Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is yegH [H]

Identifier: 34499844

GI number: 34499844

Start: 4733395

End: 4734978

Strand: Direct

Name: yegH [H]

Synonym: CV_4389

Alternate gene names: 34499844

Gene position: 4733395-4734978 (Clockwise)

Preceding gene: 34499843

Following gene: 34499845

Centisome position: 99.63

GC content: 67.42

Gene sequence:

>1584_bases
ATGGACCTTTCATGGCTGTCCGACCCCGCCGCCTGGCTGGGCCTCTTGACGCTGATCATCCTCGAGATCGTACTCGGCAT
CGACAACCTGATCTTCGTGGCCATCCTGGCCGAAAAACTCCCGCCGGAACAACGCGACCGCGCCCGCATCGTCGGCCTGT
CGCTGGCGCTGGTGATGCGCCTGATCCTGCTGGCCAGCATCTCCTGGCTGGTCACCCTGACCACGCCGTTGTTCTCGGTC
TGGGGCCAGTCCTTCGCCGGCCGCGACCTGATCATGCTGTGCGGCGGCGTGTTCCTGCTGTTCAAGGCCACCACCGAGCT
GCATGAGCGGCTGGAGGGCGTCGAACACGTGAAGGGCGGCGCGCAGCGCGCCTACGCGGCCTTCGCCACCGTGGTCGCCC
AGATCCTGGTGCTGGACGCGGTGTTCTCGATCGACTCGGTGATCACCGCCATCGGCATGTCCGAACACCTGCCGGTGATG
ATGCTGGCCGTCGTCATCGCCATGGTCCTGATGATCGCCGCCAGCAAGCCGCTGACCACCTTCGTCAACGCCCACCCCAC
CGTGGTGATGCTGTGCCTGGGCTTCCTGCTGATGATAGGCTTCAGCCTGATCGCGGAAGGCTTCGGCTTCCACATCCCCA
AGGGCTACCTGTACGCCGCCATCGGCTTCTCGGTGTTGATCGAAGCCTTCAACCAGGTATCGCAGGCCAACCGCATCCGC
TACCTGAACCGCACCCAGAGCTTCCGCGAGCGCACCGCCAACACGGTGCTGAGCCTGATGGGCAGCCGCCTGACCGCCGC
CAGCGCCGACGAAGCCAAGCCGGAAGCCGGCCCGCAGCCGGTGGAGGACACCGCCTTCGGCCAGAACGAGCGCGCGATGA
TACACAGCGTGCTGACGCTGGCCGAGCGGCCGATCCGCGTGATCGCCACCCCGCGCGCCGACATCCACCGCCTGGACCTG
AGCCAGCCGGAGGCGTCCCAGCGCAAGGCGCTGCGCGACAGCCCCTACTCCCGCCTGGTGGTGATACGCGACGGCAGCAT
AGACGAGCCGCTGGGCATCGTCGCCCGCAAGGACCTGCTGGCCCAGCTGCTGGACGGCCGCCCGCTGGACATCGACGCCG
CGCTGCGCCAGCCGCTGGTGCTGCCGGAAACCGTCACCGTGCTGAAGGCGCTGGAGAGCTTCCGCCAGCACGCCGCCGAC
ATGGCCTTCGTGGTCAACGAGTTCGGCAGCCTGGAAGGCATCGTCACCCAGAAGGACCTGATGGAGGCGATCGCCGGCGA
ATTCCCGGAAGAGCACGAGCGCCACGAGCTGCCGGCCATCGTGGTCCAGCCGGACGGCAGCTACGACGTGGAAGGCAGCC
TGGAGCTCGTCACGCTGGAGCAGTACCTGACGCTGGGCGATTTCGAGGACGAGGACTTCCACACCGTGGCCGGCCTGCTG
ATGGACTGCCTGGAGCGCATCCCGCGCGAGGGCGACGAAGTCACCGTCGGCGAATGGAAGCTGCGCGTCACCGCGCAGAA
GGGCAACCGCACCGAGCGCGTGCTGATCAGCCCGCTGGCCGACGGCTTCGATGCCGCCATCTGA

Upstream 100 bases:

>100_bases
GCCGGGCTTTTTGCATTTTCCCTGCCCGGCGCGCCGTCATTTGGTATCCTTGTAGCGTTTTTATCGCTTTTTTATCGCAC
AAGGAACGCTTTACACCATC

Downstream 100 bases:

>100_bases
GCCTGAGCATGGACCGGGGCCGTCCAGGCCCTGGTTTCTCTACGTGCTGCGCTGCGCCGACGGCGCGCTGTACACCGGCG
TCAGCACCGACGTCGCGCGC

Product: transport membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 527; Mature: 527

Protein sequence:

>527_residues
MDLSWLSDPAAWLGLLTLIILEIVLGIDNLIFVAILAEKLPPEQRDRARIVGLSLALVMRLILLASISWLVTLTTPLFSV
WGQSFAGRDLIMLCGGVFLLFKATTELHERLEGVEHVKGGAQRAYAAFATVVAQILVLDAVFSIDSVITAIGMSEHLPVM
MLAVVIAMVLMIAASKPLTTFVNAHPTVVMLCLGFLLMIGFSLIAEGFGFHIPKGYLYAAIGFSVLIEAFNQVSQANRIR
YLNRTQSFRERTANTVLSLMGSRLTAASADEAKPEAGPQPVEDTAFGQNERAMIHSVLTLAERPIRVIATPRADIHRLDL
SQPEASQRKALRDSPYSRLVVIRDGSIDEPLGIVARKDLLAQLLDGRPLDIDAALRQPLVLPETVTVLKALESFRQHAAD
MAFVVNEFGSLEGIVTQKDLMEAIAGEFPEEHERHELPAIVVQPDGSYDVEGSLELVTLEQYLTLGDFEDEDFHTVAGLL
MDCLERIPREGDEVTVGEWKLRVTAQKGNRTERVLISPLADGFDAAI

Sequences:

>Translated_527_residues
MDLSWLSDPAAWLGLLTLIILEIVLGIDNLIFVAILAEKLPPEQRDRARIVGLSLALVMRLILLASISWLVTLTTPLFSV
WGQSFAGRDLIMLCGGVFLLFKATTELHERLEGVEHVKGGAQRAYAAFATVVAQILVLDAVFSIDSVITAIGMSEHLPVM
MLAVVIAMVLMIAASKPLTTFVNAHPTVVMLCLGFLLMIGFSLIAEGFGFHIPKGYLYAAIGFSVLIEAFNQVSQANRIR
YLNRTQSFRERTANTVLSLMGSRLTAASADEAKPEAGPQPVEDTAFGQNERAMIHSVLTLAERPIRVIATPRADIHRLDL
SQPEASQRKALRDSPYSRLVVIRDGSIDEPLGIVARKDLLAQLLDGRPLDIDAALRQPLVLPETVTVLKALESFRQHAAD
MAFVVNEFGSLEGIVTQKDLMEAIAGEFPEEHERHELPAIVVQPDGSYDVEGSLELVTLEQYLTLGDFEDEDFHTVAGLL
MDCLERIPREGDEVTVGEWKLRVTAQKGNRTERVLISPLADGFDAAI
>Mature_527_residues
MDLSWLSDPAAWLGLLTLIILEIVLGIDNLIFVAILAEKLPPEQRDRARIVGLSLALVMRLILLASISWLVTLTTPLFSV
WGQSFAGRDLIMLCGGVFLLFKATTELHERLEGVEHVKGGAQRAYAAFATVVAQILVLDAVFSIDSVITAIGMSEHLPVM
MLAVVIAMVLMIAASKPLTTFVNAHPTVVMLCLGFLLMIGFSLIAEGFGFHIPKGYLYAAIGFSVLIEAFNQVSQANRIR
YLNRTQSFRERTANTVLSLMGSRLTAASADEAKPEAGPQPVEDTAFGQNERAMIHSVLTLAERPIRVIATPRADIHRLDL
SQPEASQRKALRDSPYSRLVVIRDGSIDEPLGIVARKDLLAQLLDGRPLDIDAALRQPLVLPETVTVLKALESFRQHAAD
MAFVVNEFGSLEGIVTQKDLMEAIAGEFPEEHERHELPAIVVQPDGSYDVEGSLELVTLEQYLTLGDFEDEDFHTVAGLL
MDCLERIPREGDEVTVGEWKLRVTAQKGNRTERVLISPLADGFDAAI

Specific function: Unknown

COG id: COG0861

COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=197, Percent_Identity=24.3654822335025, Blast_Score=81, Evalue=3e-15,
Organism=Escherichia coli, GI87082033, Length=525, Percent_Identity=53.5238095238095, Blast_Score=507, Evalue=1e-145,
Organism=Escherichia coli, GI1788119, Length=515, Percent_Identity=52.4271844660194, Blast_Score=486, Evalue=1e-138,
Organism=Escherichia coli, GI1789197, Length=233, Percent_Identity=50.6437768240343, Blast_Score=222, Evalue=4e-59,
Organism=Escherichia coli, GI1790664, Length=233, Percent_Identity=27.0386266094421, Blast_Score=108, Evalue=1e-24,
Organism=Escherichia coli, GI145693175, Length=239, Percent_Identity=25.5230125523013, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1786879, Length=233, Percent_Identity=28.3261802575107, Blast_Score=80, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR005496
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF03741 TerC [H]

EC number: NA

Molecular weight: Translated: 57791; Mature: 57791

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLSWLSDPAAWLGLLTLIILEIVLGIDNLIFVAILAEKLPPEQRDRARIVGLSLALVMR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LILLASISWLVTLTTPLFSVWGQSFAGRDLIMLCGGVFLLFKATTELHERLEGVEHVKGG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
AQRAYAAFATVVAQILVLDAVFSIDSVITAIGMSEHLPVMMLAVVIAMVLMIAASKPLTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHH
FVNAHPTVVMLCLGFLLMIGFSLIAEGFGFHIPKGYLYAAIGFSVLIEAFNQVSQANRIR
HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
YLNRTQSFRERTANTVLSLMGSRLTAASADEAKPEAGPQPVEDTAFGQNERAMIHSVLTL
HHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
AERPIRVIATPRADIHRLDLSQPEASQRKALRDSPYSRLVVIRDGSIDEPLGIVARKDLL
HHCCEEEEECCCCHHHCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHH
AQLLDGRPLDIDAALRQPLVLPETVTVLKALESFRQHAADMAFVVNEFGSLEGIVTQKDL
HHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
MEAIAGEFPEEHERHELPAIVVQPDGSYDVEGSLELVTLEQYLTLGDFEDEDFHTVAGLL
HHHHHCCCCCHHHHCCCCEEEECCCCCCCCCCCEEEEEHHHHHHCCCCCCCHHHHHHHHH
MDCLERIPREGDEVTVGEWKLRVTAQKGNRTERVLISPLADGFDAAI
HHHHHHCCCCCCCEEECCEEEEEEECCCCCCCEEEEEHHCCCCCCCC
>Mature Secondary Structure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HHHHHHCCCCCCCEEECCEEEEEEECCCCCCCEEEEEHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]