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The map label for this gene is ccsB [H]

Identifier: 34499842

GI number: 34499842

Start: 4730085

End: 4732121

Strand: Direct

Name: ccsB [H]

Synonym: CV_4387

Alternate gene names: 34499842

Gene position: 4730085-4732121 (Clockwise)

Preceding gene: 34499841

Following gene: 34499843

Centisome position: 99.56

GC content: 66.62

Gene sequence:

>2037_bases
ATGTTCCGAATCATGAAAACAACAACACACCGTCGCCAAACCACGCCGCGCGCGCTGTACGAGCTGTTCAGCTCGATGCG
CTTCGCCATCGGCCTGCTCACCGTGCTCGGCATCGCCTCCATCATCGGCACCGTGCTCAAGCAGAACGAGCCCTATCCCA
ACTACGCCTTCGAATTCGGCCAGTTCTGGTTCCAGGCTTTCGAGATGCTCGGATTGTACGACGTCTACCATTCGGCTTGG
TTCCTGATCATCCTGGCCTTCCTGGTGCTGTCCACCACGCTGTGCATCCTGCGCAACGGCCCCGGCTTCATCAAGCAGAT
GCGCGGCTACCGCGAGCGGGCCAGCGACAACTCGCTGGCGGCGATGCCGCACAGCCAGGCGTTCGAGGCCGAGGCGGTCG
AGCCGTCCAGGCTGCTCGGCTACCTGCGCGGCCAGGGCTTCCGCTGGCGCGAGGCCGAACGCGAGGGCGGCGCGAGGCTG
ATCGCCGCCAAAAAGGGCGCCGCCGGCAAGCTGGGCTATTTCTGCGCCCACATCGCGCTGATCGTGATCTGCGTCGGCGG
CCTGCTGGACGGCAACCTGCCGCTGAAGCTGGGCGAGCTGGCCGGCCGCATCGTGCCGGAAACCCGCGACATCCCGCAAA
GCCGGATTCCGGAACAAAGCCGGCTGGGACCGGCCAACCTGTCCTTCCGCGGCAACGTCACCATCGCCGAGGGCAAGAGC
GCCGACGTCACCTTCCTCAATTCCGGCAACGGCTACCTGGTGCAGGAGCTGCCCTTCATCGTCTCGCTGAAGAAATTCCA
CGTCGACTACTACAGCAACGGCATGCCCAAGCTGTTCGCCAGCGACATCGTGGTGACGGACAAGGCCAGCGGCAAGACCA
CCGAAGCCACGGTCCAGGTCAACCACCCGCTGATCGTCGACGGCGTCGCCATCTACCAGTCCAGCTTCGGCGACGGCGGC
TCGCCGCTGAAACTGAAGGCCTGGAACCTGGCCGCGCCGGGCAGCGCGCCGGTGGCGCTCTCCGGCGTGTCGATGAGCAG
CCAGCCGCTGCGCGCCAACGGCAAGGACTACGCGCTGGAGTTCGGCGAGCTCAGGGTGTTCAACATCGAGAACGTCGCCA
AACCGGGCGAGGGCGACCCCACGCTGGGCCAGCGCATGCACGACGCGCGCGAGGTGAAGCAGCACAAGGATCTGAAGAAC
TACGGCCCGTCCATCACCTTCAAGCTGCGCGACGCCCAGGGCCAGGCGGTGGAGTACGTCCATTACATGGCGCCGATCGC
CCAGGACGGCGCCAGCTACCTGATGGCCGGCATGCGCAAGACGCCGGCCGATCCCTTCCAGTACCTGCGCATGCCGCTGG
ACGACGACATGCAGGTCGACCGCTTCATGCGCCTGTACGCCGCGCTGCGCGATCCGTCGCTGTACGACGAGGTCGCCGCG
CGCGCCACCCGCAAGGCGCAGCAGGGCGGCGTCATCGACGGCAAGCTGGCCAAGCAGTTCGGCGACAGCGTCAAGGGCGT
GCTGGAGCGCTTCGCCTCGGGCGGCTTCTCCGCGCTGGAGCAGTTCCTGGACGAGCGGGTGCCGGCCGACAAGCGCCAGG
CGGTGGCGCAGACCTATATCAAGATCCTGCAGGGCGCGGTGGTGGACGTGATGGCGGCGGCCGACGACAGGGCCGGCGCC
AAGCCGCTGGCCGCCGACGCCGCCCACTACCGCTTCCTGCTGGACGGCCTGGTGGCCGCCAGCGCGCTGCAGGACTACGG
CTCGCCGGTGTTCCTGCAACTGGAGGGCTTCGACCAGGTGCAGTCGTCCGGCCTGCAGCTGACCCGCTCGCCGGGCAAGA
CGCTGGTCTACCTGGGATCGGTCTTGCTGGTGCTGGGCATCGTGCTAATGTTCTATGTGCGCGAACAACGCCTGTGGATA
CGCATCGATGGCCGGCGGCTGCGGGTGGCCATGACCTCCAACCGCCATAACCGCGACCTGGATACCGACTTCCAGCGTCA
TCTCGACGCGATCAAACAGCTGACACGGGGAACATGA

Upstream 100 bases:

>100_bases
CCGGAGACCGGCCCGCCGCGCGGCGTCTTCCACGCGGCCGGACGCAACTTTGCCGCTCCGCCTCATTCAAAAGGGAAGCC
CCGGGCGGGCTTCCCTTTTT

Downstream 100 bases:

>100_bases
TGGAACTGGCAACAACGAGATTCGACCGCCTGCCGCTGTGGCGCCGGCTGGACCGCTGGGACTGGGCGTACGCGCTGCTG
ATCGCCGTCGCCGCCGGCTG

Product: cytochrome c-type biogenesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 678; Mature: 678

Protein sequence:

>678_residues
MFRIMKTTTHRRQTTPRALYELFSSMRFAIGLLTVLGIASIIGTVLKQNEPYPNYAFEFGQFWFQAFEMLGLYDVYHSAW
FLIILAFLVLSTTLCILRNGPGFIKQMRGYRERASDNSLAAMPHSQAFEAEAVEPSRLLGYLRGQGFRWREAEREGGARL
IAAKKGAAGKLGYFCAHIALIVICVGGLLDGNLPLKLGELAGRIVPETRDIPQSRIPEQSRLGPANLSFRGNVTIAEGKS
ADVTFLNSGNGYLVQELPFIVSLKKFHVDYYSNGMPKLFASDIVVTDKASGKTTEATVQVNHPLIVDGVAIYQSSFGDGG
SPLKLKAWNLAAPGSAPVALSGVSMSSQPLRANGKDYALEFGELRVFNIENVAKPGEGDPTLGQRMHDAREVKQHKDLKN
YGPSITFKLRDAQGQAVEYVHYMAPIAQDGASYLMAGMRKTPADPFQYLRMPLDDDMQVDRFMRLYAALRDPSLYDEVAA
RATRKAQQGGVIDGKLAKQFGDSVKGVLERFASGGFSALEQFLDERVPADKRQAVAQTYIKILQGAVVDVMAAADDRAGA
KPLAADAAHYRFLLDGLVAASALQDYGSPVFLQLEGFDQVQSSGLQLTRSPGKTLVYLGSVLLVLGIVLMFYVREQRLWI
RIDGRRLRVAMTSNRHNRDLDTDFQRHLDAIKQLTRGT

Sequences:

>Translated_678_residues
MFRIMKTTTHRRQTTPRALYELFSSMRFAIGLLTVLGIASIIGTVLKQNEPYPNYAFEFGQFWFQAFEMLGLYDVYHSAW
FLIILAFLVLSTTLCILRNGPGFIKQMRGYRERASDNSLAAMPHSQAFEAEAVEPSRLLGYLRGQGFRWREAEREGGARL
IAAKKGAAGKLGYFCAHIALIVICVGGLLDGNLPLKLGELAGRIVPETRDIPQSRIPEQSRLGPANLSFRGNVTIAEGKS
ADVTFLNSGNGYLVQELPFIVSLKKFHVDYYSNGMPKLFASDIVVTDKASGKTTEATVQVNHPLIVDGVAIYQSSFGDGG
SPLKLKAWNLAAPGSAPVALSGVSMSSQPLRANGKDYALEFGELRVFNIENVAKPGEGDPTLGQRMHDAREVKQHKDLKN
YGPSITFKLRDAQGQAVEYVHYMAPIAQDGASYLMAGMRKTPADPFQYLRMPLDDDMQVDRFMRLYAALRDPSLYDEVAA
RATRKAQQGGVIDGKLAKQFGDSVKGVLERFASGGFSALEQFLDERVPADKRQAVAQTYIKILQGAVVDVMAAADDRAGA
KPLAADAAHYRFLLDGLVAASALQDYGSPVFLQLEGFDQVQSSGLQLTRSPGKTLVYLGSVLLVLGIVLMFYVREQRLWI
RIDGRRLRVAMTSNRHNRDLDTDFQRHLDAIKQLTRGT
>Mature_678_residues
MFRIMKTTTHRRQTTPRALYELFSSMRFAIGLLTVLGIASIIGTVLKQNEPYPNYAFEFGQFWFQAFEMLGLYDVYHSAW
FLIILAFLVLSTTLCILRNGPGFIKQMRGYRERASDNSLAAMPHSQAFEAEAVEPSRLLGYLRGQGFRWREAEREGGARL
IAAKKGAAGKLGYFCAHIALIVICVGGLLDGNLPLKLGELAGRIVPETRDIPQSRIPEQSRLGPANLSFRGNVTIAEGKS
ADVTFLNSGNGYLVQELPFIVSLKKFHVDYYSNGMPKLFASDIVVTDKASGKTTEATVQVNHPLIVDGVAIYQSSFGDGG
SPLKLKAWNLAAPGSAPVALSGVSMSSQPLRANGKDYALEFGELRVFNIENVAKPGEGDPTLGQRMHDAREVKQHKDLKN
YGPSITFKLRDAQGQAVEYVHYMAPIAQDGASYLMAGMRKTPADPFQYLRMPLDDDMQVDRFMRLYAALRDPSLYDEVAA
RATRKAQQGGVIDGKLAKQFGDSVKGVLERFASGGFSALEQFLDERVPADKRQAVAQTYIKILQGAVVDVMAAADDRAGA
KPLAADAAHYRFLLDGLVAASALQDYGSPVFLQLEGFDQVQSSGLQLTRSPGKTLVYLGSVLLVLGIVLMFYVREQRLWI
RIDGRRLRVAMTSNRHNRDLDTDFQRHLDAIKQLTRGT

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG1333

COG function: function code O; ResB protein required for cytochrome c biosynthesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccs1/ccsB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007816 [H]

Pfam domain/function: PF05140 ResB [H]

EC number: NA

Molecular weight: Translated: 74798; Mature: 74798

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRIMKTTTHRRQTTPRALYELFSSMRFAIGLLTVLGIASIIGTVLKQNEPYPNYAFEFG
CCEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
QFWFQAFEMLGLYDVYHSAWFLIILAFLVLSTTLCILRNGPGFIKQMRGYRERASDNSLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEE
AMPHSQAFEAEAVEPSRLLGYLRGQGFRWREAEREGGARLIAAKKGAAGKLGYFCAHIAL
ECCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHCCCCEEEEECCCCCCHHHHHHHHHHH
IVICVGGLLDGNLPLKLGELAGRIVPETRDIPQSRIPEQSRLGPANLSFRGNVTIAEGKS
HHHHHHHHCCCCCCEEHHHHCCCCCCCCCCCCHHHCCHHHCCCCCCCEEECCEEEECCCC
ADVTFLNSGNGYLVQELPFIVSLKKFHVDYYSNGMPKLFASDIVVTDKASGKTTEATVQV
CCEEEEECCCCEEEECCHHHHHHHHHHHHHHCCCCCHHHHCCEEEECCCCCCCEEEEEEE
NHPLIVDGVAIYQSSFGDGGSPLKLKAWNLAAPGSAPVALSGVSMSSQPLRANGKDYALE
CCCEEECHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCEEEE
FGELRVFNIENVAKPGEGDPTLGQRMHDAREVKQHKDLKNYGPSITFKLRDAQGQAVEYV
ECCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHH
HYMAPIAQDGASYLMAGMRKTPADPFQYLRMPLDDDMQVDRFMRLYAALRDPSLYDEVAA
HHHHHHHHCHHHHHHHCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH
RATRKAQQGGVIDGKLAKQFGDSVKGVLERFASGGFSALEQFLDERVPADKRQAVAQTYI
HHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHH
KILQGAVVDVMAAADDRAGAKPLAADAAHYRFLLDGLVAASALQDYGSPVFLQLEGFDQV
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHH
QSSGLQLTRSPGKTLVYLGSVLLVLGIVLMFYVREQRLWIRIDGRRLRVAMTSNRHNRDL
HHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEEECCCCCCCC
DTDFQRHLDAIKQLTRGT
CHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFRIMKTTTHRRQTTPRALYELFSSMRFAIGLLTVLGIASIIGTVLKQNEPYPNYAFEFG
CCEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
QFWFQAFEMLGLYDVYHSAWFLIILAFLVLSTTLCILRNGPGFIKQMRGYRERASDNSLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEE
AMPHSQAFEAEAVEPSRLLGYLRGQGFRWREAEREGGARLIAAKKGAAGKLGYFCAHIAL
ECCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHCCCCEEEEECCCCCCHHHHHHHHHHH
IVICVGGLLDGNLPLKLGELAGRIVPETRDIPQSRIPEQSRLGPANLSFRGNVTIAEGKS
HHHHHHHHCCCCCCEEHHHHCCCCCCCCCCCCHHHCCHHHCCCCCCCEEECCEEEECCCC
ADVTFLNSGNGYLVQELPFIVSLKKFHVDYYSNGMPKLFASDIVVTDKASGKTTEATVQV
CCEEEEECCCCEEEECCHHHHHHHHHHHHHHCCCCCHHHHCCEEEECCCCCCCEEEEEEE
NHPLIVDGVAIYQSSFGDGGSPLKLKAWNLAAPGSAPVALSGVSMSSQPLRANGKDYALE
CCCEEECHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCEEEE
FGELRVFNIENVAKPGEGDPTLGQRMHDAREVKQHKDLKNYGPSITFKLRDAQGQAVEYV
ECCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHH
HYMAPIAQDGASYLMAGMRKTPADPFQYLRMPLDDDMQVDRFMRLYAALRDPSLYDEVAA
HHHHHHHHCHHHHHHHCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH
RATRKAQQGGVIDGKLAKQFGDSVKGVLERFASGGFSALEQFLDERVPADKRQAVAQTYI
HHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHH
KILQGAVVDVMAAADDRAGAKPLAADAAHYRFLLDGLVAASALQDYGSPVFLQLEGFDQV
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHH
QSSGLQLTRSPGKTLVYLGSVLLVLGIVLMFYVREQRLWIRIDGRRLRVAMTSNRHNRDL
HHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEEECCCCCCCC
DTDFQRHLDAIKQLTRGT
CHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 14621292 [H]