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The map label for this gene is 34499481

Identifier: 34499481

GI number: 34499481

Start: 4352230

End: 4353489

Strand: Reverse

Name: 34499481

Synonym: CV_4026

Alternate gene names: NA

Gene position: 4353489-4352230 (Counterclockwise)

Preceding gene: 34499482

Following gene: 34499480

Centisome position: 91.63

GC content: 36.43

Gene sequence:

>1260_bases
GTGAGAAAAATTTTCTCAATTTTTTCTGCTTTCATTTTAGTCAATATAATTAGAGTGGTGTCTCCTTTCTTGCTATTGCC
GCTTTTAACGCACGCTTTAACTCCTTCAGATTATGGCATTCTTTCGTTGTATGATGCTTCTGTGTTGGTGTTGGTTCCTT
TGGTACTATTCAACTCGCCAGGACTAGTAGGTGCACGATTTTATAAAACTAGCAAAGGTTATATTGCTGAGGTTAATACT
GCGGCACTATTTTTGACAGTATTGTGTTGTTGTATATTGTTTTTTTTCTTGCTTTGTTTCAGTGCAGCTGAACTATTTTA
TAATAGCTTCGGTGGTGAGTTTATCTTGCTCTTGCCGGTTTTTGTATTAGCAAGAGCTATAAATACTTATTTGGCAGGGC
TCCTGCAGACGCAGCATAAGGTAAGAATGTTTGGAGTCTTCTCAATTGGGACATTATTTCTCGATTTAGGCTTGTCATTA
ATTTTCGTGTCTTTTTTTTCCATGGGCTATAAAGGACGTTTGATTGCAAGCAGTTTTGCCTTTCTCATATTTAGTTTTTA
TGGGATTTGCCTGATGAGGAGAGATCAGTTGCTTTCTCCTTTTTTAATGCGAGAAAGAATTGTAGACATTTTCGAATTTG
GTTTACCATTAATTCCTCATGCTTTAGGTGGCGTCAGCCTGGCAGTATCAAGTCGTTATCTAATTGCATATATGTTAGGT
CAAGGTGCGGCTGGTGTTTATGCTGTTGGCTATCAAGTAGGATCAATTATGTTACTAGTTGGAACCTCTATTAATCAAGC
ATGGTCAGTTTCATTGTTCAAGTGGCTTGGAGAAGGAATTGAGAAAAGTCGAAGTATGATAAGAAAAGTTATGATGGGAT
TGTTTTTCTTGTTGCTAACATCTTTGGCCATGTTGTGGTTTTGTAGAGATTTTGTATTCTGGTTGCTGTCCAATCATCAT
TTTGAGGATGCAAAGCTACTTTATCCTTATATGTTGATAGGATTTTTCTTTCAGTCTTTATATTTTCTGATTGTCAATTT
TGATTTTTACGAAGAAAAAGTTAAATCTATTGGTATTACAACTTTCTTTACATCGATTCTCAGTTTGCTCCTCTGCTATG
TATTAGTAAAGCAATACGGCCTCATTGGTGCAGGTTACTCATACGCAATCAGTATGTTTTTTTATTTTGCTGTGGTCTTG
ATTCGGGTGGTTGGCTTTAATATGAAATTCCGAGGGGTTTGGCTGCGAAATGGAAAATAA

Upstream 100 bases:

>100_bases
AAATATATAAACGATTATTTATTCGGCTTGCGCAGGCTATGGGGAAGCTATACGCAAAATTTATAATAAGATAGATTTGT
AGAAGGTAAAGGGTAAGGGC

Downstream 100 bases:

>100_bases
TGGAAACGCCTGCCTTCGAGTTTTGAAAACGTTAGAGGCTGAAGGCGAGATAGCAACGAAATTTTCTACAATGGGAACTT
CAAGTTGGGTATCTATAAAA

Product: lipopolysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MRKIFSIFSAFILVNIIRVVSPFLLLPLLTHALTPSDYGILSLYDASVLVLVPLVLFNSPGLVGARFYKTSKGYIAEVNT
AALFLTVLCCCILFFFLLCFSAAELFYNSFGGEFILLLPVFVLARAINTYLAGLLQTQHKVRMFGVFSIGTLFLDLGLSL
IFVSFFSMGYKGRLIASSFAFLIFSFYGICLMRRDQLLSPFLMRERIVDIFEFGLPLIPHALGGVSLAVSSRYLIAYMLG
QGAAGVYAVGYQVGSIMLLVGTSINQAWSVSLFKWLGEGIEKSRSMIRKVMMGLFFLLLTSLAMLWFCRDFVFWLLSNHH
FEDAKLLYPYMLIGFFFQSLYFLIVNFDFYEEKVKSIGITTFFTSILSLLLCYVLVKQYGLIGAGYSYAISMFFYFAVVL
IRVVGFNMKFRGVWLRNGK

Sequences:

>Translated_419_residues
MRKIFSIFSAFILVNIIRVVSPFLLLPLLTHALTPSDYGILSLYDASVLVLVPLVLFNSPGLVGARFYKTSKGYIAEVNT
AALFLTVLCCCILFFFLLCFSAAELFYNSFGGEFILLLPVFVLARAINTYLAGLLQTQHKVRMFGVFSIGTLFLDLGLSL
IFVSFFSMGYKGRLIASSFAFLIFSFYGICLMRRDQLLSPFLMRERIVDIFEFGLPLIPHALGGVSLAVSSRYLIAYMLG
QGAAGVYAVGYQVGSIMLLVGTSINQAWSVSLFKWLGEGIEKSRSMIRKVMMGLFFLLLTSLAMLWFCRDFVFWLLSNHH
FEDAKLLYPYMLIGFFFQSLYFLIVNFDFYEEKVKSIGITTFFTSILSLLLCYVLVKQYGLIGAGYSYAISMFFYFAVVL
IRVVGFNMKFRGVWLRNGK
>Mature_419_residues
MRKIFSIFSAFILVNIIRVVSPFLLLPLLTHALTPSDYGILSLYDASVLVLVPLVLFNSPGLVGARFYKTSKGYIAEVNT
AALFLTVLCCCILFFFLLCFSAAELFYNSFGGEFILLLPVFVLARAINTYLAGLLQTQHKVRMFGVFSIGTLFLDLGLSL
IFVSFFSMGYKGRLIASSFAFLIFSFYGICLMRRDQLLSPFLMRERIVDIFEFGLPLIPHALGGVSLAVSSRYLIAYMLG
QGAAGVYAVGYQVGSIMLLVGTSINQAWSVSLFKWLGEGIEKSRSMIRKVMMGLFFLLLTSLAMLWFCRDFVFWLLSNHH
FEDAKLLYPYMLIGFFFQSLYFLIVNFDFYEEKVKSIGITTFFTSILSLLLCYVLVKQYGLIGAGYSYAISMFFYFAVVL
IRVVGFNMKFRGVWLRNGK

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family. HI_0867/HI_1700 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 47377; Mature: 47377

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIFSIFSAFILVNIIRVVSPFLLLPLLTHALTPSDYGILSLYDASVLVLVPLVLFNSP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCC
GLVGARFYKTSKGYIAEVNTAALFLTVLCCCILFFFLLCFSAAELFYNSFGGEFILLLPV
CCCHHHHEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
FVLARAINTYLAGLLQTQHKVRMFGVFSIGTLFLDLGLSLIFVSFFSMGYKGRLIASSFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
FLIFSFYGICLMRRDQLLSPFLMRERIVDIFEFGLPLIPHALGGVSLAVSSRYLIAYMLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHC
QGAAGVYAVGYQVGSIMLLVGTSINQAWSVSLFKWLGEGIEKSRSMIRKVMMGLFFLLLT
CCCCCHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLAMLWFCRDFVFWLLSNHHFEDAKLLYPYMLIGFFFQSLYFLIVNFDFYEEKVKSIGIT
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFFTSILSLLLCYVLVKQYGLIGAGYSYAISMFFYFAVVLIRVVGFNMKFRGVWLRNGK
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCC
>Mature Secondary Structure
MRKIFSIFSAFILVNIIRVVSPFLLLPLLTHALTPSDYGILSLYDASVLVLVPLVLFNSP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCC
GLVGARFYKTSKGYIAEVNTAALFLTVLCCCILFFFLLCFSAAELFYNSFGGEFILLLPV
CCCHHHHEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
FVLARAINTYLAGLLQTQHKVRMFGVFSIGTLFLDLGLSLIFVSFFSMGYKGRLIASSFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
FLIFSFYGICLMRRDQLLSPFLMRERIVDIFEFGLPLIPHALGGVSLAVSSRYLIAYMLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHC
QGAAGVYAVGYQVGSIMLLVGTSINQAWSVSLFKWLGEGIEKSRSMIRKVMMGLFFLLLT
CCCCCHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLAMLWFCRDFVFWLLSNHHFEDAKLLYPYMLIGFFFQSLYFLIVNFDFYEEKVKSIGIT
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFFTSILSLLLCYVLVKQYGLIGAGYSYAISMFFYFAVVLIRVVGFNMKFRGVWLRNGK
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]