYQKMANRERIAGGKGQAISREGESYFEDGVNKRKLSKEYWIDLLTNGKAHLHAVAPGMYCTNTQCSMRINI
DLTECVDCEYDFIENAVYAEVSRMDAMRNIEFLKENNELNSSAATKYYMQVKAAEEIMDDLVFEHDKYEFEEDVLSLVIP
TKTVA
>Mature_725_residues
MLSFDNSQDLELTLDAMRSIGGQKDYLQQVLFPALLRGNWEELDKMVVYQDERKTILFGEDAWMFAQSAYKGKNKSNIYF
NIELEQGENVIVFRQNERHLVNQVKCIAVANMWFSGQHIELGSLSSKIGLLRNYIVKLFKRGITSFEELNQEHLDILVED
GFFDMSNSKVFTGLNYLPALKGLLPFTVNFNRLTHKMFNARPDDTEGTLVIPPRIYFAALTEYSEGIAKAYGLRDEIEQA
VEQMLFFYKYEEKRRLLDIRNGEIYKPIKGYEKNWERFTQALENEGVALVDKGKNPRWMEIFTSLKTRILLKDSQFHRFN
VYIGDTFYDWGEFRRYLVSLSAKASWLCLALSGMRIDELYRISPVYGAQEKKFDKNGDESGTGKEQIYFLTTRQSKITLN
SQTKNDVFVTTETGWKAFHVLNAIHTPYRNRFAGNDSHRMFANLQKVTYFKSVGKSALGKGVINNFNKNNVDFILTLDDM
GYLQTSDPTQTSFKLGDKFHFTCHQLRRSLAYYLIGYELCSFPALKQQLSHLSMAMTRWYARNAFSFEKIYSEIQKERVT
QQAKIFARIYQKMANRERIAGGKGQAISREGESYFEDGVNKRKLSKEYWIDLLTNGKAHLHAVAPGMYCTNTQCSMRINI
DLTECVDCEYDFIENAVYAEVSRMDAMRNIEFLKENNELNSSAATKYYMQVKAAEEIMDDLVFEHDKYEFEEDVLSLVIP
TKTVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84140; Mature: 84140

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSFDNSQDLELTLDAMRSIGGQKDYLQQVLFPALLRGNWEELDKMVVYQDERKTILFGE
CCCCCCCCCHHEEHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHCCEEEEECCCCEEEECC
DAWMFAQSAYKGKNKSNIYFNIELEQGENVIVFRQNERHLVNQVKCIAVANMWFSGQHIE
CHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEEECCCHHHHHHHHHHEEEEHEECCCEEE
LGSLSSKIGLLRNYIVKLFKRGITSFEELNQEHLDILVEDGFFDMSNSKVFTGLNYLPAL
ECCHHHHHHHHHHHHHHHHHHHCCHHHHHCHHHEEEEEECCEEECCCCEEEECCCHHHHH
KGLLPFTVNFNRLTHKMFNARPDDTEGTLVIPPRIYFAALTEYSEGIAKAYGLRDEIEQA
HCCCCEEEEHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHH
VEQMLFFYKYEEKRRLLDIRNGEIYKPIKGYEKNWERFTQALENEGVALVDKGKNPRWME
HHHHHHHHHHHHHHHEEECCCCCEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHH
IFTSLKTRILLKDSQFHRFNVYIGDTFYDWGEFRRYLVSLSAKASWLCLALSGMRIDELY
HHHHHHHEEEEECCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHE
RISPVYGAQEKKFDKNGDESGTGKEQIYFLTTRQSKITLNSQTKNDVFVTTETGWKAFHV
EECCCCCCCHHCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCEEEEECCCCHHHHH
LNAIHTPYRNRFAGNDSHRMFANLQKVTYFKSVGKSALGKGVINNFNKNNVDFILTLDDM
HHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHCCHHHCCCCCCCCEEEEEECCC
GYLQTSDPTQTSFKLGDKFHFTCHQLRRSLAYYLIGYELCSFPALKQQLSHLSMAMTRWY
CCEECCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ARNAFSFEKIYSEIQKERVTQQAKIFARIYQKMANRERIAGGKGQAISREGESYFEDGVN
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCHHHHHCCCC
KRKLSKEYWIDLLTNGKAHLHAVAPGMYCTNTQCSMRINIDLTECVDCEYDFIENAVYAE
HHHCCHHHHHHHCCCCCEEEEEECCCCEEECCCEEEEEEEEHHHHCCCCHHHHHHHHHHH
VSRMDAMRNIEFLKENNELNSSAATKYYMQVKAAEEIMDDLVFEHDKYEFEEDVLSLVIP
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEC
TKTVA
CCCCC
>Mature Secondary Structure
MLSFDNSQDLELTLDAMRSIGGQKDYLQQVLFPALLRGNWEELDKMVVYQDERKTILFGE
CCCCCCCCCHHEEHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHCCEEEEECCCCEEEECC
DAWMFAQSAYKGKNKSNIYFNIELEQGENVIVFRQNERHLVNQVKCIAVANMWFSGQHIE
CHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEEECCCHHHHHHHHHHEEEEHEECCCEEE
LGSLSSKIGLLRNYIVKLFKRGITSFEELNQEHLDILVEDGFFDMSNSKVFTGLNYLPAL
ECCHHHHHHHHHHHHHHHHHHHCCHHHHHCHHHEEEEEECCEEECCCCEEEECCCHHHHH
KGLLPFTVNFNRLTHKMFNARPDDTEGTLVIPPRIYFAALTEYSEGIAKAYGLRDEIEQA
HCCCCEEEEHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHH
VEQMLFFYKYEEKRRLLDIRNGEIYKPIKGYEKNWERFTQALENEGVALVDKGKNPRWME
HHHHHHHHHHHHHHHEEECCCCCEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHH
IFTSLKTRILLKDSQFHRFNVYIGDTFYDWGEFRRYLVSLSAKASWLCLALSGMRIDELY
HHHHHHHEEEEECCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHE
RISPVYGAQEKKFDKNGDESGTGKEQIYFLTTRQSKITLNSQTKNDVFVTTETGWKAFHV
EECCCCCCCHHCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCEEEEECCCCHHHHH
LNAIHTPYRNRFAGNDSHRMFANLQKVTYFKSVGKSALGKGVINNFNKNNVDFILTLDDM
HHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHCCHHHCCCCCCCCEEEEEECCC
GYLQTSDPTQTSFKLGDKFHFTCHQLRRSLAYYLIGYELCSFPALKQQLSHLSMAMTRWY
CCEECCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ARNAFSFEKIYSEIQKERVTQQAKIFARIYQKMANRERIAGGKGQAISREGESYFEDGVN
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCHHHHHCCCC
KRKLSKEYWIDLLTNGKAHLHAVAPGMYCTNTQCSMRINIDLTECVDCEYDFIENAVYAE
HHHCCHHHHHHHCCCCCEEEEEECCCCEEECCCEEEEEEEEHHHHCCCCHHHHHHHHHHH
VSRMDAMRNIEFLKENNELNSSAATKYYMQVKAAEEIMDDLVFEHDKYEFEEDVLSLVIP
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEC
TKTVA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA