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The map label for this gene is psbJ

Identifier: 37520428

GI number: 37520428

Start: 906270

End: 906380

Strand: Direct

Name: psbJ

Synonym: gvip112

Alternate gene names: 37520428

Gene position: 906270-906380 (Clockwise)

Preceding gene: 37520427

Following gene: 37520429

Centisome position: 19.45

GC content: 61.26

Gene sequence:

>111_bases
ATGCCGCAAAGAATTCCCCTGTGGATGGTGGGTGTGATGGCCGGTCTGGGCGTGATTGCGATCCTGGGGCTGTTCTTCTA
CGGTTCCTACGCCGGTCTCGGCGCCGGTTAG

Upstream 100 bases:

>100_bases
GTCGAGCTGAACCGCACTTCCCTGTACATGGGCCTGGTGCTGGTGCTCGTGATCATCTTGCTGTTCTCCAACTACTTCAT
CAACTAATCGGAGCGCGACG

Downstream 100 bases:

>100_bases
ATCCCGCGTTTCCCATCGATTCGCGCAAGCGCGCAGTCTGTCGGCACCTGCCGCGGCTGGGCGTTTTCCCGTGTTTAACA
GATTTCTAACATTCTTTCGG

Product: photosystem II reaction center protein J

Products: NA

Alternate protein names: PSII-J

Number of amino acids: Translated: 36; Mature: 35

Protein sequence:

>36_residues
MPQRIPLWMVGVMAGLGVIAILGLFFYGSYAGLGAG

Sequences:

>Translated_36_residues
MPQRIPLWMVGVMAGLGVIAILGLFFYGSYAGLGAG
>Mature_35_residues
PQRIPLWMVGVMAGLGVIAILGLFFYGSYAGLGAG

Specific function: This protein is a component of the reaction center of photosystem II

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbJ family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSBJ_GLOVI (Q7NMA7)

Other databases:

- EMBL:   BA000045
- RefSeq:   NP_923805.1
- ProteinModelPortal:   Q7NMA7
- SMR:   Q7NMA7
- GeneID:   2599285
- GenomeReviews:   BA000045_GR
- NMPDR:   fig|251221.1.peg.859
- HOGENOM:   HBG747967
- ProtClustDB:   PRK02565
- BioCyc:   GVIO251221:GSR0859-MONOMER
- GO:   GO:0015979
- HAMAP:   MF_01305
- InterPro:   IPR002682

Pfam domain/function: PF01788 PsbJ

EC number: NA

Molecular weight: Translated: 3728; Mature: 3596

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x11e08b70)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.3 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQRIPLWMVGVMAGLGVIAILGLFFYGSYAGLGAG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
>Mature Secondary Structure 
PQRIPLWMVGVMAGLGVIAILGLFFYGSYAGLGAG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14621292