| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is wecB [H]
Identifier: 34499475
GI number: 34499475
Start: 4345871
End: 4347016
Strand: Reverse
Name: wecB [H]
Synonym: CV_4020
Alternate gene names: 34499475
Gene position: 4347016-4345871 (Counterclockwise)
Preceding gene: 34499476
Following gene: 34499474
Centisome position: 91.5
GC content: 43.8
Gene sequence:
>1146_bases ATGAGTACGCGTAAGAAAATTATGCTAGCTTTTGGCACGAGGCCAGAGGCGATTAAAATGGCTCCTCTTTATCATGCTTT GAAAAGCTGCGAAGAAAATTTCGAAACAGTCGTATGCCTTACCGCGCAACATCGGCAAATGCTAGATCAGGTTTTGTCAG TATTCAATATTGATGCGGATATTGACTTGAATTTGATGAAGCCAGGGCAAGATCTGTTTGATGTGACCTCATCTGTGCTT TTGCATATGCGCAGTGTTTTGAAGGAGCACAAGCCTGATATGCTGCTTGTGCATGGGGATACGACAACTTCTCTTGCTGC CGGTATGGCTGCGTTTTATCTTGGGATTCCTTTGGGACATGTCGAAGCGGGTTTGAGAACCTTTGATGTGCACGCTCCAT TTCCTGAGGAGTTTAACCGGCAGGTAGTTTCAAAGATATCTCAACTTCACTTCGCGCCTACTGAGCAAAGCAAGGATAAC TTGCTTAATGAGAATGTGCTGGAAAAGGATATTCTAGTTACAGGCAATACGGTAATCGATGCTCTTTTCTGGGTGCTCCA TAGAATTGATAGCGATCCAGTAAAATATAAAGCGTTATGTGATGTATTATCTGTTCACCTTCCCTTTAACTGGAAGGAGC AATGTTATATTCTCATCACAGGGCATAGGCGAGAAAACTTTGGCTCGGGCTTCCTGCAGATTTGTGAAGCTCTTAAAGAT TTGGCTAATAAATATCCAGATGTGAATTTCGTTTATCCTGTGCATTTGAACCCACAAGTTCAAGAGCCAGTGAATGCGAT TCTTAATAATCTGAATAATGTTCACCTGATTCCGCCGCTCGATTACGAGCCCTTTGTCATGCTTCTTAAGCACAGCTACA TTGTATTGACTGATAGTGGCGGCATTCAAGAGGAGGCTCCAAGCTTAGGGAAGCCAGTTCTCGTTATGCGAGATGTTACC GAAAGACCTGAAGCGGTCGCGGCTGGAACGGTGAAGTTGGTGGGGGCTGATCGGGCCAAGATCATTGAGCATGTTTCAAT TTTGCTGGATGATTCCAATCATTATGAAATGATGTCCAAAGCGCATAATCCTTATGGTGATGGCAGCGCATGTGAACGGA TTATTTCTGCTTTAAAGAGGGTGTAA
Upstream 100 bases:
>100_bases CAAGGATTTCGTAGTAGGTGTTTAGAAGGTGCGCTGAAATATAATAGACGTAATCTGGCATTGAAAATGCTTGATATTTT AAAGAAGGTGAATGTCTAAG
Downstream 100 bases:
>100_bases GTGATGATGAATAAAACGGTTTGCGTAGTCGGCTTGGGATATATTGGCTTGCCTACTGCAGCATTATTGGCGAGCAATGG TTATAAAGTTGTTGGTGTTG
Product: UDP-N-acetylglucosamine 2-epimerase
Products: NA
Alternate protein names: UDP-GlcNAc-2-epimerase [H]
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MSTRKKIMLAFGTRPEAIKMAPLYHALKSCEENFETVVCLTAQHRQMLDQVLSVFNIDADIDLNLMKPGQDLFDVTSSVL LHMRSVLKEHKPDMLLVHGDTTTSLAAGMAAFYLGIPLGHVEAGLRTFDVHAPFPEEFNRQVVSKISQLHFAPTEQSKDN LLNENVLEKDILVTGNTVIDALFWVLHRIDSDPVKYKALCDVLSVHLPFNWKEQCYILITGHRRENFGSGFLQICEALKD LANKYPDVNFVYPVHLNPQVQEPVNAILNNLNNVHLIPPLDYEPFVMLLKHSYIVLTDSGGIQEEAPSLGKPVLVMRDVT ERPEAVAAGTVKLVGADRAKIIEHVSILLDDSNHYEMMSKAHNPYGDGSACERIISALKRV
Sequences:
>Translated_381_residues MSTRKKIMLAFGTRPEAIKMAPLYHALKSCEENFETVVCLTAQHRQMLDQVLSVFNIDADIDLNLMKPGQDLFDVTSSVL LHMRSVLKEHKPDMLLVHGDTTTSLAAGMAAFYLGIPLGHVEAGLRTFDVHAPFPEEFNRQVVSKISQLHFAPTEQSKDN LLNENVLEKDILVTGNTVIDALFWVLHRIDSDPVKYKALCDVLSVHLPFNWKEQCYILITGHRRENFGSGFLQICEALKD LANKYPDVNFVYPVHLNPQVQEPVNAILNNLNNVHLIPPLDYEPFVMLLKHSYIVLTDSGGIQEEAPSLGKPVLVMRDVT ERPEAVAAGTVKLVGADRAKIIEHVSILLDDSNHYEMMSKAHNPYGDGSACERIISALKRV >Mature_380_residues STRKKIMLAFGTRPEAIKMAPLYHALKSCEENFETVVCLTAQHRQMLDQVLSVFNIDADIDLNLMKPGQDLFDVTSSVLL HMRSVLKEHKPDMLLVHGDTTTSLAAGMAAFYLGIPLGHVEAGLRTFDVHAPFPEEFNRQVVSKISQLHFAPTEQSKDNL LNENVLEKDILVTGNTVIDALFWVLHRIDSDPVKYKALCDVLSVHLPFNWKEQCYILITGHRRENFGSGFLQICEALKDL ANKYPDVNFVYPVHLNPQVQEPVNAILNNLNNVHLIPPLDYEPFVMLLKHSYIVLTDSGGIQEEAPSLGKPVLVMRDVTE RPEAVAAGTVKLVGADRAKIIEHVSILLDDSNHYEMMSKAHNPYGDGSACERIISALKRV
Specific function: Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) and thereby provides bacteria with UDP-N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues [H]
COG id: COG0381
COG function: function code M; UDP-N-acetylglucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-N-acetylglucosamine 2-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI48994967, Length=375, Percent_Identity=58.4, Blast_Score=437, Evalue=1e-124,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003331 [H]
Pfam domain/function: PF02350 Epimerase_2 [H]
EC number: =5.1.3.14 [H]
Molecular weight: Translated: 42668; Mature: 42537
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTRKKIMLAFGTRPEAIKMAPLYHALKSCEENFETVVCLTAQHRQMLDQVLSVFNIDAD CCCCCEEEEEECCCCCCEEHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHCCCCC IDLNLMKPGQDLFDVTSSVLLHMRSVLKEHKPDMLLVHGDTTTSLAAGMAAFYLGIPLGH CEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCHHH VEAGLRTFDVHAPFPEEFNRQVVSKISQLHFAPTEQSKDNLLNENVLEKDILVTGNTVID HHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEECHHHHH ALFWVLHRIDSDPVKYKALCDVLSVHLPFNWKEQCYILITGHRRENFGSGFLQICEALKD HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHH LANKYPDVNFVYPVHLNPQVQEPVNAILNNLNNVHLIPPLDYEPFVMLLKHSYIVLTDSG HHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHCCEEEEECCC GIQEEAPSLGKPVLVMRDVTERPEAVAAGTVKLVGADRAKIIEHVSILLDDSNHYEMMSK CCCCCCCCCCCCEEEEECCCCCCCHHHCCCEEEECCCHHHHHHHHHHEECCCCHHHHHHH AHNPYGDGSACERIISALKRV CCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure STRKKIMLAFGTRPEAIKMAPLYHALKSCEENFETVVCLTAQHRQMLDQVLSVFNIDAD CCCCEEEEEECCCCCCEEHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHCCCCC IDLNLMKPGQDLFDVTSSVLLHMRSVLKEHKPDMLLVHGDTTTSLAAGMAAFYLGIPLGH CEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCHHH VEAGLRTFDVHAPFPEEFNRQVVSKISQLHFAPTEQSKDNLLNENVLEKDILVTGNTVID HHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEECHHHHH ALFWVLHRIDSDPVKYKALCDVLSVHLPFNWKEQCYILITGHRRENFGSGFLQICEALKD HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHH LANKYPDVNFVYPVHLNPQVQEPVNAILNNLNNVHLIPPLDYEPFVMLLKHSYIVLTDSG HHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHCCEEEEECCC GIQEEAPSLGKPVLVMRDVTERPEAVAAGTVKLVGADRAKIIEHVSILLDDSNHYEMMSK CCCCCCCCCCCCEEEEECCCCCCCHHHCCCEEEECCCHHHHHHHHHHEECCCCHHHHHHH AHNPYGDGSACERIISALKRV CCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]