The gene/protein map for NC_005085 is currently unavailable.
Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is gspK [H]

Identifier: 34499262

GI number: 34499262

Start: 4106115

End: 4107104

Strand: Reverse

Name: gspK [H]

Synonym: CV_3807

Alternate gene names: 34499262

Gene position: 4107104-4106115 (Counterclockwise)

Preceding gene: 34499263

Following gene: 34499261

Centisome position: 86.45

GC content: 65.86

Gene sequence:

>990_bases
ATGAGGCGGCGCCAATCCGGCATGGCGGTGATCATGGCGCTGCTGATCGTCGCGCTGGCCACCACCGCCGCCAGCCTGGT
GTTGTGGCAGCAGGGGCTTTGGTGGCACCAGTTGGAGAACGACAAGAGCCGCGCCCAACTGCGCCTGGTGGCCGACGCCG
GCCTGGGCTGGGCGATGGAGATACTGCGCTTCAACAACGGCCCGGCCGGCAACGGCGTGGTGGCGCTGTCCCAGCTGTGG
GCGCAACCGTTGCCGCAGACCGAGGCGCAGGGCGTGAAGGTGAGCGGGGCGCTGACCGATTTGCAGGGCCGCTTCAACGT
CAATTCGCTGGTGCTCAACGGCCAGACCAACGTCAAGCAGCTGAAATTCTACAAGCGGCTGCTCAGTTCGCTGGGTCTGC
CGAGCAAGCTGTCCGAGCCCTTGCTCAAGGAGCTGCGCGGCGGCAAGGACGAGGACGACAAGCCGTCGGCGGATGGCGCG
GTCGCCGCGCCGCAGCCCAACCGCCCGCTGGCGCGGGTGGAGATGCTGCGCTGGCTGCCAGGCTACACGCCGGAGGTGAT
GGAGAAGCTGCTGCCGCACATCGCGGCCTTGCCGCCGTCGGTGACGCAGATCAACGTCAACACCGCGACCGGCGAGGTGC
TGAAGGCGATGGTTCTCGGCCTGGGCGACGGCAACATGATGGTGTTGATGAAGCAGCGGCAGACCAATTATTTCAAGGAC
GCCAACGATTTCAAGGCCCGGCTGCCGGGCGGCGGCGTGTCCTTGCAGGATGTGGACATCGGCGCCGCGTCCAGCTATTT
CCAGCTCGACAGCCGCGCCAGCTACGACAAGGCCAGGCTGTCGATGCGGGCGATGATCTACAGCAATCAGAACGTCGTCA
AACTGGTTTGGCGACAGGAAGGCAATGACGGCCGCAGCCCGCAGGCGCGGTCCGGTGGAGACAAACATGACGACGCTGCG
ACTTTATCTGCGTCCGGGCTGGCCCGATAG

Upstream 100 bases:

>100_bases
GGCCGATGGGCGACGCGGCCCAGGGACGGGTGCCGAGAGCGCTGGAGATGCGGGTGCAAATGCCGGGCAAGCGGCAGGCG
CGGCGGATATGGGTGTTGCC

Downstream 100 bases:

>100_bases
CGAGCCCGGCCTGCCCTGGGCCTTGCTGGGCGCCCGCGGCGAGCTCTCCGCCCAGGGCGACAGCGCGCCGGGCGGCTGGC
CCAAGGCCGAGCAGTGCGAG

Product: general secretory pathway protein K

Products: NA

Alternate protein names: Pectic enzymes secretion protein OUTK [H]

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MRRRQSGMAVIMALLIVALATTAASLVLWQQGLWWHQLENDKSRAQLRLVADAGLGWAMEILRFNNGPAGNGVVALSQLW
AQPLPQTEAQGVKVSGALTDLQGRFNVNSLVLNGQTNVKQLKFYKRLLSSLGLPSKLSEPLLKELRGGKDEDDKPSADGA
VAAPQPNRPLARVEMLRWLPGYTPEVMEKLLPHIAALPPSVTQINVNTATGEVLKAMVLGLGDGNMMVLMKQRQTNYFKD
ANDFKARLPGGGVSLQDVDIGAASSYFQLDSRASYDKARLSMRAMIYSNQNVVKLVWRQEGNDGRSPQARSGGDKHDDAA
TLSASGLAR

Sequences:

>Translated_329_residues
MRRRQSGMAVIMALLIVALATTAASLVLWQQGLWWHQLENDKSRAQLRLVADAGLGWAMEILRFNNGPAGNGVVALSQLW
AQPLPQTEAQGVKVSGALTDLQGRFNVNSLVLNGQTNVKQLKFYKRLLSSLGLPSKLSEPLLKELRGGKDEDDKPSADGA
VAAPQPNRPLARVEMLRWLPGYTPEVMEKLLPHIAALPPSVTQINVNTATGEVLKAMVLGLGDGNMMVLMKQRQTNYFKD
ANDFKARLPGGGVSLQDVDIGAASSYFQLDSRASYDKARLSMRAMIYSNQNVVKLVWRQEGNDGRSPQARSGGDKHDDAA
TLSASGLAR
>Mature_329_residues
MRRRQSGMAVIMALLIVALATTAASLVLWQQGLWWHQLENDKSRAQLRLVADAGLGWAMEILRFNNGPAGNGVVALSQLW
AQPLPQTEAQGVKVSGALTDLQGRFNVNSLVLNGQTNVKQLKFYKRLLSSLGLPSKLSEPLLKELRGGKDEDDKPSADGA
VAAPQPNRPLARVEMLRWLPGYTPEVMEKLLPHIAALPPSVTQINVNTATGEVLKAMVLGLGDGNMMVLMKQRQTNYFKD
ANDFKARLPGGGVSLQDVDIGAASSYFQLDSRASYDKARLSMRAMIYSNQNVVKLVWRQEGNDGRSPQARSGGDKHDDAA
TLSASGLAR

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of the multiple pectic enzymes [H]

COG id: COG3156

COG function: function code U; Type II secretory pathway, component PulK

Gene ontology:

Cell location: Cell inner membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP K family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005628 [H]

Pfam domain/function: PF03934 GspK [H]

EC number: NA

Molecular weight: Translated: 35784; Mature: 35784

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRQSGMAVIMALLIVALATTAASLVLWQQGLWWHQLENDKSRAQLRLVADAGLGWAME
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEEEECCCCHHHHH
ILRFNNGPAGNGVVALSQLWAQPLPQTEAQGVKVSGALTDLQGRFNVNSLVLNGQTNVKQ
HHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEECCHHHCCCCCCCEEEEECCCCCHHH
LKFYKRLLSSLGLPSKLSEPLLKELRGGKDEDDKPSADGAVAAPQPNRPLARVEMLRWLP
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHCC
GYTPEVMEKLLPHIAALPPSVTQINVNTATGEVLKAMVLGLGDGNMMVLMKQRQTNYFKD
CCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC
ANDFKARLPGGGVSLQDVDIGAASSYFQLDSRASYDKARLSMRAMIYSNQNVVKLVWRQE
CCHHHEECCCCCCEEEEECCCCCCCCEEECCCCCHHHHHHHHHHEEECCCCEEEEEEEEC
GNDGRSPQARSGGDKHDDAATLSASGLAR
CCCCCCCCCCCCCCCCCCHHHCCCCCCCC
>Mature Secondary Structure
MRRRQSGMAVIMALLIVALATTAASLVLWQQGLWWHQLENDKSRAQLRLVADAGLGWAME
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEEEECCCCHHHHH
ILRFNNGPAGNGVVALSQLWAQPLPQTEAQGVKVSGALTDLQGRFNVNSLVLNGQTNVKQ
HHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEECCHHHCCCCCCCEEEEECCCCCHHH
LKFYKRLLSSLGLPSKLSEPLLKELRGGKDEDDKPSADGAVAAPQPNRPLARVEMLRWLP
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHCC
GYTPEVMEKLLPHIAALPPSVTQINVNTATGEVLKAMVLGLGDGNMMVLMKQRQTNYFKD
CCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC
ANDFKARLPGGGVSLQDVDIGAASSYFQLDSRASYDKARLSMRAMIYSNQNVVKLVWRQE
CCHHHEECCCCCCEEEEECCCCCCCCEEECCCCCHHHHHHHHHHEEECCCCEEEEEEEEC
GNDGRSPQARSGGDKHDDAATLSASGLAR
CCCCCCCCCCCCCCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8326859 [H]