| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is wecC [H]
Identifier: 34499474
GI number: 34499474
Start: 4344629
End: 4345870
Strand: Reverse
Name: wecC [H]
Synonym: CV_4019
Alternate gene names: 34499474
Gene position: 4345870-4344629 (Counterclockwise)
Preceding gene: 34499475
Following gene: 34499473
Centisome position: 91.47
GC content: 47.83
Gene sequence:
>1242_bases GTGATGATGAATAAAACGGTTTGCGTAGTCGGCTTGGGATATATTGGCTTGCCTACTGCAGCATTATTGGCGAGCAATGG TTATAAAGTTGTTGGTGTTGATTTGAATCAGCATGCAGTTGATACGATTAATCAAGGCAATGTTCATATTGTTGAGCCTG ACCTGGATGGCTATGTGCGCTCTGCTGTTGCCACGGGAATGTTAAAGGCTTTTGTAACACCACAATCTGGCGATGTATAC ATGATCTGTGTGCCTACTCCTTTCCATGAGGGGGGGGGCATTCCTCAGCCGAATATTGACCATGTGTTGGCGGCTACCAG AAGCATTGCTCCATTTGTAAAAGAGGGTGATCTGGTCATCCTGGAGTCGACCTCTCCGGTTGGCACGACTGAGAAGATGG CTGAGGTTTTGGCTGAGTCGGGCGTCGATGTAGGTAAAATCCACATCGCCTACTGCCCTGAGCGTGTGTTGCCAGGTAAA ATTATGGTCGAACTGGTGGAGAATGACCGAATCGTTGGCGGTTTGACTCCCGAGGCGACGAGTGCGGTAGCTACTTTCTA CCGTAGCTTTGTCTCCGGCGAGGTATTGGAGACAAATTCGAAAACGGCTGAGATGTGCAAGCTGACCGAGAATAGCTTTC GTGATGTAAATATTGCTTTTGCCAATGAGCTCTCATTGATTTGTGCAAAAGAGAATATTGATGTGTGGAAATTGATTTCG CTGGCAAATCGTCACCCGCGCGTAAATATTTTGCAGCCAGGCGTTGGCGTGGGGGGGCATTGTATTGCGGTTGATCCTTG GTTTATCGTCGCTCGTGATCCTGAGAATGCGAGGCTCATTCGCTCGGCGCGTGAGGTTAACAACTCCAAGACGGATTGGG TTGTAGATAGAATAAAGGCTGAAATCGCGGATGCTCATGTCAAGCTCGGCCGCGCTCCTCGTGTCGCCTGCCTTGGTTTG GCATTCAAGCCTGATATTGATGATTTGCGCGAATCGCCGGCAGTGCAGGTGGTGGATGCTATCCTAAGAGCTGGCCATGA TGTAATTGTGGTTGAGCCTAATATTAGAGAGCATAGTGAATATGTGCTTATTGATTTGGATAGCGCTTTGGATGTTGCGG ACTTGATTGTGGTTTTGGTTCGACATAAGCAGTTTCTTGACCATGCGGTGAATCAGCGTTTACTAAGCTTGAATATCCAT GATTATTGTGGACTTAGAGCCGCTAACAAAATTTCGCGATAA
Upstream 100 bases:
>100_bases GGATGATTCCAATCATTATGAAATGATGTCCAAAGCGCATAATCCTTATGGTGATGGCAGCGCATGTGAACGGATTATTT CTGCTTTAAAGAGGGTGTAA
Downstream 100 bases:
>100_bases ACCGTAAGCAAATCAGGGAACAAGCTAGCTTCAACAATGCGTAATGCGTATCCAACCGACGTTCAAAGCGAATACGCAAC TTGTCGAACCTCGCTAGCCA
Product: UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase
Products: UDP-N-acetyl-D-mannosaminuronic-acid; NADH; Proton [C]
Alternate protein names: UDP-ManNAc 6-dehydrogenase [H]
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MMMNKTVCVVGLGYIGLPTAALLASNGYKVVGVDLNQHAVDTINQGNVHIVEPDLDGYVRSAVATGMLKAFVTPQSGDVY MICVPTPFHEGGGIPQPNIDHVLAATRSIAPFVKEGDLVILESTSPVGTTEKMAEVLAESGVDVGKIHIAYCPERVLPGK IMVELVENDRIVGGLTPEATSAVATFYRSFVSGEVLETNSKTAEMCKLTENSFRDVNIAFANELSLICAKENIDVWKLIS LANRHPRVNILQPGVGVGGHCIAVDPWFIVARDPENARLIRSAREVNNSKTDWVVDRIKAEIADAHVKLGRAPRVACLGL AFKPDIDDLRESPAVQVVDAILRAGHDVIVVEPNIREHSEYVLIDLDSALDVADLIVVLVRHKQFLDHAVNQRLLSLNIH DYCGLRAANKISR
Sequences:
>Translated_413_residues MMMNKTVCVVGLGYIGLPTAALLASNGYKVVGVDLNQHAVDTINQGNVHIVEPDLDGYVRSAVATGMLKAFVTPQSGDVY MICVPTPFHEGGGIPQPNIDHVLAATRSIAPFVKEGDLVILESTSPVGTTEKMAEVLAESGVDVGKIHIAYCPERVLPGK IMVELVENDRIVGGLTPEATSAVATFYRSFVSGEVLETNSKTAEMCKLTENSFRDVNIAFANELSLICAKENIDVWKLIS LANRHPRVNILQPGVGVGGHCIAVDPWFIVARDPENARLIRSAREVNNSKTDWVVDRIKAEIADAHVKLGRAPRVACLGL AFKPDIDDLRESPAVQVVDAILRAGHDVIVVEPNIREHSEYVLIDLDSALDVADLIVVLVRHKQFLDHAVNQRLLSLNIH DYCGLRAANKISR >Mature_413_residues MMMNKTVCVVGLGYIGLPTAALLASNGYKVVGVDLNQHAVDTINQGNVHIVEPDLDGYVRSAVATGMLKAFVTPQSGDVY MICVPTPFHEGGGIPQPNIDHVLAATRSIAPFVKEGDLVILESTSPVGTTEKMAEVLAESGVDVGKIHIAYCPERVLPGK IMVELVENDRIVGGLTPEATSAVATFYRSFVSGEVLETNSKTAEMCKLTENSFRDVNIAFANELSLICAKENIDVWKLIS LANRHPRVNILQPGVGVGGHCIAVDPWFIVARDPENARLIRSAREVNNSKTDWVVDRIKAEIADAHVKLGRAPRVACLGL AFKPDIDDLRESPAVQVVDAILRAGHDVIVVEPNIREHSEYVLIDLDSALDVADLIVVLVRHKQFLDHAVNQRLLSLNIH DYCGLRAANKISR
Specific function: Catalyzes the four-electron oxidation of UDP-N-acetyl-D- mannosamine (UDP-ManNAc), reducing NAD(+) and releasing UDP-N- acetylmannosaminuronic acid (UDP-ManNAcA) [H]
COG id: COG0677
COG function: function code M; UDP-N-acetyl-D-mannosaminuronate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI4507813, Length=388, Percent_Identity=26.0309278350515, Blast_Score=109, Evalue=6e-24, Organism=Homo sapiens, GI296040443, Length=379, Percent_Identity=26.1213720316623, Blast_Score=91, Evalue=3e-18, Organism=Homo sapiens, GI296040438, Length=282, Percent_Identity=25.531914893617, Blast_Score=82, Evalue=1e-15, Organism=Escherichia coli, GI48994968, Length=402, Percent_Identity=58.2089552238806, Blast_Score=464, Evalue=1e-132, Organism=Escherichia coli, GI1788340, Length=386, Percent_Identity=24.3523316062176, Blast_Score=86, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17560350, Length=402, Percent_Identity=27.8606965174129, Blast_Score=125, Evalue=4e-29, Organism=Drosophila melanogaster, GI17136908, Length=382, Percent_Identity=26.7015706806283, Blast_Score=108, Evalue=6e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR017476 - InterPro: IPR014027 - InterPro: IPR014026 - InterPro: IPR014028 - InterPro: IPR001732 [H]
Pfam domain/function: PF00984 UDPG_MGDP_dh; PF03720 UDPG_MGDP_dh_C; PF03721 UDPG_MGDP_dh_N [H]
EC number: 1.1.1.- [C]
Molecular weight: Translated: 44850; Mature: 44850
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMMNKTVCVVGLGYIGLPTAALLASNGYKVVGVDLNQHAVDTINQGNVHIVEPDLDGYVR CCCCCEEEEEECCHHHHCHHHHHHCCCCEEEEEECCCHHHHCCCCCCEEEECCCHHHHHH SAVATGMLKAFVTPQSGDVYMICVPTPFHEGGGIPQPNIDHVLAATRSIAPFVKEGDLVI HHHHHHHHHHEECCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCHHCCCCEEE LESTSPVGTTEKMAEVLAESGVDVGKIHIAYCPERVLPGKIMVELVENDRIVGGLTPEAT EECCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHEEEECCCCEEEECCCCHHH SAVATFYRSFVSGEVLETNSKTAEMCKLTENSFRDVNIAFANELSLICAKENIDVWKLIS HHHHHHHHHHHCCCEEECCCCHHHHHHHHCCCCCEEEEEEECCEEEEEECCCCCHHHHHH LANRHPRVNILQPGVGVGGHCIAVDPWFIVARDPENARLIRSAREVNNSKTDWVVDRIKA HHCCCCEEEEECCCCCCCCEEEEECCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHH EIADAHVKLGRAPRVACLGLAFKPDIDDLRESPAVQVVDAILRAGHDVIVVEPNIREHSE HHHHHHHHCCCCCCEEEEEEEECCCHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCCCCC YVLIDLDSALDVADLIVVLVRHKQFLDHAVNQRLLSLNIHDYCGLRAANKISR EEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHCCCHHHHCCC >Mature Secondary Structure MMMNKTVCVVGLGYIGLPTAALLASNGYKVVGVDLNQHAVDTINQGNVHIVEPDLDGYVR CCCCCEEEEEECCHHHHCHHHHHHCCCCEEEEEECCCHHHHCCCCCCEEEECCCHHHHHH SAVATGMLKAFVTPQSGDVYMICVPTPFHEGGGIPQPNIDHVLAATRSIAPFVKEGDLVI HHHHHHHHHHEECCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCHHCCCCEEE LESTSPVGTTEKMAEVLAESGVDVGKIHIAYCPERVLPGKIMVELVENDRIVGGLTPEAT EECCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHEEEECCCCEEEECCCCHHH SAVATFYRSFVSGEVLETNSKTAEMCKLTENSFRDVNIAFANELSLICAKENIDVWKLIS HHHHHHHHHHHCCCEEECCCCHHHHHHHHCCCCCEEEEEEECCEEEEEECCCCCHHHHHH LANRHPRVNILQPGVGVGGHCIAVDPWFIVARDPENARLIRSAREVNNSKTDWVVDRIKA HHCCCCEEEEECCCCCCCCEEEEECCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHH EIADAHVKLGRAPRVACLGLAFKPDIDDLRESPAVQVVDAILRAGHDVIVVEPNIREHSE HHHHHHHHCCCCCCEEEEEEEECCCHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCCCCC YVLIDLDSALDVADLIVVLVRHKQFLDHAVNQRLLSLNIHDYCGLRAANKISR EEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UDP-N-acetyl-D-mannosamine; NAD [C]
Specific reaction: UDP-N-acetyl-D-mannosamine + NAD = UDP-N-acetyl-D-mannosaminuronic-acid + NADH + Proton [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]