| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499263
Identifier: 34499263
GI number: 34499263
Start: 4107101
End: 4107685
Strand: Reverse
Name: 34499263
Synonym: CV_3808
Alternate gene names: NA
Gene position: 4107685-4107101 (Counterclockwise)
Preceding gene: 34499264
Following gene: 34499262
Centisome position: 86.46
GC content: 70.6
Gene sequence:
>585_bases GTGAGCGCGCGGCGGCAGGGCGGCATGACGCTGCTGGAAATCCTGGTGGCGATGAGCCTGTTGGCCATCCTGTCGGTGAT GGGCTACAAGGCTTTCGGCTCGCTGCTGATCGCCCGCGAGCGGCTGATGCAGACCGGCGAGCAGTGGGTGGACGTGGCGC GGGCCTTCCGCCGGCTGGAAAGCGATCTGTCCGGCCAGCAACCGGCGGCGAACGCCGCCGAGCAGCAGCAGGGCCTGACG CTGGGCGCCAGCAGCCTGGTGCTGCAGCAGGACGGCAAGGGCCAGGCGCTGGTGCTGGAGGCGGTGTCCACGCGTTACCC GAGCGGACGGGAGCGCATCGTCTACCAGAGCGGAGAGGGCGGCGTCAGCTGGTCTGCGGGAGAGGCGGGCGCGGCCTCGC CCGTCGTCTACGCCTTGCTGGGACGCGACATGCGCGTCGATTGGCGGGTCTTGCTCAACGACGGCAGCTGGCAGCAGGCA TGGCCGATGGGCGACGCGGCCCAGGGACGGGTGCCGAGAGCGCTGGAGATGCGGGTGCAAATGCCGGGCAAGCGGCAGGC GCGGCGGATATGGGTGTTGCCATGA
Upstream 100 bases:
>100_bases ACTTCCGCAAGGTGGTGGTGCGCATCCTGGCGCCCGGCGCCGGCCATTACGTGCTGGCGGAAATCACCGGCTATCTCCGG CAGCAGGCGGGAGGCGGGGG
Downstream 100 bases:
>100_bases GGCGGCGCCAATCCGGCATGGCGGTGATCATGGCGCTGCTGATCGTCGCGCTGGCCACCACCGCCGCCAGCCTGGTGTTG TGGCAGCAGGGGCTTTGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MSARRQGGMTLLEILVAMSLLAILSVMGYKAFGSLLIARERLMQTGEQWVDVARAFRRLESDLSGQQPAANAAEQQQGLT LGASSLVLQQDGKGQALVLEAVSTRYPSGRERIVYQSGEGGVSWSAGEAGAASPVVYALLGRDMRVDWRVLLNDGSWQQA WPMGDAAQGRVPRALEMRVQMPGKRQARRIWVLP
Sequences:
>Translated_194_residues MSARRQGGMTLLEILVAMSLLAILSVMGYKAFGSLLIARERLMQTGEQWVDVARAFRRLESDLSGQQPAANAAEQQQGLT LGASSLVLQQDGKGQALVLEAVSTRYPSGRERIVYQSGEGGVSWSAGEAGAASPVVYALLGRDMRVDWRVLLNDGSWQQA WPMGDAAQGRVPRALEMRVQMPGKRQARRIWVLP >Mature_193_residues SARRQGGMTLLEILVAMSLLAILSVMGYKAFGSLLIARERLMQTGEQWVDVARAFRRLESDLSGQQPAANAAEQQQGLTL GASSLVLQQDGKGQALVLEAVSTRYPSGRERIVYQSGEGGVSWSAGEAGAASPVVYALLGRDMRVDWRVLLNDGSWQQAW PMGDAAQGRVPRALEMRVQMPGKRQARRIWVLP
Specific function: Unknown
COG id: COG4795
COG function: function code U; Type II secretory pathway, component PulJ
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21168; Mature: 21037
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARRQGGMTLLEILVAMSLLAILSVMGYKAFGSLLIARERLMQTGEQWVDVARAFRRLE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH SDLSGQQPAANAAEQQQGLTLGASSLVLQQDGKGQALVLEAVSTRYPSGRERIVYQSGEG HHCCCCCCCCCHHHHHCCCEECCHHEEEEECCCCCEEEEEEHHCCCCCCCCEEEEECCCC GVSWSAGEAGAASPVVYALLGRDMRVDWRVLLNDGSWQQAWPMGDAAQGRVPRALEMRVQ CCEECCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHEEC MPGKRQARRIWVLP CCCCCCCCEEECCC >Mature Secondary Structure SARRQGGMTLLEILVAMSLLAILSVMGYKAFGSLLIARERLMQTGEQWVDVARAFRRLE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH SDLSGQQPAANAAEQQQGLTLGASSLVLQQDGKGQALVLEAVSTRYPSGRERIVYQSGEG HHCCCCCCCCCHHHHHCCCEECCHHEEEEECCCCCEEEEEEHHCCCCCCCCEEEEECCCC GVSWSAGEAGAASPVVYALLGRDMRVDWRVLLNDGSWQQAWPMGDAAQGRVPRALEMRVQ CCEECCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHEEC MPGKRQARRIWVLP CCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA