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The map label for this gene is yccZ [C]

Identifier: 37523286

GI number: 37523286

Start: 3928979

End: 3929950

Strand: Reverse

Name: yccZ [C]

Synonym: gll3717

Alternate gene names: 37523286

Gene position: 3929950-3928979 (Counterclockwise)

Preceding gene: 37523287

Following gene: 37523285

Centisome position: 84.35

GC content: 66.46

Gene sequence:

>972_bases
ATGGTCAAACGCTTTGCTGCCGCTCTGCTCGCCGGTGTGCTGGGCGGCGCCTGCCTGGCTCCCGGAGCCGTCGCAAGCAC
CCTCAGCGCCTTCGACCGGATCTCGGTGATCGTCACCAACGGCGAAGAATTCAGTTCCCAAAGAGGCGGCCGCGGCGATG
AAGGCTACCTGGTCGGCGCCGACGGCAACATCTTTATCTACCGCCTGGGCAGCATTGCAGCTGCTGGCCGCGAGGAGGTC
GAACTGCAACAGGAGATCACCGAGCGCCTGCGCGAGTACTTCAAGGTGCCCGAGGTGACCGTGCGCCTGATTGGTGTCAG
CCCAATCAACGTCGATGTCGCCGGAGCCGTCTACCGGCCGGGGCTGATTACCGTCAAAGCCAACGGCGACACCCCGAGCG
GCGCTTCCTCGCGGACGGTCTTCAACGCCATCCAGAGCGCGGGCGGCGTGCGGCCGGACGCGGACCTGTCGCGCATCCGC
CTGGAGCGCGCGGGCCAGTCGCTGGTCCTGCCCCCCGGGCAGGACGCCCCGGTGATCTACGGCGACCGCGTCATTATCGA
TCGGCTCGCCGCCGGTCAGGCGCCGGTCCTGCACGTCGCCACCCAACTGACCCCGGCAGAAATTACCGTCTACGTCTCCG
GCACCGACGCGCGCGAAAACCAGGGACCGGTGAAGGTCAAACCCGGCACGACCCTATCGGGGGCGCTGACCGCTGCCGGC
ATCTCAGGAGAATCCTACCTGCGCGAGGGCCGCAAAGTGGCGCTCATCCGCCGCGACCCGGTCGAAGGCAAGCGCGAGGT
GACCTCCTACGACATTGCCGGAGTGATGGGCGGTGAGAGCGACCCGCCCTTGTGGGACGGCGACGCGATTGCGATCACCG
CCGGTCCTTCCCAGAACACGATGGGCTTTTTGGACATGCTCAGCCCCCTGCTCAATCCTTTGGGATTCATGCTTCGCGCC
TTTATCCGCTGA

Upstream 100 bases:

>100_bases
CTCGCGGCTGTTCGGTGCGCAGGCGTCTTCGGGAAAAAGCTCCTGAACTTTCCGCCAGGACGAACCACCCAACCGCTTCA
TTTATTCATGAGGAACAGTC

Downstream 100 bases:

>100_bases
CGGAGAAACAACCATGCACGTAATTCAGGTTCTCAAGCGGCACTGGCGGCCGTTGCTGGTGCTCAATGGCCTGGTGCTGG
CAGCCACGATCGGGGTGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Polysaccharide Export Outer Membrane Protein; Cold Shock Protein; Polysaccharide Biosynthesis/Export Protein; Polysaccharide Export Periplasmic Protein; Amylovoran Export Outer Membrane Protein AmsH

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MVKRFAAALLAGVLGGACLAPGAVASTLSAFDRISVIVTNGEEFSSQRGGRGDEGYLVGADGNIFIYRLGSIAAAGREEV
ELQQEITERLREYFKVPEVTVRLIGVSPINVDVAGAVYRPGLITVKANGDTPSGASSRTVFNAIQSAGGVRPDADLSRIR
LERAGQSLVLPPGQDAPVIYGDRVIIDRLAAGQAPVLHVATQLTPAEITVYVSGTDARENQGPVKVKPGTTLSGALTAAG
ISGESYLREGRKVALIRRDPVEGKREVTSYDIAGVMGGESDPPLWDGDAIAITAGPSQNTMGFLDMLSPLLNPLGFMLRA
FIR

Sequences:

>Translated_323_residues
MVKRFAAALLAGVLGGACLAPGAVASTLSAFDRISVIVTNGEEFSSQRGGRGDEGYLVGADGNIFIYRLGSIAAAGREEV
ELQQEITERLREYFKVPEVTVRLIGVSPINVDVAGAVYRPGLITVKANGDTPSGASSRTVFNAIQSAGGVRPDADLSRIR
LERAGQSLVLPPGQDAPVIYGDRVIIDRLAAGQAPVLHVATQLTPAEITVYVSGTDARENQGPVKVKPGTTLSGALTAAG
ISGESYLREGRKVALIRRDPVEGKREVTSYDIAGVMGGESDPPLWDGDAIAITAGPSQNTMGFLDMLSPLLNPLGFMLRA
FIR
>Mature_323_residues
MVKRFAAALLAGVLGGACLAPGAVASTLSAFDRISVIVTNGEEFSSQRGGRGDEGYLVGADGNIFIYRLGSIAAAGREEV
ELQQEITERLREYFKVPEVTVRLIGVSPINVDVAGAVYRPGLITVKANGDTPSGASSRTVFNAIQSAGGVRPDADLSRIR
LERAGQSLVLPPGQDAPVIYGDRVIIDRLAAGQAPVLHVATQLTPAEITVYVSGTDARENQGPVKVKPGTTLSGALTAAG
ISGESYLREGRKVALIRRDPVEGKREVTSYDIAGVMGGESDPPLWDGDAIAITAGPSQNTMGFLDMLSPLLNPLGFMLRA
FIR

Specific function: May Be Involved In Polysaccharide Transport. [C]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Integral Membrane Protein. Outer Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33887; Mature: 33887

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKRFAAALLAGVLGGACLAPGAVASTLSAFDRISVIVTNGEEFSSQRGGRGDEGYLVGA
CHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHEEEEEEECCHHHHHHCCCCCCCCEEEEC
DGNIFIYRLGSIAAAGREEVELQQEITERLREYFKVPEVTVRLIGVSPINVDVAGAVYRP
CCCEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEECCEEECC
GLITVKANGDTPSGASSRTVFNAIQSAGGVRPDADLSRIRLERAGQSLVLPPGQDAPVIY
CEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEECCCCCCCEEE
GDRVIIDRLAAGQAPVLHVATQLTPAEITVYVSGTDARENQGPVKVKPGTTLSGALTAAG
CCHHEEHHHHCCCCCEEEHHHCCCCEEEEEEEECCCCCCCCCCEEECCCCCCCCCCEECC
ISGESYLREGRKVALIRRDPVEGKREVTSYDIAGVMGGESDPPLWDGDAIAITAGPSQNT
CCCHHHHHCCCEEEEEECCCCCCCHHHHHEEEEEECCCCCCCCCCCCCEEEEEECCCCCC
MGFLDMLSPLLNPLGFMLRAFIR
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVKRFAAALLAGVLGGACLAPGAVASTLSAFDRISVIVTNGEEFSSQRGGRGDEGYLVGA
CHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHEEEEEEECCHHHHHHCCCCCCCCEEEEC
DGNIFIYRLGSIAAAGREEVELQQEITERLREYFKVPEVTVRLIGVSPINVDVAGAVYRP
CCCEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEECCEEECC
GLITVKANGDTPSGASSRTVFNAIQSAGGVRPDADLSRIRLERAGQSLVLPPGQDAPVIY
CEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEECCCCCCCEEE
GDRVIIDRLAAGQAPVLHVATQLTPAEITVYVSGTDARENQGPVKVKPGTTLSGALTAAG
CCHHEEHHHHCCCCCEEEHHHCCCCEEEEEEEECCCCCCCCCCEEECCCCCCCCCCEECC
ISGESYLREGRKVALIRRDPVEGKREVTSYDIAGVMGGESDPPLWDGDAIAITAGPSQNT
CCCHHHHHCCCEEEEEECCCCCCCHHHHHEEEEEECCCCCCCCCCCCCEEEEEECCCCCC
MGFLDMLSPLLNPLGFMLRAFIR
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA