| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is yhbQ [C]
Identifier: 34499845
GI number: 34499845
Start: 4735022
End: 4735270
Strand: Direct
Name: yhbQ [C]
Synonym: CV_4390
Alternate gene names: 34499845
Gene position: 4735022-4735270 (Clockwise)
Preceding gene: 34499844
Following gene: 34499846
Centisome position: 99.66
GC content: 74.3
Gene sequence:
>249_bases GTGCTGCGCTGCGCCGACGGCGCGCTGTACACCGGCGTCAGCACCGACGTCGCGCGCCGCTACCGCCAGCACCAGGCCGG CAAGGGCGCGCGCTACACCCGCCTCAACCCGCCGCTCGCCGTCGAGCTGGTGATCGAATACCCGGACCGCTCCGCCGCGC TGCGCGCCGAGCACGCGTTCAAGCGGCTGTCCGCCGCGGCCAAACGGGATTTCCTGCGCGCCCACGGCGATGCCGGCCCG TCATCCTGA
Upstream 100 bases:
>100_bases CGCACCGAGCGCGTGCTGATCAGCCCGCTGGCCGACGGCTTCGATGCCGCCATCTGAGCCTGAGCATGGACCGGGGCCGT CCAGGCCCTGGTTTCTCTAC
Downstream 100 bases:
>100_bases CGCCGCTTCCGCGCACTTTGCAAACAGCTGTAAAGACAGGCGTATTTACATATATGTACATATGTCTGTTTCAGACTATC TCTTCCAGGAAAGCTTAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MLRCADGALYTGVSTDVARRYRQHQAGKGARYTRLNPPLAVELVIEYPDRSAALRAEHAFKRLSAAAKRDFLRAHGDAGP SS
Sequences:
>Translated_82_residues MLRCADGALYTGVSTDVARRYRQHQAGKGARYTRLNPPLAVELVIEYPDRSAALRAEHAFKRLSAAAKRDFLRAHGDAGP SS >Mature_82_residues MLRCADGALYTGVSTDVARRYRQHQAGKGARYTRLNPPLAVELVIEYPDRSAALRAEHAFKRLSAAAKRDFLRAHGDAGP SS
Specific function: Unknown
COG id: COG2827
COG function: function code L; Predicted endonuclease containing a URI domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0213 family [H]
Homologues:
Organism=Escherichia coli, GI1789545, Length=68, Percent_Identity=48.5294117647059, Blast_Score=65, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000305 [H]
Pfam domain/function: PF01541 GIY-YIG [H]
EC number: NA
Molecular weight: Translated: 8997; Mature: 8997
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRCADGALYTGVSTDVARRYRQHQAGKGARYTRLNPPLAVELVIEYPDRSAALRAEHAF CCCCCCCCEECCCCHHHHHHHHHHCCCCCCCEEECCCCEEEEEEEECCCCCHHHHHHHHH KRLSAAAKRDFLRAHGDAGPSS HHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLRCADGALYTGVSTDVARRYRQHQAGKGARYTRLNPPLAVELVIEYPDRSAALRAEHAF CCCCCCCCEECCCCHHHHHHHHHHCCCCCCCEEECCCCEEEEEEEECCCCCHHHHHHHHH KRLSAAAKRDFLRAHGDAGPSS HHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA