| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is yitJ [H]
Identifier: 37520358
GI number: 37520358
Start: 840819
End: 841712
Strand: Direct
Name: yitJ [H]
Synonym: glr0789
Alternate gene names: 37520358
Gene position: 840819-841712 (Clockwise)
Preceding gene: 37520355
Following gene: 37520359
Centisome position: 18.05
GC content: 64.88
Gene sequence:
>894_bases ATGGTGAAGTCAGCCCGCCTCGAGACGGCCGCCGAGCGCAAGGAATTTTTGATCACCGCCGAGGTGATGCCTCCCAAAGG GCCGGACATAGAAGCCTTTCTAGAAAAAGCCACTCTGCTCAAAAACCGGGTGCATGCCGTCAATGTCACCGATTCCAACC GGGCGGTGATGCGCATGAGCCCGCTTGCCGCCTCGGCATTGCTGGTGCAGCGGGGGATCGAGCCTATCTGCCAGCTGGCC TGCCGCGACCGCAACCGCATCGCTCTGCAGGGCGATCTGCTCGGGGCGGAGGCGCTGGGTATCCACAATATCCTGGCGCT CACCGGCGATCCGGTCGGTTGCGGCGATCACCCCCAGGCACGGGCGGTCTGCGACCTCGAATCGGTGCGGCTGCTCAGGG TGATCGGCGGGCTCAACCGGGGCTTCGACAGCGCCGGCAACGCCCTGAGCAGCCCCACGCGCCTGTTTGCCGGGGCGGCC ATCGATCCGCAGTGCACCAGCGAAGCGGGGCTGCGCTCCCGCTTTCGGCGCAAGGTGGAGTCGGGGGCGCGCTTTTTTCA AAGCCAGCTGGTCACCGATTTTGAGCGTCTGGCCTGGTTCATGGACGCAATTGCCCACGAGAGCGCCCGGCCGGTGCTCG CCGGGATATTCTTGCTCAAATCCGCCAAGAATGCCGAATTCATCAACCGCAATCTGCCCGGGGTCACCATTCCGGAGGGG ATCATCCGGCGGCTCGCCGGGGCGTGCGATCCCCTCAAAGAAGGCACGGCGATCGCCGCCGAGCAGGTGGCCAAGGCCCG GCAGATCTGCGACGGCGTCCATCTGATGGCCATCCGCAAGGAGGAGTTGATTCCCGAAATTCTCGACCTGGCCGGTATCG CGCCTGTGCAATAG
Upstream 100 bases:
>100_bases AAAATCGCCGGCTCCTGCGGTGGCCGGTCGGTCTGGGACGGCTCGGCGGGTCGCCCGAATATAGGTACCATGCATAGATA CCCAGGACAACCCTCGACCC
Downstream 100 bases:
>100_bases ACAATTTGCCGCCGGGTGGGGCATCCGGGCGTGGTAGGATGACCCCAACTTTTGACGGGGTGTTCATGGCAGGTCTCCTG CGGCGGCTGGGTGCGGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Homocysteine S-methyltransferase; S-methylmethionine:homocysteine methyltransferase; 5,10-methylenetetrahydrofolate reductase [H]
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MVKSARLETAAERKEFLITAEVMPPKGPDIEAFLEKATLLKNRVHAVNVTDSNRAVMRMSPLAASALLVQRGIEPICQLA CRDRNRIALQGDLLGAEALGIHNILALTGDPVGCGDHPQARAVCDLESVRLLRVIGGLNRGFDSAGNALSSPTRLFAGAA IDPQCTSEAGLRSRFRRKVESGARFFQSQLVTDFERLAWFMDAIAHESARPVLAGIFLLKSAKNAEFINRNLPGVTIPEG IIRRLAGACDPLKEGTAIAAEQVAKARQICDGVHLMAIRKEELIPEILDLAGIAPVQ
Sequences:
>Translated_297_residues MVKSARLETAAERKEFLITAEVMPPKGPDIEAFLEKATLLKNRVHAVNVTDSNRAVMRMSPLAASALLVQRGIEPICQLA CRDRNRIALQGDLLGAEALGIHNILALTGDPVGCGDHPQARAVCDLESVRLLRVIGGLNRGFDSAGNALSSPTRLFAGAA IDPQCTSEAGLRSRFRRKVESGARFFQSQLVTDFERLAWFMDAIAHESARPVLAGIFLLKSAKNAEFINRNLPGVTIPEG IIRRLAGACDPLKEGTAIAAEQVAKARQICDGVHLMAIRKEELIPEILDLAGIAPVQ >Mature_297_residues MVKSARLETAAERKEFLITAEVMPPKGPDIEAFLEKATLLKNRVHAVNVTDSNRAVMRMSPLAASALLVQRGIEPICQLA CRDRNRIALQGDLLGAEALGIHNILALTGDPVGCGDHPQARAVCDLESVRLLRVIGGLNRGFDSAGNALSSPTRLFAGAA IDPQCTSEAGLRSRFRRKVESGARFFQSQLVTDFERLAWFMDAIAHESARPVLAGIFLLKSAKNAEFINRNLPGVTIPEG IIRRLAGACDPLKEGTAIAAEQVAKARQICDGVHLMAIRKEELIPEILDLAGIAPVQ
Specific function: Unknown
COG id: COG0685
COG function: function code E; 5,10-methylenetetrahydrofolate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Hcy-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003171 - InterPro: IPR003726 [H]
Pfam domain/function: PF02219 MTHFR; PF02574 S-methyl_trans [H]
EC number: =2.1.1.10; =1.5.1.20 [H]
Molecular weight: Translated: 32041; Mature: 32041
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKSARLETAAERKEFLITAEVMPPKGPDIEAFLEKATLLKNRVHAVNVTDSNRAVMRMS CCCCHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCEEEEEC PLAASALLVQRGIEPICQLACRDRNRIALQGDLLGAEALGIHNILALTGDPVGCGDHPQA HHHHHHHHHHHCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHEEECCCCCCCCCCCCH RAVCDLESVRLLRVIGGLNRGFDSAGNALSSPTRLFAGAAIDPQCTSEAGLRSRFRRKVE HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHH SGARFFQSQLVTDFERLAWFMDAIAHESARPVLAGIFLLKSAKNAEFINRNLPGVTIPEG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCHH IIRRLAGACDPLKEGTAIAAEQVAKARQICDGVHLMAIRKEELIPEILDLAGIAPVQ HHHHHHHCCCCHHCCHHHHHHHHHHHHHHHCCHHHEEHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MVKSARLETAAERKEFLITAEVMPPKGPDIEAFLEKATLLKNRVHAVNVTDSNRAVMRMS CCCCHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCEEEEEC PLAASALLVQRGIEPICQLACRDRNRIALQGDLLGAEALGIHNILALTGDPVGCGDHPQA HHHHHHHHHHHCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHEEECCCCCCCCCCCCH RAVCDLESVRLLRVIGGLNRGFDSAGNALSSPTRLFAGAAIDPQCTSEAGLRSRFRRKVE HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHH SGARFFQSQLVTDFERLAWFMDAIAHESARPVLAGIFLLKSAKNAEFINRNLPGVTIPEG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCHH IIRRLAGACDPLKEGTAIAAEQVAKARQICDGVHLMAIRKEELIPEILDLAGIAPVQ HHHHHHHCCCCHHCCHHHHHHHHHHHHHHHCCHHHEEHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353932; 9384377 [H]