Definition Gloeobacter violaceus PCC 7421 chromosome, complete genome.
Accession NC_005125
Length 4,659,019

Click here to switch to the map view.

The map label for this gene is ycdQ [C]

Identifier: 37523287

GI number: 37523287

Start: 3930005

End: 3931063

Strand: Reverse

Name: ycdQ [C]

Synonym: gll3718

Alternate gene names: 37523287

Gene position: 3931063-3930005 (Counterclockwise)

Preceding gene: 37523288

Following gene: 37523286

Centisome position: 84.38

GC content: 64.49

Gene sequence:

>1059_bases
ATGACGATATTTAGGCAAGCGCGCTTTCCGGTAGTCCATCGGCCACCTTCCAGTGGCGGCGAACCGCTGGTCAGCGTGCT
CATCTGCAATTACAACTACGGCCGCTTCGTCGGTGAAGCGATCGACAGCGTCCTGGAGCAGACCTATCGCAACATCGAAC
TCATCGTGGTAGACGATGGTTCCACCGACGACTCCCGCCAAGTCATCGGTGCGTACAGCGGCAGGCTGAGGGCCGTCTTT
CAGCAAAACGGCGGCCAAGGCGCAGCCTTCAACAGCGGACTGGCCGAGGCCCGCGGCGAGATTGTCTGCTTTTTGGACGC
GGACGATTACTTTCACCGCGAAAAAGTTGCCCGGGTCGTGCGGGCTTTTGCCGAGCACCCCGAATGGGTGCAGCTTGCCC
ACAACTGGATTTCCGTCGACATCGACGGCCGGCCGATGGGCCGCAACCCGGTGCGGCGCTTCACCCGCGGCGATATCCGC
ACGCTGCTGTTGCGCTGGGGCCGCTACGGTTGGGGGATCACCTCCGGACTGAGCTATCGGCGGGTGGTGCTCGAACAGGT
GCTGCCCATCCCCAAGCGTCCGCGCGCCGCGGATACCTATCTGACGGCGACGGTGCCTTTTTATGGCCAGGTGGGCGGGA
TCGCCGACCAGCTGATGTACTACCGGGTGCACGGCAAGAACCGGCGCGCCCGCAGCGACAACCTGCCCTACCTGCTCCAG
CAGCGCGAGGACACCTGCGTCTGCATCAACACCGCTGCCCGCGACTCGGGATTGGCGGAGCGCTTCGACATCCGCTGCGA
CGGAGATTATCGGGGCTTCAAGGCCCTCGAAAGCGGCGGCGGCTCCTGGAGCGATGCCTTCGGAATTTGCTGGTTGTCGC
TGCAGGAATTTGCCGCACTGCGGCGCAAGCCGGCCGAAGCACTCGCCAGACTCGCCCAGCGCCTCGGTTGTGTGCTGTTG
CCGCCCGAGCAGTCCCGGGGGCTGTTGCGCCTCGGGTTGCAGGGCTATGTGCGCTCGCGGCTGTTCGGTGCGCAGGCGTC
TTCGGGAAAAAGCTCCTGA

Upstream 100 bases:

>100_bases
TCGACGCGCGCAACTGCCTCGACCCGCAGCAGGTGGTACAGGCGGGTATGCGTTACTCGGGCGTCGGTCGCTAGCCACAG
GCATCAAGGGAGCGAAATCC

Downstream 100 bases:

>100_bases
ACTTTCCGCCAGGACGAACCACCCAACCGCTTCATTTATTCATGAGGAACAGTCATGGTCAAACGCTTTGCTGCCGCTCT
GCTCGCCGGTGTGCTGGGCG

Product: glucosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MTIFRQARFPVVHRPPSSGGEPLVSVLICNYNYGRFVGEAIDSVLEQTYRNIELIVVDDGSTDDSRQVIGAYSGRLRAVF
QQNGGQGAAFNSGLAEARGEIVCFLDADDYFHREKVARVVRAFAEHPEWVQLAHNWISVDIDGRPMGRNPVRRFTRGDIR
TLLLRWGRYGWGITSGLSYRRVVLEQVLPIPKRPRAADTYLTATVPFYGQVGGIADQLMYYRVHGKNRRARSDNLPYLLQ
QREDTCVCINTAARDSGLAERFDIRCDGDYRGFKALESGGGSWSDAFGICWLSLQEFAALRRKPAEALARLAQRLGCVLL
PPEQSRGLLRLGLQGYVRSRLFGAQASSGKSS

Sequences:

>Translated_352_residues
MTIFRQARFPVVHRPPSSGGEPLVSVLICNYNYGRFVGEAIDSVLEQTYRNIELIVVDDGSTDDSRQVIGAYSGRLRAVF
QQNGGQGAAFNSGLAEARGEIVCFLDADDYFHREKVARVVRAFAEHPEWVQLAHNWISVDIDGRPMGRNPVRRFTRGDIR
TLLLRWGRYGWGITSGLSYRRVVLEQVLPIPKRPRAADTYLTATVPFYGQVGGIADQLMYYRVHGKNRRARSDNLPYLLQ
QREDTCVCINTAARDSGLAERFDIRCDGDYRGFKALESGGGSWSDAFGICWLSLQEFAALRRKPAEALARLAQRLGCVLL
PPEQSRGLLRLGLQGYVRSRLFGAQASSGKSS
>Mature_351_residues
TIFRQARFPVVHRPPSSGGEPLVSVLICNYNYGRFVGEAIDSVLEQTYRNIELIVVDDGSTDDSRQVIGAYSGRLRAVFQ
QNGGQGAAFNSGLAEARGEIVCFLDADDYFHREKVARVVRAFAEHPEWVQLAHNWISVDIDGRPMGRNPVRRFTRGDIRT
LLLRWGRYGWGITSGLSYRRVVLEQVLPIPKRPRAADTYLTATVPFYGQVGGIADQLMYYRVHGKNRRARSDNLPYLLQQ
REDTCVCINTAARDSGLAERFDIRCDGDYRGFKALESGGGSWSDAFGICWLSLQEFAALRRKPAEALARLAQRLGCVLLP
PEQSRGLLRLGLQGYVRSRLFGAQASSGKSS

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787259, Length=131, Percent_Identity=31.2977099236641, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1790044, Length=89, Percent_Identity=37.0786516853933, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 39353; Mature: 39222

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIFRQARFPVVHRPPSSGGEPLVSVLICNYNYGRFVGEAIDSVLEQTYRNIELIVVDDG
CCCCCCCCCCEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEEEECC
STDDSRQVIGAYSGRLRAVFQQNGGQGAAFNSGLAEARGEIVCFLDADDYFHREKVARVV
CCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHCCCCEEEEECCCHHHHHHHHHHHH
RAFAEHPEWVQLAHNWISVDIDGRPMGRNPVRRFTRGDIRTLLLRWGRYGWGITSGLSYR
HHHHCCCHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHH
RVVLEQVLPIPKRPRAADTYLTATVPFYGQVGGIADQLMYYRVHGKNRRARSDNLPYLLQ
HHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHEEEEECCCCCCCCCCCCHHEE
QREDTCVCINTAARDSGLAERFDIRCDGDYRGFKALESGGGSWSDAFGICWLSLQEFAAL
CCCCCEEEEECCCCCCCCHHHEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHH
RRKPAEALARLAQRLGCVLLPPEQSRGLLRLGLQGYVRSRLFGAQASSGKSS
HCCHHHHHHHHHHHCCEEEECCHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TIFRQARFPVVHRPPSSGGEPLVSVLICNYNYGRFVGEAIDSVLEQTYRNIELIVVDDG
CCCCCCCCCEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEEEECC
STDDSRQVIGAYSGRLRAVFQQNGGQGAAFNSGLAEARGEIVCFLDADDYFHREKVARVV
CCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHCCCCEEEEECCCHHHHHHHHHHHH
RAFAEHPEWVQLAHNWISVDIDGRPMGRNPVRRFTRGDIRTLLLRWGRYGWGITSGLSYR
HHHHCCCHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHH
RVVLEQVLPIPKRPRAADTYLTATVPFYGQVGGIADQLMYYRVHGKNRRARSDNLPYLLQ
HHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHEEEEECCCCCCCCCCCCHHEE
QREDTCVCINTAARDSGLAERFDIRCDGDYRGFKALESGGGSWSDAFGICWLSLQEFAAL
CCCCCEEEEECCCCCCCCHHHEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHH
RRKPAEALARLAQRLGCVLLPPEQSRGLLRLGLQGYVRSRLFGAQASSGKSS
HCCHHHHHHHHHHHCCEEEECCHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11759840; 2111805 [H]