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The map label for this gene is tonB2 [H]

Identifier: 37521973

GI number: 37521973

Start: 2562721

End: 2563491

Strand: Direct

Name: tonB2 [H]

Synonym: glr2404

Alternate gene names: 37521973

Gene position: 2562721-2563491 (Clockwise)

Preceding gene: 37521972

Following gene: 37521975

Centisome position: 55.01

GC content: 65.5

Gene sequence:

>771_bases
ATGCAACCCGGATCGCTATGGCAACGGACACCGAGTGACGACGACGGTGGCCTCAAACTCATCCTCGCCTGCGTGGTAGG
CTCCGCCCTCCTCCACGCCGGACTGTTCGCCCTCAAACTGCCCGAACCGAAGCCTCCCGAAATCCCCAAGGCCCAAAAAA
TGGTCATGGTCGAGACGGCTCCCAAACTGCCGCCTCCCAAACCAAAAGTCGAACCGCCCAAACCGAAACCGCCCGAACCG
AAGAGCTTCTCCAGAAAGCCCGTTCCCAAAAAGAGCGCCCCCCAAAAGGCCAAAGCCTCGCGGACGATCCTCTCTTCCAA
GGCGGTGAGCGCCGATGCGGGCACAGTCAGCGAAAACCAACTGGCCGGTTCGCGCGGCACCGGCTACGGCACCGAAAAGG
GCGACGATTTTGGCAGCATTGCGCCTCTGGGTGTCGATGGCGGCAGCGGCGGGACGGACGTGGTGGAGACGCCGCCGCCG
CCCCCACCGCCGCCGCCGCCGTTGGTGAACGCCCGTCCGAAGGGGGCGGTGCAGCCGGAGTACCCGGAAATCGCCCAGCA
GAACAACTGGGAAGGTCGGGTGATCGTCAAGGCTTACATCAACGCGGACGGTTCGGTGGGCGAGGTGCAGGTGGCCAAAT
CTTCCGGGCACAGCGAGTTGGACAATGCGGCGCTGGCGGCGGTGCGCAACACGAAGTTCGAGCCGGCGCGGCGGGGGGAG
GAGTCGGTGGGGGCGTGGGTGCGCATCCCGGTCACCTTCTCCCTGCAGTAG

Upstream 100 bases:

>100_bases
GAACTTGACAAAGACCCCAACCGGATGGTGGTAGTGGCCGGCAGCAAGGAGGCGGAGTACCAGTACGTTGTATTCGTACT
CGATGAACTCAGGAAGGTCA

Downstream 100 bases:

>100_bases
CTCTCCCCCTTCAAGCGGGTGCAGGGGGGGAGCCAATCCTCCCCTTTTCGATCGTGAGCACCGTCGCCGACTGTAGCCAC
TGACTATCAAACAAACTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MQPGSLWQRTPSDDDGGLKLILACVVGSALLHAGLFALKLPEPKPPEIPKAQKMVMVETAPKLPPPKPKVEPPKPKPPEP
KSFSRKPVPKKSAPQKAKASRTILSSKAVSADAGTVSENQLAGSRGTGYGTEKGDDFGSIAPLGVDGGSGGTDVVETPPP
PPPPPPPLVNARPKGAVQPEYPEIAQQNNWEGRVIVKAYINADGSVGEVQVAKSSGHSELDNAALAAVRNTKFEPARRGE
ESVGAWVRIPVTFSLQ

Sequences:

>Translated_256_residues
MQPGSLWQRTPSDDDGGLKLILACVVGSALLHAGLFALKLPEPKPPEIPKAQKMVMVETAPKLPPPKPKVEPPKPKPPEP
KSFSRKPVPKKSAPQKAKASRTILSSKAVSADAGTVSENQLAGSRGTGYGTEKGDDFGSIAPLGVDGGSGGTDVVETPPP
PPPPPPPLVNARPKGAVQPEYPEIAQQNNWEGRVIVKAYINADGSVGEVQVAKSSGHSELDNAALAAVRNTKFEPARRGE
ESVGAWVRIPVTFSLQ
>Mature_256_residues
MQPGSLWQRTPSDDDGGLKLILACVVGSALLHAGLFALKLPEPKPPEIPKAQKMVMVETAPKLPPPKPKVEPPKPKPPEP
KSFSRKPVPKKSAPQKAKASRTILSSKAVSADAGTVSENQLAGSRGTGYGTEKGDDFGSIAPLGVDGGSGGTDVVETPPP
PPPPPPPLVNARPKGAVQPEYPEIAQQNNWEGRVIVKAYINADGSVGEVQVAKSSGHSELDNAALAAVRNTKFEPARRGE
ESVGAWVRIPVTFSLQ

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003538
- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 26825; Mature: 26825

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPGSLWQRTPSDDDGGLKLILACVVGSALLHAGLFALKLPEPKPPEIPKAQKMVMVETA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCEEEEEECC
PKLPPPKPKVEPPKPKPPEPKSFSRKPVPKKSAPQKAKASRTILSSKAVSADAGTVSENQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHH
LAGSRGTGYGTEKGDDFGSIAPLGVDGGSGGTDVVETPPPPPPPPPPLVNARPKGAVQPE
CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
YPEIAQQNNWEGRVIVKAYINADGSVGEVQVAKSSGHSELDNAALAAVRNTKFEPARRGE
CHHHHHCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHCCH
ESVGAWVRIPVTFSLQ
HHCCCEEEEEEEEECC
>Mature Secondary Structure
MQPGSLWQRTPSDDDGGLKLILACVVGSALLHAGLFALKLPEPKPPEIPKAQKMVMVETA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCEEEEEECC
PKLPPPKPKVEPPKPKPPEPKSFSRKPVPKKSAPQKAKASRTILSSKAVSADAGTVSENQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHH
LAGSRGTGYGTEKGDDFGSIAPLGVDGGSGGTDVVETPPPPPPPPPPLVNARPKGAVQPE
CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
YPEIAQQNNWEGRVIVKAYINADGSVGEVQVAKSSGHSELDNAALAAVRNTKFEPARRGE
CHHHHHCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHCCH
ESVGAWVRIPVTFSLQ
HHCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10689178; 10984043 [H]