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The map label for this gene is nusB

Identifier: 37520905

GI number: 37520905

Start: 1429346

End: 1429981

Strand: Reverse

Name: nusB

Synonym: gll1336

Alternate gene names: 37520905

Gene position: 1429981-1429346 (Counterclockwise)

Preceding gene: 37520906

Following gene: 37520904

Centisome position: 30.69

GC content: 65.09

Gene sequence:

>636_bases
ATGCAAGCCCGCCGCATCGCCCGCGAACTCGCCTTGATGAGCATCGGTCAGATGCCCGCCGACCGTTCGCGCCTGCAGGC
AAAGAACCTCGAAGAACTGGTGCTCGCCTCGGTGCGCACGCTGCGCGAGGAGGCCAACGAGAGCCTCCAGAGAGCCTGTA
CCGAGCTGCGACAGGGCCACAACCGCCTGGAGGCGAGCGAACTGACGGCACCCACCGTCGAGGCGGCCCGCCGCGAGGTG
GCGGCGGCGATCGCCCTGGCCGAGCAGGCAATCAACCGGGTGGGCGCCTCGCTGGAGTTGCCGGAGTTCGTGCGCCTGGC
GGACGAGTTGCAGGTGCGCGCCTATGCCTTCGAGCTGCTCGGTGCCTTTGTGCGCGAGGGGGACAATCTCGACAAGCTAT
TGGACACCTGTATGGAAGGTTGGCAAGTCGAACGGCTTACACGCATCGACCGCGACATTCTGCGTCTGGCGCTGGTGGAA
ATGGTGGAACTGAAGAGTGTCCCCTTTCGCGTCGCCATCGACGAGGCTGTCGAACTGGCCAAAAAATATAGCACAGACAC
CGCCGTCCGCTTCATCAACGGCGTCCTGCGGCGGGTGGTGCAGCATCTGCAGCTGGAACAGCGCCCGCGCCGTTGA

Upstream 100 bases:

>100_bases
GCGGGTGATTGTGCTGGAGCAGCTCTACCGCGCCGTCACCATCCTGGCCGGGCACCCTTACCACCATGGCTAAGATAGAT
AGGCCGTTACCCCTGTCGCC

Downstream 100 bases:

>100_bases
CGTCTAGAATTGCGAGTGCGAGCGGCCCCCGGGCGCGGTGCTAGGATAGCCGTTGAGCGATTTGTCCGCGAACTTACGAG
GATTGCTGGAAGTATGCTGA

Product: transcription antitermination protein NusB

Products: NA

Alternate protein names: Protein nusB

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MQARRIARELALMSIGQMPADRSRLQAKNLEELVLASVRTLREEANESLQRACTELRQGHNRLEASELTAPTVEAARREV
AAAIALAEQAINRVGASLELPEFVRLADELQVRAYAFELLGAFVREGDNLDKLLDTCMEGWQVERLTRIDRDILRLALVE
MVELKSVPFRVAIDEAVELAKKYSTDTAVRFINGVLRRVVQHLQLEQRPRR

Sequences:

>Translated_211_residues
MQARRIARELALMSIGQMPADRSRLQAKNLEELVLASVRTLREEANESLQRACTELRQGHNRLEASELTAPTVEAARREV
AAAIALAEQAINRVGASLELPEFVRLADELQVRAYAFELLGAFVREGDNLDKLLDTCMEGWQVERLTRIDRDILRLALVE
MVELKSVPFRVAIDEAVELAKKYSTDTAVRFINGVLRRVVQHLQLEQRPRR
>Mature_211_residues
MQARRIARELALMSIGQMPADRSRLQAKNLEELVLASVRTLREEANESLQRACTELRQGHNRLEASELTAPTVEAARREV
AAAIALAEQAINRVGASLELPEFVRLADELQVRAYAFELLGAFVREGDNLDKLLDTCMEGWQVERLTRIDRDILRLALVE
MVELKSVPFRVAIDEAVELAKKYSTDTAVRFINGVLRRVVQHLQLEQRPRR

Specific function: Involved in the transcription termination process

COG id: COG0781

COG function: function code K; Transcription termination factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nusB family

Homologues:

None

Paralogues:

None

Copy number: 900 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NUSB_GLOVI (Q7NKZ0)

Other databases:

- EMBL:   BA000045
- RefSeq:   NP_924282.1
- ProteinModelPortal:   Q7NKZ0
- SMR:   Q7NKZ0
- PRIDE:   Q7NKZ0
- GeneID:   2598798
- GenomeReviews:   BA000045_GR
- KEGG:   gvi:gll1336
- NMPDR:   fig|251221.1.peg.1336
- HOGENOM:   HBG635304
- OMA:   GHRFING
- ProtClustDB:   PRK09634
- BioCyc:   GVIO251221:GLL1336-MONOMER
- HAMAP:   MF_00073
- InterPro:   IPR011605
- InterPro:   IPR006027
- Gene3D:   G3DSA:1.10.940.10
- TIGRFAMs:   TIGR01951

Pfam domain/function: PF01029 NusB; SSF48013 NusB_RsmB_TIM44

EC number: NA

Molecular weight: Translated: 23955; Mature: 23955

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQARRIARELALMSIGQMPADRSRLQAKNLEELVLASVRTLREEANESLQRACTELRQGH
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRLEASELTAPTVEAARREVAAAIALAEQAINRVGASLELPEFVRLADELQVRAYAFELL
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
GAFVREGDNLDKLLDTCMEGWQVERLTRIDRDILRLALVEMVELKSVPFRVAIDEAVELA
HHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
KKYSTDTAVRFINGVLRRVVQHLQLEQRPRR
HHHCHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQARRIARELALMSIGQMPADRSRLQAKNLEELVLASVRTLREEANESLQRACTELRQGH
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRLEASELTAPTVEAARREVAAAIALAEQAINRVGASLELPEFVRLADELQVRAYAFELL
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
GAFVREGDNLDKLLDTCMEGWQVERLTRIDRDILRLALVEMVELKSVPFRVAIDEAVELA
HHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
KKYSTDTAVRFINGVLRRVVQHLQLEQRPRR
HHHCHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14621292