| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37678317
Identifier: 37678317
GI number: 37678317
Start: 142742
End: 143287
Strand: Direct
Name: 37678317
Synonym: VV0133
Alternate gene names: NA
Gene position: 142742-143287 (Clockwise)
Preceding gene: 37678316
Following gene: 37678323
Centisome position: 4.26
GC content: 38.1
Gene sequence:
>546_bases ATGACAGATGAAACTGGATTAAGCCCGACCGAGAGGCAGTTAAGAGACGCATTAGCACGCCTTGTTGCCAAAAGGCCAAT CCACAGGGAGCTAAAACAGAAGCTTAAAGCCAATAAGTTGAAAATTACTGTTTCAAGTGTCGAGAAGGAAGCTGGATTAT CGAATGGTGTAGTTAAACCTGAACGTTATCCAAAACTAAAGGAAGACATTCTGAGCGCTGAAGCTGCTCGTAAATATGGT CCTGTAAAAGATGTGTCTGATGAAGACATCCATAGGCATCCTTTATACATTAAAGCTAAAAATGATCTAGATAAAGCTAA GGCTGAAATAAAAATGATCAAGGCAGAATTAACGTCGAAAAACTCAAAGTTAGAGAGCTATAAAGAGCGTATAAAAGAGC AAGCAGTAAGAATGCATCAAATGAATGTTGCCATGTGGGGGCAGATTCCTGATGAAAAAAAATATGTTGAGTTGATGATT GATGTTCAAGATATGGGAATGAACAGTAACGTTTTAGACTTTAAAACGCGTGAAAAACTAGATTAG
Upstream 100 bases:
>100_bases TGAAGAAATAATGGATGACTTAGTGTTCGAGCATGATAAGTACGAATTTGAAGAAGATGTGTTGAGTTTGGTTATACCAA CAAAAACGGTGGCGTAAGAT
Downstream 100 bases:
>100_bases TTGTCAGAAGACAATATAGTTTGAACGAGTCCAATAAAGTCTGATCATTTACAATAAAGTTTGTCACTTTTCCTCTGTCA GTTCACTTGGCAGAGGTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MTDETGLSPTERQLRDALARLVAKRPIHRELKQKLKANKLKITVSSVEKEAGLSNGVVKPERYPKLKEDILSAEAARKYG PVKDVSDEDIHRHPLYIKAKNDLDKAKAEIKMIKAELTSKNSKLESYKERIKEQAVRMHQMNVAMWGQIPDEKKYVELMI DVQDMGMNSNVLDFKTREKLD
Sequences:
>Translated_181_residues MTDETGLSPTERQLRDALARLVAKRPIHRELKQKLKANKLKITVSSVEKEAGLSNGVVKPERYPKLKEDILSAEAARKYG PVKDVSDEDIHRHPLYIKAKNDLDKAKAEIKMIKAELTSKNSKLESYKERIKEQAVRMHQMNVAMWGQIPDEKKYVELMI DVQDMGMNSNVLDFKTREKLD >Mature_180_residues TDETGLSPTERQLRDALARLVAKRPIHRELKQKLKANKLKITVSSVEKEAGLSNGVVKPERYPKLKEDILSAEAARKYGP VKDVSDEDIHRHPLYIKAKNDLDKAKAEIKMIKAELTSKNSKLESYKERIKEQAVRMHQMNVAMWGQIPDEKKYVELMID VQDMGMNSNVLDFKTREKLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20814; Mature: 20683
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDETGLSPTERQLRDALARLVAKRPIHRELKQKLKANKLKITVSSVEKEAGLSNGVVKP CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEHHHHHHHCCCCCCCCCC ERYPKLKEDILSAEAARKYGPVKDVSDEDIHRHPLYIKAKNDLDKAKAEIKMIKAELTSK CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCC NSKLESYKERIKEQAVRMHQMNVAMWGQIPDEKKYVELMIDVQDMGMNSNVLDFKTREKL CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHEEEHHHCCCCCCEECCCHHHCC D C >Mature Secondary Structure TDETGLSPTERQLRDALARLVAKRPIHRELKQKLKANKLKITVSSVEKEAGLSNGVVKP CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEHHHHHHHCCCCCCCCCC ERYPKLKEDILSAEAARKYGPVKDVSDEDIHRHPLYIKAKNDLDKAKAEIKMIKAELTSK CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCC NSKLESYKERIKEQAVRMHQMNVAMWGQIPDEKKYVELMIDVQDMGMNSNVLDFKTREKL CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHEEEHHHCCCCCCEECCCHHHCC D C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA