Click here to switch to the map view.

The map label for this gene is fliS [H]

Identifier: 34499330

GI number: 34499330

Start: 4177268

End: 4177705

Strand: Reverse

Name: fliS [H]

Synonym: CV_3875

Alternate gene names: 34499330

Gene position: 4177705-4177268 (Counterclockwise)

Preceding gene: 34499331

Following gene: 34499329

Centisome position: 87.93

GC content: 58.68

Gene sequence:

>438_bases
ATGCTGAATTCACGAATGCTCAAGCAGTTCAACCAGGCATACGCCAACGATGCCTTGAAGACCGCGATTTATGGCGCGAG
TCCGGTCGGCATCGTCGTGATGCTTTACGAGGGGGCCATCAAGGCCCTGCAGGCCGCGGATACCGCCATCGACAACAGCC
GTTTCGATGAAAAGGCCAGGATGATCACCAAGGCGGTGGATATTCTGGAGGGGCTGAGAATCGCTTTGGATCTGGAGCAG
GGCTCGGAAGCCGCCGTGAATCTGAACGATTTATACCTGTACATGAAACTGCGCTTGGCCAAGGCCAGCTTGAAGAACGA
CAAGGAGATCCTGGCCGAGGTTCGTTCATTGCTGGAAACCTTGCTGCCTGCCTGGCAGCAGGTCAACCGGGCCGGCGCGG
CGCAAGCCGCGGGCGTAGAGCCTCAAGCGGGGGCCTAG

Upstream 100 bases:

>100_bases
CCGGCTCGTCCAGTCTGTTCAATCTGATTTCCAGCAAGTAAAGTGGCGGACCGGATGGCATGGCGCTGTCCGGTTTCAGT
TCTAGAAATGATGGTGGGCC

Downstream 100 bases:

>100_bases
GACGGGATGACGTCGCAAACCGCGCGTTCGGCATTGGCCGAACTGATTGAGCAACTTGAGCCTCTGACCAGAGAGCTGCT
GGAAGCGGCGAATCTGCGGG

Product: flagellar protein FliS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MLNSRMLKQFNQAYANDALKTAIYGASPVGIVVMLYEGAIKALQAADTAIDNSRFDEKARMITKAVDILEGLRIALDLEQ
GSEAAVNLNDLYLYMKLRLAKASLKNDKEILAEVRSLLETLLPAWQQVNRAGAAQAAGVEPQAGA

Sequences:

>Translated_145_residues
MLNSRMLKQFNQAYANDALKTAIYGASPVGIVVMLYEGAIKALQAADTAIDNSRFDEKARMITKAVDILEGLRIALDLEQ
GSEAAVNLNDLYLYMKLRLAKASLKNDKEILAEVRSLLETLLPAWQQVNRAGAAQAAGVEPQAGA
>Mature_145_residues
MLNSRMLKQFNQAYANDALKTAIYGASPVGIVVMLYEGAIKALQAADTAIDNSRFDEKARMITKAVDILEGLRIALDLEQ
GSEAAVNLNDLYLYMKLRLAKASLKNDKEILAEVRSLLETLLPAWQQVNRAGAAQAAGVEPQAGA

Specific function: Not Known. [C]

COG id: COG1516

COG function: function code NUO; Flagellin-specific chaperone FliS

Gene ontology:

Cell location: Cytoplasm, cytosol (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliS family [H]

Homologues:

Organism=Escherichia coli, GI1788234, Length=117, Percent_Identity=36.7521367521368, Blast_Score=73, Evalue=7e-15,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003713 [H]

Pfam domain/function: PF02561 FliS [H]

EC number: NA

Molecular weight: Translated: 15722; Mature: 15722

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNSRMLKQFNQAYANDALKTAIYGASPVGIVVMLYEGAIKALQAADTAIDNSRFDEKAR
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
MITKAVDILEGLRIALDLEQGSEAAVNLNDLYLYMKLRLAKASLKNDKEILAEVRSLLET
HHHHHHHHHHHHHHEEECCCCCCCEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LLPAWQQVNRAGAAQAAGVEPQAGA
HHHHHHHHHHHCCHHHCCCCCCCCC
>Mature Secondary Structure
MLNSRMLKQFNQAYANDALKTAIYGASPVGIVVMLYEGAIKALQAADTAIDNSRFDEKAR
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
MITKAVDILEGLRIALDLEQGSEAAVNLNDLYLYMKLRLAKASLKNDKEILAEVRSLLET
HHHHHHHHHHHHHHEEECCCCCCCEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LLPAWQQVNRAGAAQAAGVEPQAGA
HHHHHHHHHHHCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1527488; 11677609 [H]