Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34499329

Identifier: 34499329

GI number: 34499329

Start: 4176929

End: 4177261

Strand: Reverse

Name: 34499329

Synonym: CV_3874

Alternate gene names: NA

Gene position: 4177261-4176929 (Counterclockwise)

Preceding gene: 34499330

Following gene: 34499328

Centisome position: 87.92

GC content: 60.96

Gene sequence:

>333_bases
ATGACGTCGCAAACCGCGCGTTCGGCATTGGCCGAACTGATTGAGCAACTTGAGCCTCTGACCAGAGAGCTGCTGGAAGC
GGCGAATCTGCGGGACCGTCCGCGCTTCTCCTCGCTGTATGGCCGCAGCGAAGCCCATGTGCAGCAGTTGCTGAAAACCT
TGGAGCAGGAGGGGCGCGACCAACTGAGCGACGAGCAGCGCGAGGCCTTGCACAGGGTACTCATCGTGCGTGAGGAAACC
CAGCGGCAGCTGGCCAATTGGGCCGGCCAGGTAAAGGATGAGCTGCGCACGCTGAGCAAGAGTTCCAAGCTTAACCGCCA
ATACAAGGGGTGA

Upstream 100 bases:

>100_bases
TTCATTGCTGGAAACCTTGCTGCCTGCCTGGCAGCAGGTCAACCGGGCCGGCGCGGCGCAAGCCGCGGGCGTAGAGCCTC
AAGCGGGGGCCTAGGACGGG

Downstream 100 bases:

>100_bases
ATCCAGGAGGGATGCCCGCCCCGGGTTTTGGCTTGGGTTGCGCGGTATTTCGCCATACACTTAAGTCAGTGCGGATCTCA
CCCGAGGGGAAATCTCCATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MTSQTARSALAELIEQLEPLTRELLEAANLRDRPRFSSLYGRSEAHVQQLLKTLEQEGRDQLSDEQREALHRVLIVREET
QRQLANWAGQVKDELRTLSKSSKLNRQYKG

Sequences:

>Translated_110_residues
MTSQTARSALAELIEQLEPLTRELLEAANLRDRPRFSSLYGRSEAHVQQLLKTLEQEGRDQLSDEQREALHRVLIVREET
QRQLANWAGQVKDELRTLSKSSKLNRQYKG
>Mature_109_residues
TSQTARSALAELIEQLEPLTRELLEAANLRDRPRFSSLYGRSEAHVQQLLKTLEQEGRDQLSDEQREALHRVLIVREETQ
RQLANWAGQVKDELRTLSKSSKLNRQYKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12758; Mature: 12626

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSQTARSALAELIEQLEPLTRELLEAANLRDRPRFSSLYGRSEAHVQQLLKTLEQEGRD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHH
QLSDEQREALHRVLIVREETQRQLANWAGQVKDELRTLSKSSKLNRQYKG
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TSQTARSALAELIEQLEPLTRELLEAANLRDRPRFSSLYGRSEAHVQQLLKTLEQEGRD
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHH
QLSDEQREALHRVLIVREETQRQLANWAGQVKDELRTLSKSSKLNRQYKG
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA