Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34499487

Identifier: 34499487

GI number: 34499487

Start: 4358791

End: 4359825

Strand: Reverse

Name: 34499487

Synonym: CV_4032

Alternate gene names: NA

Gene position: 4359825-4358791 (Counterclockwise)

Preceding gene: 34499488

Following gene: 34499486

Centisome position: 91.76

GC content: 60.58

Gene sequence:

>1035_bases
ATGGAAATTCGTCCCGAAATGTTTGGCCAGGCGCGCGCAGGCGCGGCATGGCCGGATTTCGGGAAGCCGCATGTCTTGCG
CTGCGATACGGGCCGCTCGGCGTTGAAGCTGGCGCTCCAGTGCTGGGCCGGCCGGGCCGGTCGCGATTTCACTGTTTGGC
TGCCGCACTACGTTTGCCACAGCGTCGCGCAGGCGGTTCGGCAGGCGGGGCATGCGCTTGCCTATTACGGTCATCGTCCC
TCCGAGCAGATTTTCTCGCCGCCGCCGACCCCGCAGGCGGGCGATCTCGTGCTGCTGGTCCATTACTTCGGCTTGCGCAA
TCGCGCCGCCTTAGACTGGTTATCCGCACATGCCACCCGCGATTTCGCCGTGCTGGAAGACTGTGTGCAGTCTCCCTATA
CCGCAGGCGTCGGGCGTTTGGCGGATTTCGCGATCAGCAGTCTGCGCAAATGGTGGCCCACGCCTGACGGCGCGACCTTG
GCCTCTGTTTATGCCCTGGATGGTCTAGACCTGGCTGCAAGCGACGAAGCGTTCATCAGCCAGAGAATGGCGGCAAAGCA
GTTGAGGGCGCGCGGCATAGGCGAAGAGCGCTATCTGCAATGGATAGATGAGTCCGAAAGCCGGCTGGATGACGTGGTGC
CGCGGCAGGCTTCTTGGCTGGCTGCCAGTCTGCTGGGCGAGGCGGATATCGACGTCGCCATGGCGGCGCGCAGAGAGAAC
TGGTTTGCGTTGGCGCAAGGCTTGGCGGGGCTGCGCGGCGTTGCTCCATTGTTCAGAGAATTGGCTGTCGATGAGATACC
ATTGGCCTACCCAGTTGTTGTATCCGCGACAAATAGGCAGAAGTTGCGCGCAGCTTTGAGAGATAGGCGAGTTTTCTGTC
CGGTGCATTGGGACCTGGAGTCTGACGCGCCAGAGGCGGATACATTGTTGTCCGCCCGTATTTTATCTATACCGCTTGAT
CAGCGTTATGCACCGGCAGATATGCGCAAGGTGGCGAGCATGATCGGCGAATTTATTGCTGAGGAATTGAATTGA

Upstream 100 bases:

>100_bases
GGCGCGTCCGCGCGCATGAAGCAGATTTTGTCGAGCGTTCCATTGCCGGCAAACTTGAAAAAGAGCTTCCATGACTTGTG
AGCGCAGCATAGGTGGCGAG

Downstream 100 bases:

>100_bases
ACCACGTATTTATTATTGCTGAAGCAGGCGTGAACCATAATGGTTCTTTGAAAGTGGCCCTTGAGTTGATCGATGCGGCC
AAGGAAGCTGGCGCCGACGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MEIRPEMFGQARAGAAWPDFGKPHVLRCDTGRSALKLALQCWAGRAGRDFTVWLPHYVCHSVAQAVRQAGHALAYYGHRP
SEQIFSPPPTPQAGDLVLLVHYFGLRNRAALDWLSAHATRDFAVLEDCVQSPYTAGVGRLADFAISSLRKWWPTPDGATL
ASVYALDGLDLAASDEAFISQRMAAKQLRARGIGEERYLQWIDESESRLDDVVPRQASWLAASLLGEADIDVAMAARREN
WFALAQGLAGLRGVAPLFRELAVDEIPLAYPVVVSATNRQKLRAALRDRRVFCPVHWDLESDAPEADTLLSARILSIPLD
QRYAPADMRKVASMIGEFIAEELN

Sequences:

>Translated_344_residues
MEIRPEMFGQARAGAAWPDFGKPHVLRCDTGRSALKLALQCWAGRAGRDFTVWLPHYVCHSVAQAVRQAGHALAYYGHRP
SEQIFSPPPTPQAGDLVLLVHYFGLRNRAALDWLSAHATRDFAVLEDCVQSPYTAGVGRLADFAISSLRKWWPTPDGATL
ASVYALDGLDLAASDEAFISQRMAAKQLRARGIGEERYLQWIDESESRLDDVVPRQASWLAASLLGEADIDVAMAARREN
WFALAQGLAGLRGVAPLFRELAVDEIPLAYPVVVSATNRQKLRAALRDRRVFCPVHWDLESDAPEADTLLSARILSIPLD
QRYAPADMRKVASMIGEFIAEELN
>Mature_344_residues
MEIRPEMFGQARAGAAWPDFGKPHVLRCDTGRSALKLALQCWAGRAGRDFTVWLPHYVCHSVAQAVRQAGHALAYYGHRP
SEQIFSPPPTPQAGDLVLLVHYFGLRNRAALDWLSAHATRDFAVLEDCVQSPYTAGVGRLADFAISSLRKWWPTPDGATL
ASVYALDGLDLAASDEAFISQRMAAKQLRARGIGEERYLQWIDESESRLDDVVPRQASWLAASLLGEADIDVAMAARREN
WFALAQGLAGLRGVAPLFRELAVDEIPLAYPVVVSATNRQKLRAALRDRRVFCPVHWDLESDAPEADTLLSARILSIPLD
QRYAPADMRKVASMIGEFIAEELN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38045; Mature: 38045

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIRPEMFGQARAGAAWPDFGKPHVLRCDTGRSALKLALQCWAGRAGRDFTVWLPHYVCH
CCCCHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCEEEEHHHHHHH
SVAQAVRQAGHALAYYGHRPSEQIFSPPPTPQAGDLVLLVHYFGLRNRAALDWLSAHATR
HHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHCCCCHHHHHHHHHHCCC
DFAVLEDCVQSPYTAGVGRLADFAISSLRKWWPTPDGATLASVYALDGLDLAASDEAFIS
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHH
QRMAAKQLRARGIGEERYLQWIDESESRLDDVVPRQASWLAASLLGEADIDVAMAARREN
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHH
WFALAQGLAGLRGVAPLFRELAVDEIPLAYPVVVSATNRQKLRAALRDRRVFCPVHWDLE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCEEEEEEEECCC
SDAPEADTLLSARILSIPLDQRYAPADMRKVASMIGEFIAEELN
CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEIRPEMFGQARAGAAWPDFGKPHVLRCDTGRSALKLALQCWAGRAGRDFTVWLPHYVCH
CCCCHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCEEEEHHHHHHH
SVAQAVRQAGHALAYYGHRPSEQIFSPPPTPQAGDLVLLVHYFGLRNRAALDWLSAHATR
HHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHCCCCHHHHHHHHHHCCC
DFAVLEDCVQSPYTAGVGRLADFAISSLRKWWPTPDGATLASVYALDGLDLAASDEAFIS
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHH
QRMAAKQLRARGIGEERYLQWIDESESRLDDVVPRQASWLAASLLGEADIDVAMAARREN
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHH
WFALAQGLAGLRGVAPLFRELAVDEIPLAYPVVVSATNRQKLRAALRDRRVFCPVHWDLE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCEEEEEEEECCC
SDAPEADTLLSARILSIPLDQRYAPADMRKVASMIGEFIAEELN
CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA