| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is lpxA [H]
Identifier: 37521436
GI number: 37521436
Start: 1988452
End: 1989309
Strand: Direct
Name: lpxA [H]
Synonym: glr1867
Alternate gene names: 37521436
Gene position: 1988452-1989309 (Clockwise)
Preceding gene: 37521435
Following gene: 37521437
Centisome position: 42.68
GC content: 67.83
Gene sequence:
>858_bases ATGAATCCACCCGCCTTGACGACACCTTTGATCCACCCCTCGGCCGTCATTCACCCGCGGGCTGTCCTGCACGAGAGCGT CCAGGTCGGCCCGTTTGCGGTGGTGGGTGAGCACGTGCGCATCGGGGCGGGCACGGTGGTCGGTCCCCACGCCGTGATCG ACGGCTGGACGGAGATTGGCTGCGACAACGTCATCTATAACGGCGCCAGCATCGGCACCCCGCCCCAGGATCTCAAGTAC CGCAACGAACCCTCGCGGGTGCGCATCGGCGACAACAACGACATCCGCGAATTTGTCACCGTCAACCGCGGCACCGACAA GGGCAGCGAGACCGTCGTGGGCGACAAGAATCTGTTGATGGCCTACGTGCACGTCGGCCACAACTGCGCCATCGGCGACA ATGTCGTGATCACCAACGCCGTGATGCTCGCCGGGCATGTGCACATCGAGTCGCAGGCGCGCATCGGCGGCCTGGTGGGC GTCCACCAGTTCGTGCACATCGGCAGGCTCGCCTACATCGGCGGCATGGCCCGCGTCGACCGCGACGTGCCGCCTTTTAC GCTGGTGGAGGGCCACCCGGGCCGCACCCGCGGCCTCAACTGGGTGGGTCTCGAGCGCGCCGGCATCTCCGACGCCGCCG GGGCCGACCGCGAGAGCTACCGGCTGTTGCGCCAGGCCTACAAGTTGCTCTACCGCTCCGCCACGCCCCTCGAAAAAGCC CTGGTCGAGTTGCAGGCCCTGGCGGGCAATCCCTATATCGATCACCTGCACACGTTTTTGAGCCGGTCGGTGGGCGACCC GGCGCGACGCGGTCCCACCCCCGCCGCCCGCAAGCGCCCCGGCGGCGACGACGCCTAA
Upstream 100 bases:
>100_bases TCGGAGGTCGATGGCAAACTGGTAGCCGAAGCCGAGATTATGTTTTCCCTGGTAGATTGAGTCCAGCCATCTCCCGCCCA TGCCACAATCGTCAAAAGTC
Downstream 100 bases:
>100_bases ATCGATGGCAGCCCGGCTTTTTGTCAGTACCGGCGAGGTCTCAGGCGACCTGCACGGCAGCTATCTTATCCAGGCGCTGC GCGAGCGCCGTCCGGATCTG
Product: UDP-N-acetylglucosamine acyltransferase
Products: NA
Alternate protein names: UDP-N-acetylglucosamine acyltransferase [H]
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MNPPALTTPLIHPSAVIHPRAVLHESVQVGPFAVVGEHVRIGAGTVVGPHAVIDGWTEIGCDNVIYNGASIGTPPQDLKY RNEPSRVRIGDNNDIREFVTVNRGTDKGSETVVGDKNLLMAYVHVGHNCAIGDNVVITNAVMLAGHVHIESQARIGGLVG VHQFVHIGRLAYIGGMARVDRDVPPFTLVEGHPGRTRGLNWVGLERAGISDAAGADRESYRLLRQAYKLLYRSATPLEKA LVELQALAGNPYIDHLHTFLSRSVGDPARRGPTPAARKRPGGDDA
Sequences:
>Translated_285_residues MNPPALTTPLIHPSAVIHPRAVLHESVQVGPFAVVGEHVRIGAGTVVGPHAVIDGWTEIGCDNVIYNGASIGTPPQDLKY RNEPSRVRIGDNNDIREFVTVNRGTDKGSETVVGDKNLLMAYVHVGHNCAIGDNVVITNAVMLAGHVHIESQARIGGLVG VHQFVHIGRLAYIGGMARVDRDVPPFTLVEGHPGRTRGLNWVGLERAGISDAAGADRESYRLLRQAYKLLYRSATPLEKA LVELQALAGNPYIDHLHTFLSRSVGDPARRGPTPAARKRPGGDDA >Mature_285_residues MNPPALTTPLIHPSAVIHPRAVLHESVQVGPFAVVGEHVRIGAGTVVGPHAVIDGWTEIGCDNVIYNGASIGTPPQDLKY RNEPSRVRIGDNNDIREFVTVNRGTDKGSETVVGDKNLLMAYVHVGHNCAIGDNVVITNAVMLAGHVHIESQARIGGLVG VHQFVHIGRLAYIGGMARVDRDVPPFTLVEGHPGRTRGLNWVGLERAGISDAAGADRESYRLLRQAYKLLYRSATPLEKA LVELQALAGNPYIDHLHTFLSRSVGDPARRGPTPAARKRPGGDDA
Specific function: Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell [H]
COG id: COG1043
COG function: function code M; Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family. LpxA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786378, Length=258, Percent_Identity=43.4108527131783, Blast_Score=208, Evalue=4e-55, Organism=Escherichia coli, GI1786376, Length=198, Percent_Identity=29.2929292929293, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001451 - InterPro: IPR010137 - InterPro: IPR011004 [H]
Pfam domain/function: PF00132 Hexapep [H]
EC number: =2.3.1.129 [H]
Molecular weight: Translated: 30594; Mature: 30594
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPPALTTPLIHPSAVIHPRAVLHESVQVGPFAVVGEHVRIGAGTVVGPHAVIDGWTEIG CCCCCCCCCCCCCCHHCCHHHHHHHCCCCCCEEEECCEEEECCCCEECCHHHHCCHHHHC CDNVIYNGASIGTPPQDLKYRNEPSRVRIGDNNDIREFVTVNRGTDKGSETVVGDKNLLM CCCEEECCCCCCCCHHHCCCCCCCCEEEECCCCCCCHHEEEECCCCCCCCEEECCCCEEE AYVHVGHNCAIGDNVVITNAVMLAGHVHIESQARIGGLVGVHQFVHIGRLAYIGGMARVD EEEEECCCCCCCCCEEEEEHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHC RDVPPFTLVEGHPGRTRGLNWVGLERAGISDAAGADRESYRLLRQAYKLLYRSATPLEKA CCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHH LVELQALAGNPYIDHLHTFLSRSVGDPARRGPTPAARKRPGGDDA HHHHHHHCCCCHHHHHHHHHHHHCCCHHHCCCCCHHHCCCCCCCC >Mature Secondary Structure MNPPALTTPLIHPSAVIHPRAVLHESVQVGPFAVVGEHVRIGAGTVVGPHAVIDGWTEIG CCCCCCCCCCCCCCHHCCHHHHHHHCCCCCCEEEECCEEEECCCCEECCHHHHCCHHHHC CDNVIYNGASIGTPPQDLKYRNEPSRVRIGDNNDIREFVTVNRGTDKGSETVVGDKNLLM CCCEEECCCCCCCCHHHCCCCCCCCEEEECCCCCCCHHEEEECCCCCCCCEEECCCCEEE AYVHVGHNCAIGDNVVITNAVMLAGHVHIESQARIGGLVGVHQFVHIGRLAYIGGMARVD EEEEECCCCCCCCCEEEEEHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHC RDVPPFTLVEGHPGRTRGLNWVGLERAGISDAAGADRESYRLLRQAYKLLYRSATPLEKA CCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHH LVELQALAGNPYIDHLHTFLSRSVGDPARRGPTPAARKRPGGDDA HHHHHHHCCCCHHHHHHHHHHHHCCCHHHCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]