| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499482
Identifier: 34499482
GI number: 34499482
Start: 4353690
End: 4354904
Strand: Reverse
Name: 34499482
Synonym: CV_4027
Alternate gene names: NA
Gene position: 4354904-4353690 (Counterclockwise)
Preceding gene: 34499483
Following gene: 34499481
Centisome position: 91.66
GC content: 36.46
Gene sequence:
>1215_bases ATGGAAATTGCTTATGCGCTACTTATAATTTATTTAATAGCTCCTTATGTTGGCCTCTTCTATTTTGAATCGAGTGGCGA GCGCATTATATATGGAGATGCAAATAGTGCTATATGGCCATATTCTATTTACCTGCTCATATTTTTTGCAATAGTTTTGT TGTTTAATTTAAATAACAAGGCAAAATTAACTGTATTTTCCATATACCCGGAGTGGTTGGCAAGAAAAATAATAAAGCGT TGCATATGCATTTTGATATTTTGTATTGGCATGATGTTTGTTTATGGCGTCGGCAATATGCTGACGGGTGAGACTGGTCG TGGAGAGTTTAGATCAACTTTAGGAGGGTTAGGTTTTTTTTATATTCTTTTTTCATTATTTTTCCCTGCATCATGTGTCG CAATTTCAGCGCAAATGTGGGTGAAATCAAGGAGTAAAAAGATAGGATTATGGTTTGCTCTTTGTTTTTTTCTCGGCTTC ATTTGTGGCTTTTTGACTGGGTTTAAATTTACTTGTTTTCTGATTTCGACTCCTGGATTAATTTTAGCCGCTCCGAGGTT AGGGGTGACAAAGATTTTTTTTGTTTTAGCTCTTTCAATTGCTTTTATGTTATTTTCGGCAACCTATTTTATGGGGTTAG ATACTTTAGACGCCCTAAATTATTTAATACAACGTGGTACAGTTGTTGCCGTGTCAGGAACAGTTGGTGTATGGAATAAT TTTAGAGATGGCGGGCCGGATGCAATATATACCTTGCTGTATGCTTTAGGTAATAAAGCGGCATCTTTTTTAATTGGTGA GCCCGTTGACTCGTTTAACTTTCTTAAAGTAAATTTGACTAGATATATAGGGTATTTAACTTATCCAAAACCAGAGGAGG CATTGTCTGGTGCTTTTAATCTTACAGTAACAAACTTTGGGGAGGCTGTCTATTTTTTTGGGGAGAGTTTTTCCTGGGTG TTTGCAATTATTTCTGGGCTTATAACGGCCTTTATGCTACGGAGTGCAAAAAAGGCCATTTGCAACGGGAGTGATATTAA AGCAATTGTTTTGGTCAACTTCCTCGCGTTGGTGATATTTCCTTGGCTTTTAAACTCTATGATTGGTAACCTTTTTGGAA TCCCGACTATTATATATTTTACATTTGTAATACTATTGGTTAATAACTGTACCAAGCCACTGCGTGATTGGCGTAGATCA CAGGCGATAAATTGA
Upstream 100 bases:
>100_bases ATATTGACACTCAAGAAGATTGGGATTTGGCGGAAGAAAAACTTGCTCATATTTTTGGTCTGAATAATAAAAGTAGTTCG TAACGTTAGGGAGGCTGCTT
Downstream 100 bases:
>100_bases ACCGGCAGCAAATCAGATGTTAAAAGAAATGCTATATGCGTGTGACTAAAATGCTCTACTGTGTTGATAACAAAGTGCTG AAACATACTGAATCGATACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MEIAYALLIIYLIAPYVGLFYFESSGERIIYGDANSAIWPYSIYLLIFFAIVLLFNLNNKAKLTVFSIYPEWLARKIIKR CICILIFCIGMMFVYGVGNMLTGETGRGEFRSTLGGLGFFYILFSLFFPASCVAISAQMWVKSRSKKIGLWFALCFFLGF ICGFLTGFKFTCFLISTPGLILAAPRLGVTKIFFVLALSIAFMLFSATYFMGLDTLDALNYLIQRGTVVAVSGTVGVWNN FRDGGPDAIYTLLYALGNKAASFLIGEPVDSFNFLKVNLTRYIGYLTYPKPEEALSGAFNLTVTNFGEAVYFFGESFSWV FAIISGLITAFMLRSAKKAICNGSDIKAIVLVNFLALVIFPWLLNSMIGNLFGIPTIIYFTFVILLVNNCTKPLRDWRRS QAIN
Sequences:
>Translated_404_residues MEIAYALLIIYLIAPYVGLFYFESSGERIIYGDANSAIWPYSIYLLIFFAIVLLFNLNNKAKLTVFSIYPEWLARKIIKR CICILIFCIGMMFVYGVGNMLTGETGRGEFRSTLGGLGFFYILFSLFFPASCVAISAQMWVKSRSKKIGLWFALCFFLGF ICGFLTGFKFTCFLISTPGLILAAPRLGVTKIFFVLALSIAFMLFSATYFMGLDTLDALNYLIQRGTVVAVSGTVGVWNN FRDGGPDAIYTLLYALGNKAASFLIGEPVDSFNFLKVNLTRYIGYLTYPKPEEALSGAFNLTVTNFGEAVYFFGESFSWV FAIISGLITAFMLRSAKKAICNGSDIKAIVLVNFLALVIFPWLLNSMIGNLFGIPTIIYFTFVILLVNNCTKPLRDWRRS QAIN >Mature_404_residues MEIAYALLIIYLIAPYVGLFYFESSGERIIYGDANSAIWPYSIYLLIFFAIVLLFNLNNKAKLTVFSIYPEWLARKIIKR CICILIFCIGMMFVYGVGNMLTGETGRGEFRSTLGGLGFFYILFSLFFPASCVAISAQMWVKSRSKKIGLWFALCFFLGF ICGFLTGFKFTCFLISTPGLILAAPRLGVTKIFFVLALSIAFMLFSATYFMGLDTLDALNYLIQRGTVVAVSGTVGVWNN FRDGGPDAIYTLLYALGNKAASFLIGEPVDSFNFLKVNLTRYIGYLTYPKPEEALSGAFNLTVTNFGEAVYFFGESFSWV FAIISGLITAFMLRSAKKAICNGSDIKAIVLVNFLALVIFPWLLNSMIGNLFGIPTIIYFTFVILLVNNCTKPLRDWRRS QAIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45155; Mature: 45155
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIAYALLIIYLIAPYVGLFYFESSGERIIYGDANSAIWPYSIYLLIFFAIVLLFNLNNK CHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCC AKLTVFSIYPEWLARKIIKRCICILIFCIGMMFVYGVGNMLTGETGRGEFRSTLGGLGFF CEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH YILFSLFFPASCVAISAQMWVKSRSKKIGLWFALCFFLGFICGFLTGFKFTCFLISTPGL HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCC ILAAPRLGVTKIFFVLALSIAFMLFSATYFMGLDTLDALNYLIQRGTVVAVSGTVGVWNN EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC FRDGGPDAIYTLLYALGNKAASFLIGEPVDSFNFLKVNLTRYIGYLTYPKPEEALSGAFN CCCCCHHHHHHHHHHHCCHHHHHEECCCCCCCCEEEEEHHHHHHHCCCCCHHHHHCCCEE LTVTNFGEAVYFFGESFSWVFAIISGLITAFMLRSAKKAICNGSDIKAIVLVNFLALVIF EEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH PWLLNSMIGNLFGIPTIIYFTFVILLVNNCTKPLRDWRRSQAIN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC >Mature Secondary Structure MEIAYALLIIYLIAPYVGLFYFESSGERIIYGDANSAIWPYSIYLLIFFAIVLLFNLNNK CHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCC AKLTVFSIYPEWLARKIIKRCICILIFCIGMMFVYGVGNMLTGETGRGEFRSTLGGLGFF CEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH YILFSLFFPASCVAISAQMWVKSRSKKIGLWFALCFFLGFICGFLTGFKFTCFLISTPGL HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCC ILAAPRLGVTKIFFVLALSIAFMLFSATYFMGLDTLDALNYLIQRGTVVAVSGTVGVWNN EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC FRDGGPDAIYTLLYALGNKAASFLIGEPVDSFNFLKVNLTRYIGYLTYPKPEEALSGAFN CCCCCHHHHHHHHHHHCCHHHHHEECCCCCCCCEEEEEHHHHHHHCCCCCHHHHHCCCEE LTVTNFGEAVYFFGESFSWVFAIISGLITAFMLRSAKKAICNGSDIKAIVLVNFLALVIF EEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH PWLLNSMIGNLFGIPTIIYFTFVILLVNNCTKPLRDWRRSQAIN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA