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The map label for this gene is 37521972

Identifier: 37521972

GI number: 37521972

Start: 2562336

End: 2562758

Strand: Direct

Name: 37521972

Synonym: glr2403

Alternate gene names: NA

Gene position: 2562336-2562758 (Clockwise)

Preceding gene: 37521971

Following gene: 37521973

Centisome position: 55.0

GC content: 58.39

Gene sequence:

>423_bases
ATGACGGTCAAGCTCAGCGACAGCGACGAAGAGGGCGGGTCGGCAGGCGAGATTAACGTCGTACCGCTCATCGACGTGCT
GTTTTCGATTTTGACGTTTTTTGTGCTGGCGTCGATCTTTCTGACCACCCAGCAGGGGCTGCCGCTGGATCTGCCCAAGG
TGGCTCCGTCCGACCAGCAGCAGGTGCTCAGCCAGCAGCTGACGCTCACCATCACCGACAAGGGCAAATACCTCCTGGAT
AAGGAGCCCATCGAGCTAGCGAAGGTCGGCCCGACGGTCAAGGCTGAACTTGACAAAGACCCCAACCGGATGGTGGTAGT
GGCCGGCAGCAAGGAGGCGGAGTACCAGTACGTTGTATTCGTACTCGATGAACTCAGGAAGGTCAATGCAACCCGGATCG
CTATGGCAACGGACACCGAGTGA

Upstream 100 bases:

>100_bases
TGTTTCGGGCGTTGGCCCGCCGTCAGATTGTGCTGATGGAGACGGCGGGGACGCAGCTGGAGTTGCGCTGGCGGATGGCG
GAGACCGAGGGAGTGAAGCG

Downstream 100 bases:

>100_bases
CGACGACGGTGGCCTCAAACTCATCCTCGCCTGCGTGGTAGGCTCCGCCCTCCTCCACGCCGGACTGTTCGCCCTCAAAC
TGCCCGAACCGAAGCCTCCC

Product: biopolymer transport ExbD protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MTVKLSDSDEEGGSAGEINVVPLIDVLFSILTFFVLASIFLTTQQGLPLDLPKVAPSDQQQVLSQQLTLTITDKGKYLLD
KEPIELAKVGPTVKAELDKDPNRMVVVAGSKEAEYQYVVFVLDELRKVNATRIAMATDTE

Sequences:

>Translated_140_residues
MTVKLSDSDEEGGSAGEINVVPLIDVLFSILTFFVLASIFLTTQQGLPLDLPKVAPSDQQQVLSQQLTLTITDKGKYLLD
KEPIELAKVGPTVKAELDKDPNRMVVVAGSKEAEYQYVVFVLDELRKVNATRIAMATDTE
>Mature_139_residues
TVKLSDSDEEGGSAGEINVVPLIDVLFSILTFFVLASIFLTTQQGLPLDLPKVAPSDQQQVLSQQLTLTITDKGKYLLDK
EPIELAKVGPTVKAELDKDPNRMVVVAGSKEAEYQYVVFVLDELRKVNATRIAMATDTE

Specific function: Unknown

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 15326; Mature: 15195

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVKLSDSDEEGGSAGEINVVPLIDVLFSILTFFVLASIFLTTQQGLPLDLPKVAPSDQQ
CEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
QVLSQQLTLTITDKGKYLLDKEPIELAKVGPTVKAELDKDPNRMVVVAGSKEAEYQYVVF
HHHHCCEEEEEECCCCEEECCCCCCHHHCCCCEEEECCCCCCEEEEEECCCCCCEEEEEE
VLDELRKVNATRIAMATDTE
EEHHHHHCCCEEEEEEECCC
>Mature Secondary Structure 
TVKLSDSDEEGGSAGEINVVPLIDVLFSILTFFVLASIFLTTQQGLPLDLPKVAPSDQQ
EEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
QVLSQQLTLTITDKGKYLLDKEPIELAKVGPTVKAELDKDPNRMVVVAGSKEAEYQYVVF
HHHHCCEEEEEECCCCEEECCCCCCHHHCCCCEEEECCCCCCEEEEEECCCCCCEEEEEE
VLDELRKVNATRIAMATDTE
EEHHHHHCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]