| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is mpg1 [H]
Identifier: 34499485
GI number: 34499485
Start: 4356660
End: 4357706
Strand: Reverse
Name: mpg1 [H]
Synonym: CV_4030
Alternate gene names: 34499485
Gene position: 4357706-4356660 (Counterclockwise)
Preceding gene: 34499486
Following gene: 34499484
Centisome position: 91.72
GC content: 51.67
Gene sequence:
>1047_bases ATGGCGCATGATTGGGAAAAGGTACTGCTGTCTCCTGATACGCCTGCTGAATCAGCGTTGAGAGTGCTGGATGACAGTGG CTTGCGATTGGTGCTGGTTGTTGATGAGCAGCGACGCCTACTTGGCACCCTGACGGATGGAGACGTGCGCAGGGCGTTGC TTCGCCATGTCAATTTCATGACCGCCGCCGTTGCGGACATCATGCACCGCGAGCCCCGGGTCGCGCTCGCCAGCGCTAGC CGCGAACAATTGCGTCACCTGATGGAACAGCATTCCCTGTTGCATATCCCTTTGCTGGATCACGATGATCGAGTGGTTGG CCTGGAAACCTACCAGGAGGTTCTGCAGCGCCCGCGCCGCGACAATTGGGTATTTTTGATGGCTGGTGGTTTCGGAAAAC GCTTACGGCCATTGACTGACAACTGCCCGAAACCGATGTTGCTGGTGGGTGGCAAACCGATGTTGCAAACCATATTGGAA GGCTTCATCGCTGCGGGCTTCCACCGGTTTTATATTTCCGTTCATTATCTGCCGGAAACTATCAAGAACTATTTTGGCGA TGGCTCTAAATGGGGTGTAACGATAGTTTATATCGAAGAGGATCAGCCTTTGGGGACAGGCGGCGCATTGGGTTTGTTGC CTGGGACGGATGATTTGCCAATCATCATGATGAATGGCGATATTTTGACCCGCCTCGATTTTAATGCCTTGCTCGATTTT CATGAAAAGCATGCGGCGGATTTGACGCTCTGCGTACGCGAGTACGATGTGCAAATCCCGTTTGGCGTTGTGGAAGGCAA CGATGTGACGGTCACATCCATTGTCGAGAAGCCAAAGCATCGCTTTTTTGTCAATGCTGGTATCTATGTTGTTACGCCGC AAGCAATTGCACGTGTATTACCATCCATGCGCGTAGACATGCCTGATTTGATTAAACAGATCATTGCAGATCAGCGCAAT GTCTCGATGTTCCCGATCCGCGAATATTGGCTGGATATCGGAAGGCCAGAAGATTTCGATGTGGCTCAAACGAGTATTGC CCAATGA
Upstream 100 bases:
>100_bases GCGATGGCGTGTCGCCGTATCGTTTCTGGGATTTCATCGGTAAACCAGCCACCAGGGATTATCGCGCCGACGAAAAACTG GACGCCGGATTGGAGTAATC
Downstream 100 bases:
>100_bases TGAAGCTGCTTTCCTTTGATGAAGCTTGCCAATGGTTCGACTCTCTGCCGGCACATAAAAGAATTGCAACGTTATCGCCT TATTATGTTCTTTTAGATGC
Product: sugar-phosphate nucleotide transferase
Products: NA
Alternate protein names: ATP-mannose-1-phosphate guanylyltransferase; GDP-mannose pyrophosphorylase; NDP-hexose pyrophosphorylase [H]
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MAHDWEKVLLSPDTPAESALRVLDDSGLRLVLVVDEQRRLLGTLTDGDVRRALLRHVNFMTAAVADIMHREPRVALASAS REQLRHLMEQHSLLHIPLLDHDDRVVGLETYQEVLQRPRRDNWVFLMAGGFGKRLRPLTDNCPKPMLLVGGKPMLQTILE GFIAAGFHRFYISVHYLPETIKNYFGDGSKWGVTIVYIEEDQPLGTGGALGLLPGTDDLPIIMMNGDILTRLDFNALLDF HEKHAADLTLCVREYDVQIPFGVVEGNDVTVTSIVEKPKHRFFVNAGIYVVTPQAIARVLPSMRVDMPDLIKQIIADQRN VSMFPIREYWLDIGRPEDFDVAQTSIAQ
Sequences:
>Translated_348_residues MAHDWEKVLLSPDTPAESALRVLDDSGLRLVLVVDEQRRLLGTLTDGDVRRALLRHVNFMTAAVADIMHREPRVALASAS REQLRHLMEQHSLLHIPLLDHDDRVVGLETYQEVLQRPRRDNWVFLMAGGFGKRLRPLTDNCPKPMLLVGGKPMLQTILE GFIAAGFHRFYISVHYLPETIKNYFGDGSKWGVTIVYIEEDQPLGTGGALGLLPGTDDLPIIMMNGDILTRLDFNALLDF HEKHAADLTLCVREYDVQIPFGVVEGNDVTVTSIVEKPKHRFFVNAGIYVVTPQAIARVLPSMRVDMPDLIKQIIADQRN VSMFPIREYWLDIGRPEDFDVAQTSIAQ >Mature_347_residues AHDWEKVLLSPDTPAESALRVLDDSGLRLVLVVDEQRRLLGTLTDGDVRRALLRHVNFMTAAVADIMHREPRVALASASR EQLRHLMEQHSLLHIPLLDHDDRVVGLETYQEVLQRPRRDNWVFLMAGGFGKRLRPLTDNCPKPMLLVGGKPMLQTILEG FIAAGFHRFYISVHYLPETIKNYFGDGSKWGVTIVYIEEDQPLGTGGALGLLPGTDDLPIIMMNGDILTRLDFNALLDFH EKHAADLTLCVREYDVQIPFGVVEGNDVTVTSIVEKPKHRFFVNAGIYVVTPQAIARVLPSMRVDMPDLIKQIIADQRNV SMFPIREYWLDIGRPEDFDVAQTSIAQ
Specific function: Catalyzes The Formation Of Dtdp-Glucose, From Dttp And Glucose 1-Phosphate, As Well As Its Pyrophosphorolysis. [C]
COG id: COG1208
COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Homo sapiens, GI11761621, Length=226, Percent_Identity=30.9734513274336, Blast_Score=111, Evalue=9e-25, Organism=Homo sapiens, GI11761619, Length=226, Percent_Identity=30.9734513274336, Blast_Score=111, Evalue=1e-24, Organism=Caenorhabditis elegans, GI133931050, Length=224, Percent_Identity=29.0178571428571, Blast_Score=106, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6320148, Length=231, Percent_Identity=32.034632034632, Blast_Score=119, Evalue=7e-28, Organism=Drosophila melanogaster, GI21355443, Length=225, Percent_Identity=29.3333333333333, Blast_Score=112, Evalue=3e-25, Organism=Drosophila melanogaster, GI24644084, Length=225, Percent_Identity=29.3333333333333, Blast_Score=112, Evalue=3e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.13 [H]
Molecular weight: Translated: 39278; Mature: 39147
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHDWEKVLLSPDTPAESALRVLDDSGLRLVLVVDEQRRLLGTLTDGDVRRALLRHVNFM CCCCCHHEEECCCCCHHHHHHHHCCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHHHH TAAVADIMHREPRVALASASREQLRHLMEQHSLLHIPLLDHDDRVVGLETYQEVLQRPRR HHHHHHHHHCCCCHHHHHCCHHHHHHHHHHCCEEEEEEECCCCCEECHHHHHHHHHCCCC DNWVFLMAGGFGKRLRPLTDNCPKPMLLVGGKPMLQTILEGFIAAGFHRFYISVHYLPET CCEEEEEECCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCEEEEEEEEEECHHH IKNYFGDGSKWGVTIVYIEEDQPLGTGGALGLLPGTDDLPIIMMNGDILTRLDFNALLDF HHHHCCCCCCCCEEEEEEECCCCCCCCCCEEECCCCCCCEEEEECCCEEEEECHHHHHHH HEKHAADLTLCVREYDVQIPFGVVEGNDVTVTSIVEKPKHRFFVNAGIYVVTPQAIARVL HHHHHCHHEEEEEHHCEECCEEEECCCCEEEEHHHHCCCCEEEEECCEEEECHHHHHHHH PSMRVDMPDLIKQIIADQRNVSMFPIREYWLDIGRPEDFDVAQTSIAQ HHCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHCCCCCCCCHHHHHCCC >Mature Secondary Structure AHDWEKVLLSPDTPAESALRVLDDSGLRLVLVVDEQRRLLGTLTDGDVRRALLRHVNFM CCCCHHEEECCCCCHHHHHHHHCCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHHHH TAAVADIMHREPRVALASASREQLRHLMEQHSLLHIPLLDHDDRVVGLETYQEVLQRPRR HHHHHHHHHCCCCHHHHHCCHHHHHHHHHHCCEEEEEEECCCCCEECHHHHHHHHHCCCC DNWVFLMAGGFGKRLRPLTDNCPKPMLLVGGKPMLQTILEGFIAAGFHRFYISVHYLPET CCEEEEEECCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCEEEEEEEEEECHHH IKNYFGDGSKWGVTIVYIEEDQPLGTGGALGLLPGTDDLPIIMMNGDILTRLDFNALLDF HHHHCCCCCCCCEEEEEEECCCCCCCCCCEEECCCCCCCEEEEECCCEEEEECHHHHHHH HEKHAADLTLCVREYDVQIPFGVVEGNDVTVTSIVEKPKHRFFVNAGIYVVTPQAIARVL HHHHHCHHEEEEEHHCEECCEEEECCCCEEEEHHHHCCCCEEEEECCEEEECHHHHHHHH PSMRVDMPDLIKQIIADQRNVSMFPIREYWLDIGRPEDFDVAQTSIAQ HHCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHCCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8334170 [H]