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The map label for this gene is psbV

Identifier: 37521906

GI number: 37521906

Start: 2499587

End: 2500138

Strand: Reverse

Name: psbV

Synonym: gvip320

Alternate gene names: 37521906

Gene position: 2500138-2499587 (Counterclockwise)

Preceding gene: 37521907

Following gene: 37521904

Centisome position: 53.66

GC content: 62.32

Gene sequence:

>552_bases
ATGACGTTCGGGCATTGTCGGCGTGCCTCGACTTTGCGCAGCGCCTTTGTATTGGGCCTGTGCGGCCTGCTGCTTGCGGG
TTGTAGCGGTGCAGACGACGACAGGGACGCCGCCGCACTCAAAGACAAGTACGTCACCGTCAACCTGGGGGTGCGTGGAC
CGGTGGACCTGCCGGCCGACGGGGTGGGCAATTTGCAGACTTTCAGCCCCCAGCAGATCTACGCCGGCAAGAAACTGTTC
GAATCGAACTGCCAGAACTGCCACGTGGGGGGCACCACCACGCCCAACCCCAAAGTCTCGTTGGCGCTTGCCAAGCTGCA
GGGAGCCACCCCCCCACGGGACAACATTCAGTCTCTGGTGCAGTACATGCGCCTGCCGATGAGCTACGACGGCAGCGAGG
AGACTTTCAACTGCCGCAAGAGCGACTGGATCGAAGACGACGAAGCTCAGAATCTGGCCGCGTTTATTCTGCGCGCCTCC
CAGAAGGCCAGGGGTTGGGGAACCGCGCGTCTGGAAGCCAACCAGGATTCGATGACGACGGCACCGCCGTAA

Upstream 100 bases:

>100_bases
TGCCGGGCACATTATCAAAGAAGCGACCTCCAACCCCAACTGGGGCCAGGGCAAGGACACCCGCTAGCTCGGGCACTCTA
TAGATACAGGGGGAATCTTT

Downstream 100 bases:

>100_bases
CGCCTCAGCGTACCTGCGGGCGTCGGTCCGCAGCGCCCGCCACCGGCGGGGCGGCCTCGATGCGGTAGGAACCTTCCAGC
ACGAGCATGCCGGGGGTCAG

Product: cytochrome c-550

Products: NA

Alternate protein names: Cytochrome c550 1; Low-potential cytochrome c 1

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MTFGHCRRASTLRSAFVLGLCGLLLAGCSGADDDRDAAALKDKYVTVNLGVRGPVDLPADGVGNLQTFSPQQIYAGKKLF
ESNCQNCHVGGTTTPNPKVSLALAKLQGATPPRDNIQSLVQYMRLPMSYDGSEETFNCRKSDWIEDDEAQNLAAFILRAS
QKARGWGTARLEANQDSMTTAPP

Sequences:

>Translated_183_residues
MTFGHCRRASTLRSAFVLGLCGLLLAGCSGADDDRDAAALKDKYVTVNLGVRGPVDLPADGVGNLQTFSPQQIYAGKKLF
ESNCQNCHVGGTTTPNPKVSLALAKLQGATPPRDNIQSLVQYMRLPMSYDGSEETFNCRKSDWIEDDEAQNLAAFILRAS
QKARGWGTARLEANQDSMTTAPP
>Mature_182_residues
TFGHCRRASTLRSAFVLGLCGLLLAGCSGADDDRDAAALKDKYVTVNLGVRGPVDLPADGVGNLQTFSPQQIYAGKKLFE
SNCQNCHVGGTTTPNPKVSLALAKLQGATPPRDNIQSLVQYMRLPMSYDGSEETFNCRKSDWIEDDEAQNLAAFILRASQ
KARGWGTARLEANQDSMTTAPP

Specific function: Low-potential cytochrome c that plays a role in the oxygen-evolving complex of photosystem II (Potential)

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Periplasmic side. Note=Associated with photosystem II at the periplasmic side of the inner membrane (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family. PsbV subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): C5501_GLOVI (Q7NI47)

Other databases:

- EMBL:   BA000045
- RefSeq:   NP_925283.1
- HSSP:   P0A386
- ProteinModelPortal:   Q7NI47
- SMR:   Q7NI47
- GeneID:   2600739
- GenomeReviews:   BA000045_GR
- NMPDR:   fig|251221.1.peg.2337
- HOGENOM:   HBG285698
- OMA:   NCKNCHV
- ProtClustDB:   PRK13621
- BioCyc:   GVIO251221:GLL2337-MONOMER
- GO:   GO:0015979
- GO:   GO:0006810
- HAMAP:   MF_01378
- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR016003
- InterPro:   IPR017490
- Gene3D:   G3DSA:1.10.760.10
- PIRSF:   PIRSF005890
- TIGRFAMs:   TIGR03046

Pfam domain/function: PF00034 Cytochrom_C; SSF46626 Cytochrome_c

EC number: NA

Molecular weight: Translated: 19725; Mature: 19594

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: PS51007 CYTC; PS00013 PROKAR_LIPOPROTEIN

Important sites: BINDING 84-84 BINDING 87-87

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFGHCRRASTLRSAFVLGLCGLLLAGCSGADDDRDAAALKDKYVTVNLGVRGPVDLPAD
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCC
GVGNLQTFSPQQIYAGKKLFESNCQNCHVGGTTTPNPKVSLALAKLQGATPPRDNIQSLV
CCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHH
QYMRLPMSYDGSEETFNCRKSDWIEDDEAQNLAAFILRASQKARGWGTARLEANQDSMTT
HHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC
APP
CCC
>Mature Secondary Structure 
TFGHCRRASTLRSAFVLGLCGLLLAGCSGADDDRDAAALKDKYVTVNLGVRGPVDLPAD
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCC
GVGNLQTFSPQQIYAGKKLFESNCQNCHVGGTTTPNPKVSLALAKLQGATPPRDNIQSLV
CCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHH
QYMRLPMSYDGSEETFNCRKSDWIEDDEAQNLAAFILRASQKARGWGTARLEANQDSMTT
HHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC
APP
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14621292