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The map label for this gene is psbV2

Identifier: 37521907

GI number: 37521907

Start: 2500172

End: 2500672

Strand: Reverse

Name: psbV2

Synonym: gvip320.1

Alternate gene names: 37521907

Gene position: 2500672-2500172 (Counterclockwise)

Preceding gene: 37521908

Following gene: 37521906

Centisome position: 53.67

GC content: 65.27

Gene sequence:

>501_bases
ATGTTTAGCAGGCAGTTCGGACGGCTAGCGACCCTAGCCCTTGCCCTGGCCGTGGCCGGTTGTGCCGGCGGCGAGCAGAG
CACCACCGCTGAAGCACCCAGCGAGCCCGCCCCGGTCGCCAAACCGGACGTGGTCTCCGCCGCCACCGGTGAGCTTTCAA
ACTTCAGCACCGCCGATCTCAAACAGGCGAAAAAGCTGTTCCAGGCCGAGTGCGGGCGCTGCCACGTCGGCGGCCAGACC
TACGGCACCTACAACAGCACCGACGTCAGCCTGTCCTACGACGCGCTGACCAATGCCACCCCGCCGCGCAACACCGTCGC
CGGCCTGGTCGATTACATGAAAAAGCCGACGAGCTACGACGGCCGGACCGACCTGCTAAAGACGGGCGAGCACGCCTCCT
TCACGGGTCTGGGCGACGAAAAGCTGCGGCTGATTGCCGGGCACATTATCAAAGAAGCGACCTCCAACCCCAACTGGGGC
CAGGGCAAGGACACCCGCTAG

Upstream 100 bases:

>100_bases
CCCTCGAGGACGCCAAGCGTATCATCCTGGAGGTGCGCAACCACCCCCGTGTCGAGCTGATCGAGGAACCCCGCAGTTGA
AGAGGAGAACTAAGCATTCT

Downstream 100 bases:

>100_bases
CTCGGGCACTCTATAGATACAGGGGGAATCTTTATGACGTTCGGGCATTGTCGGCGTGCCTCGACTTTGCGCAGCGCCTT
TGTATTGGGCCTGTGCGGCC

Product: cytochrome c550

Products: NA

Alternate protein names: Cytochrome c550 2; Low-potential cytochrome c 2

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MFSRQFGRLATLALALAVAGCAGGEQSTTAEAPSEPAPVAKPDVVSAATGELSNFSTADLKQAKKLFQAECGRCHVGGQT
YGTYNSTDVSLSYDALTNATPPRNTVAGLVDYMKKPTSYDGRTDLLKTGEHASFTGLGDEKLRLIAGHIIKEATSNPNWG
QGKDTR

Sequences:

>Translated_166_residues
MFSRQFGRLATLALALAVAGCAGGEQSTTAEAPSEPAPVAKPDVVSAATGELSNFSTADLKQAKKLFQAECGRCHVGGQT
YGTYNSTDVSLSYDALTNATPPRNTVAGLVDYMKKPTSYDGRTDLLKTGEHASFTGLGDEKLRLIAGHIIKEATSNPNWG
QGKDTR
>Mature_166_residues
MFSRQFGRLATLALALAVAGCAGGEQSTTAEAPSEPAPVAKPDVVSAATGELSNFSTADLKQAKKLFQAECGRCHVGGQT
YGTYNSTDVSLSYDALTNATPPRNTVAGLVDYMKKPTSYDGRTDLLKTGEHASFTGLGDEKLRLIAGHIIKEATSNPNWG
QGKDTR

Specific function: Low-potential cytochrome c that plays a role in the oxygen-evolving complex of photosystem II (Potential)

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Periplasmic side. Note=Associated with photosystem II at the periplasmic side of the inner membrane (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family. PsbV subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): C5502_GLOVI (Q7NI46)

Other databases:

- EMBL:   BA000045
- RefSeq:   NP_925284.1
- HSSP:   P0A386
- ProteinModelPortal:   Q7NI46
- SMR:   Q7NI46
- GeneID:   3247905
- GenomeReviews:   BA000045_GR
- NMPDR:   fig|251221.1.peg.2338
- HOGENOM:   HBG285698
- OMA:   HVGGQTY
- BioCyc:   GVIO251221:GLL2338-MONOMER
- GO:   GO:0015979
- GO:   GO:0006810
- HAMAP:   MF_01378
- InterPro:   IPR009056
- InterPro:   IPR016003
- Gene3D:   G3DSA:1.10.760.10
- PIRSF:   PIRSF005890

Pfam domain/function: SSF46626 Cytochrome_c

EC number: NA

Molecular weight: Translated: 17470; Mature: 17470

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: PS51007 CYTC; PS00013 PROKAR_LIPOPROTEIN

Important sites: BINDING 71-71 BINDING 74-74

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSRQFGRLATLALALAVAGCAGGEQSTTAEAPSEPAPVAKPDVVSAATGELSNFSTADL
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHH
KQAKKLFQAECGRCHVGGQTYGTYNSTDVSLSYDALTNATPPRNTVAGLVDYMKKPTSYD
HHHHHHHHHHCCEEEECCCCCCCCCCCCEEEEHHHHCCCCCCHHHHHHHHHHHHCCCCCC
GRTDLLKTGEHASFTGLGDEKLRLIAGHIIKEATSNPNWGQGKDTR
CCHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MFSRQFGRLATLALALAVAGCAGGEQSTTAEAPSEPAPVAKPDVVSAATGELSNFSTADL
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHH
KQAKKLFQAECGRCHVGGQTYGTYNSTDVSLSYDALTNATPPRNTVAGLVDYMKKPTSYD
HHHHHHHHHHCCEEEECCCCCCCCCCCCEEEEHHHHCCCCCCHHHHHHHHHHHHCCCCCC
GRTDLLKTGEHASFTGLGDEKLRLIAGHIIKEATSNPNWGQGKDTR
CCHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14621292