Click here to switch to the map view.

The map label for this gene is yebA [C]

Identifier: 37520359

GI number: 37520359

Start: 841751

End: 842920

Strand: Direct

Name: yebA [C]

Synonym: glr0790

Alternate gene names: 37520359

Gene position: 841751-842920 (Clockwise)

Preceding gene: 37520358

Following gene: 37520360

Centisome position: 18.07

GC content: 64.62

Gene sequence:

>1170_bases
ATGACCCCAACTTTTGACGGGGTGTTCATGGCAGGTCTCCTGCGGCGGCTGGGTGCGGCGGCGATCTTGACGATCGGGCT
GACGGCATCGCAAAGTGTCGCTGCTTCTCCGACCATCCAGAATCTCCAGGTACGCCAGCAGCAGTTGCAGGAGAAGTTGC
AGTCGACCCGCAGGCAGGCTGTGCAGTTGCGCCTCAAAGAAAAAGTGGCCCGCAGCCGGCTTGGCGCCATCCGCCAGAAC
CTGACGGTCACCACCAACAAGCTGCAGGACTCGCGCTATCGGCTGTCGGTGGCCCAGCAGCGGCTGGTGGCCCTCAAGCG
CGATCTCGGTCGCCTGCAGACCGAATTTTCGTCGCTGCAGCGCGCCGCCGCCGAGCGGCTGCGCTTTTTGCAGAAGCAGC
GCCCCGAGCAGTGGTGGGCGTTGCTTCTGGCAAGCCGCGATCTCAACACCTTGATGGATCGGCGCCAACAGCTGGGCAAA
GTCTTCGAGCGCGATCAGCAATTGCTTGAGGCCCTCGATACCCGGCGCGAGCAGGTCACCCGCAAGCGCAGCGCCGTCGA
GAACCAGAAAAACGACATCGCTCTGATTGCCCAGCAATTGGCCGGCCGCCGCTCGCAGTTTGCCCGGCAAGCCTCGATCC
AATCGGAACTGGTCCAGCGCCTGAGCACCCAGCGTGCCGCCTACGAAGCGGCCCAACGGCGGCTGGCTGCCGATTCGAAG
CGCGTCTCGGCGATGATCCGCACGATTATCGCGAGCGAGCGCCGCTACAACAGTGTCCAGGGCAGCGGCCGGATGATCCT
GCCCACCGAGGGCCGCCTGAGCAGCCAGTTCGGTATGCGCCACCATCCCATCTTCAAAGTGCGCAAGATGCACACGGGCA
TCGATGTCGCGGCCCGCTCGGGTACTCCCATCCGGGCTGCCGACGACGGCACGGTGCTCTACGCCGGCTGGTACGGCGGC
TACGGCCGCTGTGTGATCGTCAGCCACGGCGGCACGCTCTCGACGCTCTATGCCCATGCGAGCCGTCTGTTTGTCACCGT
CGGCCAGACAGTCAAAAAAGGCGACCCGCTCGCCGCGGTCGGCTCCACCGGCTTTTCGACCGGACCGCATCTGCACTTTG
AAGTGCGCGTCAACGGTTCACCCGTCAATCCCCTCGATTACCTGCGCTGA

Upstream 100 bases:

>100_bases
TCCGCAAGGAGGAGTTGATTCCCGAAATTCTCGACCTGGCCGGTATCGCGCCTGTGCAATAGACAATTTGCCGCCGGGTG
GGGCATCCGGGCGTGGTAGG

Downstream 100 bases:

>100_bases
TGAGCACCTTCGACGTTTTTGCCCTGTGCAATCCGCTTTACGACCTGCAGGTGCAGGTCTCCGACGCCCTGCTGGTGAGC
TTCGGCTTTCCCAAAGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MTPTFDGVFMAGLLRRLGAAAILTIGLTASQSVAASPTIQNLQVRQQQLQEKLQSTRRQAVQLRLKEKVARSRLGAIRQN
LTVTTNKLQDSRYRLSVAQQRLVALKRDLGRLQTEFSSLQRAAAERLRFLQKQRPEQWWALLLASRDLNTLMDRRQQLGK
VFERDQQLLEALDTRREQVTRKRSAVENQKNDIALIAQQLAGRRSQFARQASIQSELVQRLSTQRAAYEAAQRRLAADSK
RVSAMIRTIIASERRYNSVQGSGRMILPTEGRLSSQFGMRHHPIFKVRKMHTGIDVAARSGTPIRAADDGTVLYAGWYGG
YGRCVIVSHGGTLSTLYAHASRLFVTVGQTVKKGDPLAAVGSTGFSTGPHLHFEVRVNGSPVNPLDYLR

Sequences:

>Translated_389_residues
MTPTFDGVFMAGLLRRLGAAAILTIGLTASQSVAASPTIQNLQVRQQQLQEKLQSTRRQAVQLRLKEKVARSRLGAIRQN
LTVTTNKLQDSRYRLSVAQQRLVALKRDLGRLQTEFSSLQRAAAERLRFLQKQRPEQWWALLLASRDLNTLMDRRQQLGK
VFERDQQLLEALDTRREQVTRKRSAVENQKNDIALIAQQLAGRRSQFARQASIQSELVQRLSTQRAAYEAAQRRLAADSK
RVSAMIRTIIASERRYNSVQGSGRMILPTEGRLSSQFGMRHHPIFKVRKMHTGIDVAARSGTPIRAADDGTVLYAGWYGG
YGRCVIVSHGGTLSTLYAHASRLFVTVGQTVKKGDPLAAVGSTGFSTGPHLHFEVRVNGSPVNPLDYLR
>Mature_388_residues
TPTFDGVFMAGLLRRLGAAAILTIGLTASQSVAASPTIQNLQVRQQQLQEKLQSTRRQAVQLRLKEKVARSRLGAIRQNL
TVTTNKLQDSRYRLSVAQQRLVALKRDLGRLQTEFSSLQRAAAERLRFLQKQRPEQWWALLLASRDLNTLMDRRQQLGKV
FERDQQLLEALDTRREQVTRKRSAVENQKNDIALIAQQLAGRRSQFARQASIQSELVQRLSTQRAAYEAAQRRLAADSKR
VSAMIRTIIASERRYNSVQGSGRMILPTEGRLSSQFGMRHHPIFKVRKMHTGIDVAARSGTPIRAADDGTVLYAGWYGGY
GRCVIVSHGGTLSTLYAHASRLFVTVGQTVKKGDPLAAVGSTGFSTGPHLHFEVRVNGSPVNPLDYLR

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=126, Percent_Identity=42.0634920634921, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI87082297, Length=96, Percent_Identity=41.6666666666667, Blast_Score=89, Evalue=7e-19,
Organism=Escherichia coli, GI1789099, Length=122, Percent_Identity=40.9836065573771, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI87082174, Length=174, Percent_Identity=31.0344827586207, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 43523; Mature: 43391

Theoretical pI: Translated: 11.94; Mature: 11.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCEEEEEEEECCCCCCHHHHCC
>Mature Secondary Structure 
TPTFDGVFMAGLLRRLGAAAILTIGLTASQSVAASPTIQNLQVRQQQLQEKLQSTRRQA
CCCCHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VQLRLKEKVARSRLGAIRQNLTVTTNKLQDSRYRLSVAQQRLVALKRDLGRLQTEFSSLQ
HHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAAAERLRFLQKQRPEQWWALLLASRDLNTLMDRRQQLGKVFERDQQLLEALDTRREQVT
HHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKRSAVENQKNDIALIAQQLAGRRSQFARQASIQSELVQRLSTQRAAYEAAQRRLAADSK
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVSAMIRTIIASERRYNSVQGSGRMILPTEGRLSSQFGMRHHPIFKVRKMHTGIDVAARS
HHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHCCCCCCCHHHHHHHHCCCCEEECC
GTPIRAADDGTVLYAGWYGGYGRCVIVSHGGTLSTLYAHASRLFVTVGQTVKKGDPLAAV
CCCEEECCCCCEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHCCCCCEEE
GSTGFSTGPHLHFEVRVNGSPVNPLDYLR
CCCCCCCCCEEEEEEEECCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]