| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499484
Identifier: 34499484
GI number: 34499484
Start: 4355665
End: 4356663
Strand: Reverse
Name: 34499484
Synonym: CV_4029
Alternate gene names: NA
Gene position: 4356663-4355665 (Counterclockwise)
Preceding gene: 34499485
Following gene: 34499483
Centisome position: 91.7
GC content: 41.24
Gene sequence:
>999_bases ATGATGAAGCTGCTTTCCTTTGATGAAGCTTGCCAATGGTTCGACTCTCTGCCGGCACATAAAAGAATTGCAACGTTATC GCCTTATTATGTTCTTTTAGATGCATTGCGGGATACCCGATTGCTAGCGACCTATATCGGCTTTCGGCAGGGGGATGTCT TCTGGATGCATAGTGTGCATTGTTCTGCAGCCATGGCGGGTGAGGTGATCGACCTCCAATCACCATATGGTTATGGGGGG CCAATTAGTAATTGCGATGATCCTGTTTTTCTAAATATGGTCTGGGATTTATATGTAGAATTCTGTGCACGTCAGGGATG GTTGGCTGAGTTTGTCCGTTTTCATCCTCTTGGTGGCGTTTCTTCCAGTTATGGAGGGACGATAGTTGTAGATAGGCTAA CTGTCGCAATTGATCTGACTGGTCCTAATATTCGCTCAATTTATAGTACACGTTGTAGAACAGCTGTTCGAAAAGCAATA AATAATGGTTTAAACGTGCGAGTTGGAAGTGAAAGAGAGTTGAGAGAGATTTTCCCTCATTTTTACCGTGATGGTATGAG GGCTATTGCTGCAGATAAATTCTATTTATTTAATGATTTATACTTTTCAGGGTTCTCCACTTGGAAATGCGCAACACTCT TGATTTGTCATTGTGATGATGATTGGCTATCTGCAGGCATTTTTTTGAAGGATGGTAATGTTATGGAATACCACTTGTCT GCTACTACACCCGCAGGTAGAAATTTAGGTGCAACAAATCTGCTTTTAGATGCAGCTGCACATTTAGGCCAAGAGCAGGG TTGCTCATTCTTATATCTTGGTGGGGGGACGGATTCGGAAAAGAATAATCCATTGCTTTTCTTTAAGAGTGGATTTTCAG CTGCTACCTATCCATTTTTAATTGGATTTACTGCTTTTAATCAGGATAAATACCAGGCATTGAGAGAGAAATTTATTTCT GATCATAAGCCAACTGATCGGTTTCTTTTTTACCGTTGA
Upstream 100 bases:
>100_bases TTGCAGATCAGCGCAATGTCTCGATGTTCCCGATCCGCGAATATTGGCTGGATATCGGAAGGCCAGAAGATTTCGATGTG GCTCAAACGAGTATTGCCCA
Downstream 100 bases:
>100_bases TTAAAATGATTATGGGGAACAGAGTGTCTAAAGCGAAAGTTCTTGCATTAGTACCTGCTCGTGGTGGTTCAAAGCGATTG CCAGGGAAAAATATGAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MMKLLSFDEACQWFDSLPAHKRIATLSPYYVLLDALRDTRLLATYIGFRQGDVFWMHSVHCSAAMAGEVIDLQSPYGYGG PISNCDDPVFLNMVWDLYVEFCARQGWLAEFVRFHPLGGVSSSYGGTIVVDRLTVAIDLTGPNIRSIYSTRCRTAVRKAI NNGLNVRVGSERELREIFPHFYRDGMRAIAADKFYLFNDLYFSGFSTWKCATLLICHCDDDWLSAGIFLKDGNVMEYHLS ATTPAGRNLGATNLLLDAAAHLGQEQGCSFLYLGGGTDSEKNNPLLFFKSGFSAATYPFLIGFTAFNQDKYQALREKFIS DHKPTDRFLFYR
Sequences:
>Translated_332_residues MMKLLSFDEACQWFDSLPAHKRIATLSPYYVLLDALRDTRLLATYIGFRQGDVFWMHSVHCSAAMAGEVIDLQSPYGYGG PISNCDDPVFLNMVWDLYVEFCARQGWLAEFVRFHPLGGVSSSYGGTIVVDRLTVAIDLTGPNIRSIYSTRCRTAVRKAI NNGLNVRVGSERELREIFPHFYRDGMRAIAADKFYLFNDLYFSGFSTWKCATLLICHCDDDWLSAGIFLKDGNVMEYHLS ATTPAGRNLGATNLLLDAAAHLGQEQGCSFLYLGGGTDSEKNNPLLFFKSGFSAATYPFLIGFTAFNQDKYQALREKFIS DHKPTDRFLFYR >Mature_332_residues MMKLLSFDEACQWFDSLPAHKRIATLSPYYVLLDALRDTRLLATYIGFRQGDVFWMHSVHCSAAMAGEVIDLQSPYGYGG PISNCDDPVFLNMVWDLYVEFCARQGWLAEFVRFHPLGGVSSSYGGTIVVDRLTVAIDLTGPNIRSIYSTRCRTAVRKAI NNGLNVRVGSERELREIFPHFYRDGMRAIAADKFYLFNDLYFSGFSTWKCATLLICHCDDDWLSAGIFLKDGNVMEYHLS ATTPAGRNLGATNLLLDAAAHLGQEQGCSFLYLGGGTDSEKNNPLLFFKSGFSAATYPFLIGFTAFNQDKYQALREKFIS DHKPTDRFLFYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37417; Mature: 37417
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKLLSFDEACQWFDSLPAHKRIATLSPYYVLLDALRDTRLLATYIGFRQGDVFWMHSVH CCCCCCHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECH CSAAMAGEVIDLQSPYGYGGPISNCDDPVFLNMVWDLYVEFCARQGWLAEFVRFHPLGGV HHHHHCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC SSSYGGTIVVDRLTVAIDLTGPNIRSIYSTRCRTAVRKAINNGLNVRVGSERELREIFPH CCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHH FYRDGMRAIAADKFYLFNDLYFSGFSTWKCATLLICHCDDDWLSAGIFLKDGNVMEYHLS HHHHHHHHHHHCCEEEEEHHHHCCCCCCEEEEEEEEECCCHHHHCCEEEECCCEEEEEEE ATTPAGRNLGATNLLLDAAAHLGQEQGCSFLYLGGGTDSEKNNPLLFFKSGFSAATYPFL ECCCCCCCCCHHHHHHHHHHHCCHHHCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCEE IGFTAFNQDKYQALREKFISDHKPTDRFLFYR EEEEECCCHHHHHHHHHHHCCCCCCCCEEEEC >Mature Secondary Structure MMKLLSFDEACQWFDSLPAHKRIATLSPYYVLLDALRDTRLLATYIGFRQGDVFWMHSVH CCCCCCHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECH CSAAMAGEVIDLQSPYGYGGPISNCDDPVFLNMVWDLYVEFCARQGWLAEFVRFHPLGGV HHHHHCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC SSSYGGTIVVDRLTVAIDLTGPNIRSIYSTRCRTAVRKAINNGLNVRVGSERELREIFPH CCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHH FYRDGMRAIAADKFYLFNDLYFSGFSTWKCATLLICHCDDDWLSAGIFLKDGNVMEYHLS HHHHHHHHHHHCCEEEEEHHHHCCCCCCEEEEEEEEECCCHHHHCCEEEECCCEEEEEEE ATTPAGRNLGATNLLLDAAAHLGQEQGCSFLYLGGGTDSEKNNPLLFFKSGFSAATYPFL ECCCCCCCCCHHHHHHHHHHHCCHHHCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCEE IGFTAFNQDKYQALREKFISDHKPTDRFLFYR EEEEECCCHHHHHHHHHHHCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA