| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is phoP [H]
Identifier: 37520429
GI number: 37520429
Start: 906514
End: 907230
Strand: Direct
Name: phoP [H]
Synonym: glr0860
Alternate gene names: 37520429
Gene position: 906514-907230 (Clockwise)
Preceding gene: 37520428
Following gene: 37520430
Centisome position: 19.46
GC content: 68.06
Gene sequence:
>717_bases GTGCCGCCGTCTCCGGGTGTAACCATGCCGAACGCCGCTATCCTCGTCGTCGAAGACGACCCGCTCATTCTTGAGACCAT TCGCCGCTACCTCGAACACGCAGGGCACCGTTGCCATTGCGCCGCCGACGGTTGGGAGGCCGACCGGCTCGCCCTGCGCC ACCGCCCGGATCTGGTGGTGCTCGACTGGATGCTGCCGGGCGTGGACGGTCTGGCGCTGTGCGAGCGCTGGCGCAAAGGG GAGTACTTCGCGCCTGTGTTGATGCTCACGGCGCGCACCGAGGAGGACCACCGCGTGCGCGCTCTGGCGGGCGGGGCAGA CGACTACCTGGACAAACCTTTCTCTGCAAAGGAACTGGTGGCCCGGGTGCAGGCCCTGCTGCGCCGCGCCTACGCCAGCG GTTACCGCGACTGCAGCCCCAAAAACGGCCTGCTGGTCGATCGCAACACCCGTCAGGTGCAGCTGCACGGTCGCCCGATC GACCTGCGGGCCCGGGAATTCGACCTGCTCGCCCAGTTGGCCGATCACCCCGGCCGGGTGTACTCGCGCGACGAACTGCT CGAGCGGGTCTGGGGCTACGACTTCGAAGGCGGTCACCGGACGATCGACGTGCACGTGCGCAAGCTCCGCGAGAAGCTCG AGCCGGATCCCACCCGCCCGGTCTATGTGCTCACCGTCTGGGGTGTGGGTTACAAATTCGCGGGACCGCCGCGGTGA
Upstream 100 bases:
>100_bases CAGTCTGTCGGCACCTGCCGCGGCTGGGCGTTTTCCCGTGTTTAACAGATTTCTAACATTCTTTCGGTAGCCTGGGTCTC AAGGCAGAGCCTCCCCGCCT
Downstream 100 bases:
>100_bases GCTTCCACCCAAGGGCCCTGGTGCCCCGCACGCTCTGGGGCCGCCTGACCCTCGCCTTCGTGGGCCTGACGGCCGCCTGC CTGTGGGGAATCGGCCTGGT
Product: two-component response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MPPSPGVTMPNAAILVVEDDPLILETIRRYLEHAGHRCHCAADGWEADRLALRHRPDLVVLDWMLPGVDGLALCERWRKG EYFAPVLMLTARTEEDHRVRALAGGADDYLDKPFSAKELVARVQALLRRAYASGYRDCSPKNGLLVDRNTRQVQLHGRPI DLRAREFDLLAQLADHPGRVYSRDELLERVWGYDFEGGHRTIDVHVRKLREKLEPDPTRPVYVLTVWGVGYKFAGPPR
Sequences:
>Translated_238_residues MPPSPGVTMPNAAILVVEDDPLILETIRRYLEHAGHRCHCAADGWEADRLALRHRPDLVVLDWMLPGVDGLALCERWRKG EYFAPVLMLTARTEEDHRVRALAGGADDYLDKPFSAKELVARVQALLRRAYASGYRDCSPKNGLLVDRNTRQVQLHGRPI DLRAREFDLLAQLADHPGRVYSRDELLERVWGYDFEGGHRTIDVHVRKLREKLEPDPTRPVYVLTVWGVGYKFAGPPR >Mature_237_residues PPSPGVTMPNAAILVVEDDPLILETIRRYLEHAGHRCHCAADGWEADRLALRHRPDLVVLDWMLPGVDGLALCERWRKGE YFAPVLMLTARTEEDHRVRALAGGADDYLDKPFSAKELVARVQALLRRAYASGYRDCSPKNGLLVDRNTRQVQLHGRPID LRAREFDLLAQLADHPGRVYSRDELLERVWGYDFEGGHRTIDVHVRKLREKLEPDPTRPVYVLTVWGVGYKFAGPPR
Specific function: Member of the two-component regulatory system phoP/phoR involved in the regulation of alkaline phosphatase genes phoA and phoB and of phosphodiesterase [H]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1789809, Length=230, Percent_Identity=38.2608695652174, Blast_Score=159, Evalue=1e-40, Organism=Escherichia coli, GI1786599, Length=223, Percent_Identity=42.6008968609865, Blast_Score=159, Evalue=2e-40, Organism=Escherichia coli, GI1788394, Length=223, Percent_Identity=36.7713004484305, Blast_Score=139, Evalue=2e-34, Organism=Escherichia coli, GI1786784, Length=223, Percent_Identity=38.1165919282511, Blast_Score=137, Evalue=4e-34, Organism=Escherichia coli, GI87082012, Length=225, Percent_Identity=36.8888888888889, Blast_Score=136, Evalue=1e-33, Organism=Escherichia coli, GI1787375, Length=223, Percent_Identity=36.7713004484305, Blast_Score=132, Evalue=2e-32, Organism=Escherichia coli, GI1789402, Length=222, Percent_Identity=37.8378378378378, Blast_Score=126, Evalue=1e-30, Organism=Escherichia coli, GI1786911, Length=221, Percent_Identity=36.6515837104072, Blast_Score=125, Evalue=3e-30, Organism=Escherichia coli, GI1790863, Length=235, Percent_Identity=32.3404255319149, Blast_Score=124, Evalue=6e-30, Organism=Escherichia coli, GI1790552, Length=222, Percent_Identity=35.5855855855856, Blast_Score=116, Evalue=1e-27, Organism=Escherichia coli, GI1790860, Length=228, Percent_Identity=34.2105263157895, Blast_Score=116, Evalue=1e-27, Organism=Escherichia coli, GI145693140, Length=237, Percent_Identity=32.0675105485232, Blast_Score=106, Evalue=1e-24, Organism=Escherichia coli, GI2367329, Length=225, Percent_Identity=35.1111111111111, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1787229, Length=229, Percent_Identity=30.1310043668122, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1790299, Length=154, Percent_Identity=33.1168831168831, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1788550, Length=119, Percent_Identity=36.9747899159664, Blast_Score=68, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR016032 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 27118; Mature: 26987
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPSPGVTMPNAAILVVEDDPLILETIRRYLEHAGHRCHCAADGWEADRLALRHRPDLVV CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHCCCCEEE LDWMLPGVDGLALCERWRKGEYFAPVLMLTARTEEDHRVRALAGGADDYLDKPFSAKELV EEEECCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEECCCHHHHCCCCCHHHHH ARVQALLRRAYASGYRDCSPKNGLLVDRNTRQVQLHGRPIDLRAREFDLLAQLADHPGRV HHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCC YSRDELLERVWGYDFEGGHRTIDVHVRKLREKLEPDPTRPVYVLTVWGVGYKFAGPPR CCHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHCCCCCCCCEEEEEEECCCEECCCCCC >Mature Secondary Structure PPSPGVTMPNAAILVVEDDPLILETIRRYLEHAGHRCHCAADGWEADRLALRHRPDLVV CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHCCCCEEE LDWMLPGVDGLALCERWRKGEYFAPVLMLTARTEEDHRVRALAGGADDYLDKPFSAKELV EEEECCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEECCCHHHHCCCCCHHHHH ARVQALLRRAYASGYRDCSPKNGLLVDRNTRQVQLHGRPIDLRAREFDLLAQLADHPGRV HHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCC YSRDELLERVWGYDFEGGHRTIDVHVRKLREKLEPDPTRPVYVLTVWGVGYKFAGPPR CCHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHCCCCCCCCEEEEEEECCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1454550; 3036763; 9387221; 9384377; 8045898; 3142862 [H]