| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499261
Identifier: 34499261
GI number: 34499261
Start: 4104968
End: 4106137
Strand: Reverse
Name: 34499261
Synonym: CV_3806
Alternate gene names: NA
Gene position: 4106137-4104968 (Counterclockwise)
Preceding gene: 34499262
Following gene: 34499260
Centisome position: 86.43
GC content: 74.96
Gene sequence:
>1170_bases CTGCGTCCGGGCTGGCCCGATAGCGAGCCCGGCCTGCCCTGGGCCTTGCTGGGCGCCCGCGGCGAGCTCTCCGCCCAGGG CGACAGCGCGCCGGGCGGCTGGCCCAAGGCCGAGCAGTGCGAGCTGGTGCTGCCGGCCGGCCGCACCCTGTTCACCGACG TGAAGCTGCCGGACGCGGTCAAGCAGCCCACTCCGGCCGTGATCGGCTTCGCGCTGGAGGAGGGCTTGGCCAACGACCCG GGCGCCAATCTCTATGCATTGGGCGAGGCCTTGCCCGGCGGCCGGCGCGCGGTGGCGGCGACCGAGGCGGCCGGCCTGCG CCGCGCGGTGGCCATGCTCAAGAGCCTGGGCCGCCTGTGCGACCGCATCGTGCCGGAGGAGTGCCTGCTCTCGCCGCCGC CGGCCGGCGGTTGGAGCGTGACCCGCTTGTCCGACCGCTGGCTGGTGCGCGCGGCCGCGCCGTACGCGGCCAGCCTGCCG CGAGGCGGCGGGCAGCAGGAGCAGGCGCTGTTCGCCTCGCTGCTGTCGACGGCCATGCCGGCCCGGCTGCAGCTGTGCGG GGTGGACAGCGCCGAAGAGGTGCTTGCCCGCCTGCCGGGCTGGCAGGGCGAAACCGCGCGCGGCGAAGCCTGCGACTGGC GCAGCGCCCGCCGCCACGGCGGCTACGACTTCGCCCAGGGCGATCTGGCTGCCAACCGCTACTGGCGCGACTGGGCGCCG TCGCTGAAAAAGACCGGCTGGCTGCTGGGCGGCCTGCTGGCCGCGCAGATCCTGCTGACGCTGGGCCAGTCCGGCTGGTA CGCGTGGCAGAAGCACAGCCTGTCGCAGCAGATCCGCGCGGCGGCCACGCCGTGGATAGGCGGCCAGGCGCAGCCGGGCA GCAGCGCGCTGGCGATGACGCGGGCGGTGGACAGGCTCAGGCTCAGCCACGGCCTGCCCGCGCGCGACGACCTGGTGGAG CTGATGGGCGCGCTGGCCGCGGTCAGCGGCCGCGAACTGCAGGTGCGGACGCTGGAGTACGAGGCCGGCAGGCTGAAACT GCAGGTGGCCGAGGTGCCGGCGGAAAGCTTGGCCCGCTGGCGCAAGCAGCTGGCGGCGCGGCAGATCATGCTGGACGCGA CGAGCAGCCAGCCCGGCAGCAAGCAATTGGTGGTGGCGCGGGAGCCGTGA
Upstream 100 bases:
>100_bases CAGAACGTCGTCAAACTGGTTTGGCGACAGGAAGGCAATGACGGCCGCAGCCCGCAGGCGCGGTCCGGTGGAGACAAACA TGACGACGCTGCGACTTTAT
Downstream 100 bases:
>100_bases CGATGAAAGCCTACAAGCAACAGTTTCTCGAATACTGGAGCCAGCGCAGCCCGCGCGAGCGGCGGCTGCTGGCGGCGATG GGCGCGGTGCTGGGCGTCGC
Product: general secretion pathway protein L
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MRPGWPDSEPGLPWALLGARGELSAQGDSAPGGWPKAEQCELVLPAGRTLFTDVKLPDAVKQPTPAVIGFALEEGLANDP GANLYALGEALPGGRRAVAATEAAGLRRAVAMLKSLGRLCDRIVPEECLLSPPPAGGWSVTRLSDRWLVRAAAPYAASLP RGGGQQEQALFASLLSTAMPARLQLCGVDSAEEVLARLPGWQGETARGEACDWRSARRHGGYDFAQGDLAANRYWRDWAP SLKKTGWLLGGLLAAQILLTLGQSGWYAWQKHSLSQQIRAAATPWIGGQAQPGSSALAMTRAVDRLRLSHGLPARDDLVE LMGALAAVSGRELQVRTLEYEAGRLKLQVAEVPAESLARWRKQLAARQIMLDATSSQPGSKQLVVAREP
Sequences:
>Translated_389_residues MRPGWPDSEPGLPWALLGARGELSAQGDSAPGGWPKAEQCELVLPAGRTLFTDVKLPDAVKQPTPAVIGFALEEGLANDP GANLYALGEALPGGRRAVAATEAAGLRRAVAMLKSLGRLCDRIVPEECLLSPPPAGGWSVTRLSDRWLVRAAAPYAASLP RGGGQQEQALFASLLSTAMPARLQLCGVDSAEEVLARLPGWQGETARGEACDWRSARRHGGYDFAQGDLAANRYWRDWAP SLKKTGWLLGGLLAAQILLTLGQSGWYAWQKHSLSQQIRAAATPWIGGQAQPGSSALAMTRAVDRLRLSHGLPARDDLVE LMGALAAVSGRELQVRTLEYEAGRLKLQVAEVPAESLARWRKQLAARQIMLDATSSQPGSKQLVVAREP >Mature_389_residues MRPGWPDSEPGLPWALLGARGELSAQGDSAPGGWPKAEQCELVLPAGRTLFTDVKLPDAVKQPTPAVIGFALEEGLANDP GANLYALGEALPGGRRAVAATEAAGLRRAVAMLKSLGRLCDRIVPEECLLSPPPAGGWSVTRLSDRWLVRAAAPYAASLP RGGGQQEQALFASLLSTAMPARLQLCGVDSAEEVLARLPGWQGETARGEACDWRSARRHGGYDFAQGDLAANRYWRDWAP SLKKTGWLLGGLLAAQILLTLGQSGWYAWQKHSLSQQIRAAATPWIGGQAQPGSSALAMTRAVDRLRLSHGLPARDDLVE LMGALAAVSGRELQVRTLEYEAGRLKLQVAEVPAESLARWRKQLAARQIMLDATSSQPGSKQLVVAREP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41561; Mature: 41561
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPGWPDSEPGLPWALLGARGELSAQGDSAPGGWPKAEQCELVLPAGRTLFTDVKLPDAV CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCHHH KQPTPAVIGFALEEGLANDPGANLYALGEALPGGRRAVAATEAAGLRRAVAMLKSLGRLC CCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH DRIVPEECLLSPPPAGGWSVTRLSDRWLVRAAAPYAASLPRGGGQQEQALFASLLSTAMP HHHCCHHHCCCCCCCCCEEEEEECCCCEEEECCCHHHCCCCCCCHHHHHHHHHHHHHCCC ARLQLCGVDSAEEVLARLPGWQGETARGEACDWRSARRHGGYDFAQGDLAANRYWRDWAP CCEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCC SLKKTGWLLGGLLAAQILLTLGQSGWYAWQKHSLSQQIRAAATPWIGGQAQPGSSALAMT HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH RAVDRLRLSHGLPARDDLVELMGALAAVSGRELQVRTLEYEAGRLKLQVAEVPAESLARW HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEEEEECCCHHHHHHH RKQLAARQIMLDATSSQPGSKQLVVAREP HHHHHHHHHHEECCCCCCCCCEEEEEECC >Mature Secondary Structure MRPGWPDSEPGLPWALLGARGELSAQGDSAPGGWPKAEQCELVLPAGRTLFTDVKLPDAV CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCHHH KQPTPAVIGFALEEGLANDPGANLYALGEALPGGRRAVAATEAAGLRRAVAMLKSLGRLC CCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH DRIVPEECLLSPPPAGGWSVTRLSDRWLVRAAAPYAASLPRGGGQQEQALFASLLSTAMP HHHCCHHHCCCCCCCCCEEEEEECCCCEEEECCCHHHCCCCCCCHHHHHHHHHHHHHCCC ARLQLCGVDSAEEVLARLPGWQGETARGEACDWRSARRHGGYDFAQGDLAANRYWRDWAP CCEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCC SLKKTGWLLGGLLAAQILLTLGQSGWYAWQKHSLSQQIRAAATPWIGGQAQPGSSALAMT HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH RAVDRLRLSHGLPARDDLVELMGALAAVSGRELQVRTLEYEAGRLKLQVAEVPAESLARW HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEEEEECCCHHHHHHH RKQLAARQIMLDATSSQPGSKQLVVAREP HHHHHHHHHHEECCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA