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The map label for this gene is nrfE [H]

Identifier: 34499843

GI number: 34499843

Start: 4732121

End: 4733266

Strand: Direct

Name: nrfE [H]

Synonym: CV_4388

Alternate gene names: 34499843

Gene position: 4732121-4733266 (Clockwise)

Preceding gene: 34499842

Following gene: 34499844

Centisome position: 99.6

GC content: 68.06

Gene sequence:

>1146_bases
ATGGAACTGGCAACAACGAGATTCGACCGCCTGCCGCTGTGGCGCCGGCTGGACCGCTGGGACTGGGCGTACGCGCTGCT
GATCGCCGTCGCCGCCGGCTGCGCCTTCACCCTCTACCACCACGCGATGGATGCCTACGAGCAGGCGATCCTGGCCGGCT
CGGCGCTGGGCCTGGTCGCGCTGGGCTGGTTCTGGCCGGCCTGGCGCTGGTTCTTCCCGCTGGCGGGCGGGGTGGCGCTG
CTGGGCATCCAGCTGTACCAGCACGACCTCTCCCGCGGCCAGCAAGCGTTCTGGCTCAAGTACGCGTTGTCCAGCCAGTC
GGCGATCATGTGGATGTGCTCGCTGTTCTTCCTGGCCACCGCCGTGTACTGGATAGGCCTGGCCCGCCGCTCGGCCCAGC
TGGCCCGAATGGGGGCCGGCCTGACCTGGGCCGCGGCCGTGATGGGCCTGGCCGGCCTGTTCGTGCGCTGGTACGAAAGC
TATCTGATCGCGCCGGACGTCGGCCACATCCCGGTGTCCAACCTGTACGAAGTGTTCGTGCTGTTCACGCTGATCACCGC
GCTGATGTATCTGTACTACCAGGCCAAGTTCGCCGCCGCGCAATCCGGCGCGCTGGTGCTGCCGGTGATCAGCGCCGCGG
TCGGCTTCATCCTGTGGTACAGCTTCGACCGCCAGGCGCACGGCATCCAGCCGCTGATCCCGGCGCTGCAGTCGTGGTGG
ATGAAGATACACGTGCCGGCCAACTTCGTCGGCTACGGCGCCTTCTCGCTGGCCGCGATGCTGGGGCTGGGCGAGCTGAT
GGTGCAGAAGGGCTGGCTGAAGGACCGCCTGCCGGCGGCCGAGGTGCTGGACGAAATGATGTACCAGGCCATTTCCGTCG
GCTTCCTGTTCTTCACCATCGCCACCATCCTGGGCGCGATGTGGGCGGCCGACGCCTGGGGCGGCTACTGGAGCTGGGAC
CCGAAGGAAACCTGGGCGCTGATCGTCTGGCTGAACTACGCCGCCTGGCTGCACATCCGGCTGGTGAAGGGCTGGCGCGG
CGCGCCGCTGGCCTGGTGGGCGGTGATCGGCCTGGCCGTCACCACCTTCGCCTTCCTCGGCGTCAACATGTTCCTGTCCG
GCCTGCACTCCTACGGCGGCCTGTGA

Upstream 100 bases:

>100_bases
GGCTGCGGGTGGCCATGACCTCCAACCGCCATAACCGCGACCTGGATACCGACTTCCAGCGTCATCTCGACGCGATCAAA
CAGCTGACACGGGGAACATG

Downstream 100 bases:

>100_bases
ACCAGCCCGCTCCGACCCGCCCGGCTGCGCCGGGCTTTTTGCATTTTCCCTGCCCGGCGCGCCGTCATTTGGTATCCTTG
TAGCGTTTTTATCGCTTTTT

Product: cytochrome C-type biogenesis transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MELATTRFDRLPLWRRLDRWDWAYALLIAVAAGCAFTLYHHAMDAYEQAILAGSALGLVALGWFWPAWRWFFPLAGGVAL
LGIQLYQHDLSRGQQAFWLKYALSSQSAIMWMCSLFFLATAVYWIGLARRSAQLARMGAGLTWAAAVMGLAGLFVRWYES
YLIAPDVGHIPVSNLYEVFVLFTLITALMYLYYQAKFAAAQSGALVLPVISAAVGFILWYSFDRQAHGIQPLIPALQSWW
MKIHVPANFVGYGAFSLAAMLGLGELMVQKGWLKDRLPAAEVLDEMMYQAISVGFLFFTIATILGAMWAADAWGGYWSWD
PKETWALIVWLNYAAWLHIRLVKGWRGAPLAWWAVIGLAVTTFAFLGVNMFLSGLHSYGGL

Sequences:

>Translated_381_residues
MELATTRFDRLPLWRRLDRWDWAYALLIAVAAGCAFTLYHHAMDAYEQAILAGSALGLVALGWFWPAWRWFFPLAGGVAL
LGIQLYQHDLSRGQQAFWLKYALSSQSAIMWMCSLFFLATAVYWIGLARRSAQLARMGAGLTWAAAVMGLAGLFVRWYES
YLIAPDVGHIPVSNLYEVFVLFTLITALMYLYYQAKFAAAQSGALVLPVISAAVGFILWYSFDRQAHGIQPLIPALQSWW
MKIHVPANFVGYGAFSLAAMLGLGELMVQKGWLKDRLPAAEVLDEMMYQAISVGFLFFTIATILGAMWAADAWGGYWSWD
PKETWALIVWLNYAAWLHIRLVKGWRGAPLAWWAVIGLAVTTFAFLGVNMFLSGLHSYGGL
>Mature_381_residues
MELATTRFDRLPLWRRLDRWDWAYALLIAVAAGCAFTLYHHAMDAYEQAILAGSALGLVALGWFWPAWRWFFPLAGGVAL
LGIQLYQHDLSRGQQAFWLKYALSSQSAIMWMCSLFFLATAVYWIGLARRSAQLARMGAGLTWAAAVMGLAGLFVRWYES
YLIAPDVGHIPVSNLYEVFVLFTLITALMYLYYQAKFAAAQSGALVLPVISAAVGFILWYSFDRQAHGIQPLIPALQSWW
MKIHVPANFVGYGAFSLAAMLGLGELMVQKGWLKDRLPAAEVLDEMMYQAISVGFLFFTIATILGAMWAADAWGGYWSWD
PKETWALIVWLNYAAWLHIRLVKGWRGAPLAWWAVIGLAVTTFAFLGVNMFLSGLHSYGGL

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR017562 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 42712; Mature: 42712

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELATTRFDRLPLWRRLDRWDWAYALLIAVAAGCAFTLYHHAMDAYEQAILAGSALGLVA
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGWFWPAWRWFFPLAGGVALLGIQLYQHDLSRGQQAFWLKYALSSQSAIMWMCSLFFLAT
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
AVYWIGLARRSAQLARMGAGLTWAAAVMGLAGLFVRWYESYLIAPDVGHIPVSNLYEVFV
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
LFTLITALMYLYYQAKFAAAQSGALVLPVISAAVGFILWYSFDRQAHGIQPLIPALQSWW
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
MKIHVPANFVGYGAFSLAAMLGLGELMVQKGWLKDRLPAAEVLDEMMYQAISVGFLFFTI
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHH
ATILGAMWAADAWGGYWSWDPKETWALIVWLNYAAWLHIRLVKGWRGAPLAWWAVIGLAV
HHHHHHHHHHCCCCCCCCCCCCHHEEEEEHHHHHHHHHHHEECCCCCCCHHHHHHHHHHH
TTFAFLGVNMFLSGLHSYGGL
HHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MELATTRFDRLPLWRRLDRWDWAYALLIAVAAGCAFTLYHHAMDAYEQAILAGSALGLVA
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGWFWPAWRWFFPLAGGVALLGIQLYQHDLSRGQQAFWLKYALSSQSAIMWMCSLFFLAT
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
AVYWIGLARRSAQLARMGAGLTWAAAVMGLAGLFVRWYESYLIAPDVGHIPVSNLYEVFV
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
LFTLITALMYLYYQAKFAAAQSGALVLPVISAAVGFILWYSFDRQAHGIQPLIPALQSWW
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
MKIHVPANFVGYGAFSLAAMLGLGELMVQKGWLKDRLPAAEVLDEMMYQAISVGFLFFTI
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHH
ATILGAMWAADAWGGYWSWDPKETWALIVWLNYAAWLHIRLVKGWRGAPLAWWAVIGLAV
HHHHHHHHHHCCCCCCCCCCCCHHEEEEEHHHHHHHHHHHEECCCCCCCHHHHHHHHHHH
TTFAFLGVNMFLSGLHSYGGL
HHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA