| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is ppsA [H]
Identifier: 34499164
GI number: 34499164
Start: 4010431
End: 4012818
Strand: Reverse
Name: ppsA [H]
Synonym: CV_3709
Alternate gene names: 34499164
Gene position: 4012818-4010431 (Counterclockwise)
Preceding gene: 34499166
Following gene: 34499159
Centisome position: 84.46
GC content: 64.28
Gene sequence:
>2388_bases ATGGCAGACAACTACGTCATCTGGTTCGAGAAGCTGCGCATGACCGACGTGGAAGAGGTAGGCGGCAAGAACGCCTCCCT CGGCGAAATGATCAGTCAGCTGGCGGGCTCCGGCGTTCGTGTTCCCGGCGGCTTTGCCACCACTGCTCAGGCATACCGGG ATTTCCTGCAGCACAATGGCCTGGCCGACAAGATCAACGCCGCGCTGGCCAAACTCGATATCGACGACGTCAGCGAACTG GCCCGGGTGGGCAAGGAAATCCGCCAGTGGATCATCGACACCCCGTTCCCGGCCAAGCTGGATGCCGACATCAAGGAAGC TTGGGACAAGATGGTGGCCGACGCCGGCGGCGCCGACATCTCCGTGGCGGTCCGCTCCTCCGCCACCGCTGAAGACCTCC CCGACGCCTCGTTCGCAGGCCAGCAAGAAACCTTCCTGAACATCCGCGGCCTCGACAACGTCAAGGACGCGATGAAGCAC GTGTTCGCCTCCCTGTACAACGACCGCGCCATCTCCTACCGCGTGCACAAGGGCTTTGCCCACGACGTGGTGGCCCTGTC CGCAGGCGTGCAGCGCATGGTGCGTTCCGACATGGGCGCGGCCGGCGTGATGTTCACCATCGACACCGAATCCGGCTTCG AGGACGTGGTGTTCATCACCGCTTCCTACGGCCTGGGCGAGACCGTGGTGCAGGGCGCCGTGAACCCGGACGAGTTCTAC GTGCACAAGCCGACGCTGAAGGCCGGCCGCCCGGCGGTGCTGCGCAAGACCATGGGCTCCAAGCTGATCAAGATGGAGTT CACCGACGCGTCGCAAGCCGGCCGCTCGGTCAAGACCGTGGATGTGGAGCCGGCGCTGCGCAAAGCGTTCTCGATCAGCG ACGCCGAAGTGGCTGAACTGGCCCAGTACGCGCTGATCATCGAAAAACACTACGGCCGCCCGATGGACATCGAGTGGGGC CGCGACGGCGTGGACGGCAAGCTGTACATTCTGCAGGCGCGTCCGGAAACCGTTAAGTCGCAGGAAGACCGCAAGGACAC CCTGCGCCGCTACCGCCTGAACAGCAAGTCCGAGATCCTGTGCGAAGGCCGCGCCATCGGCCAGAAGATCGGCCAGGGCG TGGTGCGCACCATCAAGGACGCGTCCGAGATGGACCGCGTCAAGCCGGGCGATGTGCTGGTCACCGACATGACCGACCCG GATTGGGAACCGGTGATGAAGCGCGCCGCCGCCATCGTGACCAACCGCGGCGGCCGCACCTGCCACGCGGCGATCATCGC GCGCGAGCTGGGCATCCCGGCCGTGGTCGGCTGCGGCGACGCCACCGACGTGCTGAAGGAAGGCATGCAGGTCACCGTGT CCTGCGCCGAAGGCGACACCGGCAACATCTACGACGGCCTGCTGGACGTGGAAGTGATCGACCTGGAACTGGACAAGATG CCCAAGGCCCCGGTCAAGATCATGATGAACGTCGGCAATCCGGAACTGGCTTTCGATTTCGCCCAACTGCCTAACGAAGG CGTGGGCCTGGCGCGGATGGAATTCGTCATCAACCGCCAGATCGGCATCCACCCGAAAGCGCTGCTGGAGTTCGACAAGC TGAGCCCGGAGCTGAAGGAAACCATTTCCGACCGCATCGCCGGCTACGCCAGCCCGGTGGACTTCTACGTCGACAAGATC GCCGAGGGCGTGTCCACGCTGGCCGCGGCCTTCTACCCGAAGAAGGTCATCGTGCGCATGTCGGACTTCAAGTCCAACGA GTACGCCAACCTGATCGGCGGCCAGCTGTACGAGCCGCACGAAGAGAACCCGATGATCGGCTTCCGCGGCGCCGCCCGCT ACGTGGCCGAGTCGTTCCGCGACTGTTTCGAGCTGGAATGCCGCGCGATCAAGAAGGTGCGCGACGTGATGGGCCTGACC AACGTGGAAGTGATGATCCCGTTCGTCCGCACCCTGGCCGAAGCCGAGAAGGTGGTCGAGATCCTGGCTGAAAACGGCCT GAAGCGCGGCGAAAACGGCTTGCGCCTGATCATGATGTGCGAGCTGCCGACCAACGCGGTGCTGGCTGAGAAGTTCCTGC AGCACTTCGACGGCTTCTCCATCGGCTCCAACGACATGACCCAGCTGACGCTGGGCGTGGACCGCGATTCCGGCGGCCCG ATCGCCTCCACCTTCGACGAGCGCAACGAGGCGGTCAAGGCCATGCTGCACATGTCCATCCAAGCTTGCCGCAAGCTGGG CAAGTACGTGGGCATCTGCGGCCAGGGCCCGTCCGACCACCCGGACTTCGCCAAGTGGCTGGTGGAGGAGGGCATCGAGA CCGTGTCGCTGAACCCGGACACCGTGGTGGAAACCTGGCTTTACCTGGCCAAGGAGCTGAACAGCTGA
Upstream 100 bases:
>100_bases GCAAAAAGTCTTGTGCAGCGCAAAAGATGCTACGCAATTCGCACGTAATTCGGCTAGAATGCGGCCCTATCGTCCCAATC CCAACACAGGAAGTGAAGTG
Downstream 100 bases:
>100_bases GGCTGACGGCAGCCCATCGGTGAATGAGAAACCGCCCGGAAACGGGCGGTTTTCGCTTGTTTGCGGCAGGCTGATGATCA GCGGCCGGGGTCGCCGTTCC
Product: phosphoenolpyruvate synthase
Products: NA
Alternate protein names: PEP synthase; Pyruvate, water dikinase [H]
Number of amino acids: Translated: 795; Mature: 794
Protein sequence:
>795_residues MADNYVIWFEKLRMTDVEEVGGKNASLGEMISQLAGSGVRVPGGFATTAQAYRDFLQHNGLADKINAALAKLDIDDVSEL ARVGKEIRQWIIDTPFPAKLDADIKEAWDKMVADAGGADISVAVRSSATAEDLPDASFAGQQETFLNIRGLDNVKDAMKH VFASLYNDRAISYRVHKGFAHDVVALSAGVQRMVRSDMGAAGVMFTIDTESGFEDVVFITASYGLGETVVQGAVNPDEFY VHKPTLKAGRPAVLRKTMGSKLIKMEFTDASQAGRSVKTVDVEPALRKAFSISDAEVAELAQYALIIEKHYGRPMDIEWG RDGVDGKLYILQARPETVKSQEDRKDTLRRYRLNSKSEILCEGRAIGQKIGQGVVRTIKDASEMDRVKPGDVLVTDMTDP DWEPVMKRAAAIVTNRGGRTCHAAIIARELGIPAVVGCGDATDVLKEGMQVTVSCAEGDTGNIYDGLLDVEVIDLELDKM PKAPVKIMMNVGNPELAFDFAQLPNEGVGLARMEFVINRQIGIHPKALLEFDKLSPELKETISDRIAGYASPVDFYVDKI AEGVSTLAAAFYPKKVIVRMSDFKSNEYANLIGGQLYEPHEENPMIGFRGAARYVAESFRDCFELECRAIKKVRDVMGLT NVEVMIPFVRTLAEAEKVVEILAENGLKRGENGLRLIMMCELPTNAVLAEKFLQHFDGFSIGSNDMTQLTLGVDRDSGGP IASTFDERNEAVKAMLHMSIQACRKLGKYVGICGQGPSDHPDFAKWLVEEGIETVSLNPDTVVETWLYLAKELNS
Sequences:
>Translated_795_residues MADNYVIWFEKLRMTDVEEVGGKNASLGEMISQLAGSGVRVPGGFATTAQAYRDFLQHNGLADKINAALAKLDIDDVSEL ARVGKEIRQWIIDTPFPAKLDADIKEAWDKMVADAGGADISVAVRSSATAEDLPDASFAGQQETFLNIRGLDNVKDAMKH VFASLYNDRAISYRVHKGFAHDVVALSAGVQRMVRSDMGAAGVMFTIDTESGFEDVVFITASYGLGETVVQGAVNPDEFY VHKPTLKAGRPAVLRKTMGSKLIKMEFTDASQAGRSVKTVDVEPALRKAFSISDAEVAELAQYALIIEKHYGRPMDIEWG RDGVDGKLYILQARPETVKSQEDRKDTLRRYRLNSKSEILCEGRAIGQKIGQGVVRTIKDASEMDRVKPGDVLVTDMTDP DWEPVMKRAAAIVTNRGGRTCHAAIIARELGIPAVVGCGDATDVLKEGMQVTVSCAEGDTGNIYDGLLDVEVIDLELDKM PKAPVKIMMNVGNPELAFDFAQLPNEGVGLARMEFVINRQIGIHPKALLEFDKLSPELKETISDRIAGYASPVDFYVDKI AEGVSTLAAAFYPKKVIVRMSDFKSNEYANLIGGQLYEPHEENPMIGFRGAARYVAESFRDCFELECRAIKKVRDVMGLT NVEVMIPFVRTLAEAEKVVEILAENGLKRGENGLRLIMMCELPTNAVLAEKFLQHFDGFSIGSNDMTQLTLGVDRDSGGP IASTFDERNEAVKAMLHMSIQACRKLGKYVGICGQGPSDHPDFAKWLVEEGIETVSLNPDTVVETWLYLAKELNS >Mature_794_residues ADNYVIWFEKLRMTDVEEVGGKNASLGEMISQLAGSGVRVPGGFATTAQAYRDFLQHNGLADKINAALAKLDIDDVSELA RVGKEIRQWIIDTPFPAKLDADIKEAWDKMVADAGGADISVAVRSSATAEDLPDASFAGQQETFLNIRGLDNVKDAMKHV FASLYNDRAISYRVHKGFAHDVVALSAGVQRMVRSDMGAAGVMFTIDTESGFEDVVFITASYGLGETVVQGAVNPDEFYV HKPTLKAGRPAVLRKTMGSKLIKMEFTDASQAGRSVKTVDVEPALRKAFSISDAEVAELAQYALIIEKHYGRPMDIEWGR DGVDGKLYILQARPETVKSQEDRKDTLRRYRLNSKSEILCEGRAIGQKIGQGVVRTIKDASEMDRVKPGDVLVTDMTDPD WEPVMKRAAAIVTNRGGRTCHAAIIARELGIPAVVGCGDATDVLKEGMQVTVSCAEGDTGNIYDGLLDVEVIDLELDKMP KAPVKIMMNVGNPELAFDFAQLPNEGVGLARMEFVINRQIGIHPKALLEFDKLSPELKETISDRIAGYASPVDFYVDKIA EGVSTLAAAFYPKKVIVRMSDFKSNEYANLIGGQLYEPHEENPMIGFRGAARYVAESFRDCFELECRAIKKVRDVMGLTN VEVMIPFVRTLAEAEKVVEILAENGLKRGENGLRLIMMCELPTNAVLAEKFLQHFDGFSIGSNDMTQLTLGVDRDSGGPI ASTFDERNEAVKAMLHMSIQACRKLGKYVGICGQGPSDHPDFAKWLVEEGIETVSLNPDTVVETWLYLAKELNS
Specific function: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1787994, Length=786, Percent_Identity=66.6666666666667, Blast_Score=1110, Evalue=0.0, Organism=Escherichia coli, GI1788756, Length=433, Percent_Identity=26.0969976905312, Blast_Score=100, Evalue=5e-22, Organism=Escherichia coli, GI1788726, Length=192, Percent_Identity=31.7708333333333, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI48994992, Length=373, Percent_Identity=24.9329758713137, Blast_Score=85, Evalue=2e-17, Organism=Escherichia coli, GI1789193, Length=395, Percent_Identity=25.0632911392405, Blast_Score=81, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17564524, Length=316, Percent_Identity=27.2151898734177, Blast_Score=79, Evalue=9e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR006319 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR015813 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]
EC number: =2.7.9.2 [H]
Molecular weight: Translated: 87177; Mature: 87045
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS00370 PEP_ENZYMES_PHOS_SITE ; PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADNYVIWFEKLRMTDVEEVGGKNASLGEMISQLAGSGVRVPGGFATTAQAYRDFLQHNG CCCCEEEEEEHHHHCCHHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC LADKINAALAKLDIDDVSELARVGKEIRQWIIDTPFPAKLDADIKEAWDKMVADAGGADI CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCE SVAVRSSATAEDLPDASFAGQQETFLNIRGLDNVKDAMKHVFASLYNDRAISYRVHKGFA EEEEECCCCHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCH HDVVALSAGVQRMVRSDMGAAGVMFTIDTESGFEDVVFITASYGLGETVVQGAVNPDEFY HHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEECCCCCHHHHHCCCCCCCEE VHKPTLKAGRPAVLRKTMGSKLIKMEFTDASQAGRSVKTVDVEPALRKAFSISDAEVAEL EECCCCCCCCHHHHHHHHCCCEEEEEECCHHHCCCCEEEEECCHHHHHHHCCCHHHHHHH AQYALIIEKHYGRPMDIEWGRDGVDGKLYILQARPETVKSQEDRKDTLRRYRLNSKSEIL HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHCCHHHHHHHHHHHHCCCCCCEE CEGRAIGQKIGQGVVRTIKDASEMDRVKPGDVLVTDMTDPDWEPVMKRAAAIVTNRGGRT ECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCH CHAAIIARELGIPAVVGCGDATDVLKEGMQVTVSCAEGDTGNIYDGLLDVEVIDLELDKM HHHHHHHHHCCCCEEEECCCHHHHHHCCCEEEEEECCCCCCCHHCCEEEEEEEEEECCCC PKAPVKIMMNVGNPELAFDFAQLPNEGVGLARMEFVINRQIGIHPKALLEFDKLSPELKE CCCCEEEEEECCCCHHEEEHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHH TISDRIAGYASPVDFYVDKIAEGVSTLAAAFYPKKVIVRMSDFKSNEYANLIGGQLYEPH HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCCHHHHHCCCCCCCC EENPMIGFRGAARYVAESFRDCFELECRAIKKVRDVMGLTNVEVMIPFVRTLAEAEKVVE CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH ILAENGLKRGENGLRLIMMCELPTNAVLAEKFLQHFDGFSIGSNDMTQLTLGVDRDSGGP HHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCC IASTFDERNEAVKAMLHMSIQACRKLGKYVGICGQGPSDHPDFAKWLVEEGIETVSLNPD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHCCCCEEECCCH TVVETWLYLAKELNS HHHHHHHHHHHHHCC >Mature Secondary Structure ADNYVIWFEKLRMTDVEEVGGKNASLGEMISQLAGSGVRVPGGFATTAQAYRDFLQHNG CCCEEEEEEHHHHCCHHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC LADKINAALAKLDIDDVSELARVGKEIRQWIIDTPFPAKLDADIKEAWDKMVADAGGADI CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCE SVAVRSSATAEDLPDASFAGQQETFLNIRGLDNVKDAMKHVFASLYNDRAISYRVHKGFA EEEEECCCCHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCH HDVVALSAGVQRMVRSDMGAAGVMFTIDTESGFEDVVFITASYGLGETVVQGAVNPDEFY HHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEECCCCCHHHHHCCCCCCCEE VHKPTLKAGRPAVLRKTMGSKLIKMEFTDASQAGRSVKTVDVEPALRKAFSISDAEVAEL EECCCCCCCCHHHHHHHHCCCEEEEEECCHHHCCCCEEEEECCHHHHHHHCCCHHHHHHH AQYALIIEKHYGRPMDIEWGRDGVDGKLYILQARPETVKSQEDRKDTLRRYRLNSKSEIL HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHCCHHHHHHHHHHHHCCCCCCEE CEGRAIGQKIGQGVVRTIKDASEMDRVKPGDVLVTDMTDPDWEPVMKRAAAIVTNRGGRT ECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCH CHAAIIARELGIPAVVGCGDATDVLKEGMQVTVSCAEGDTGNIYDGLLDVEVIDLELDKM HHHHHHHHHCCCCEEEECCCHHHHHHCCCEEEEEECCCCCCCHHCCEEEEEEEEEECCCC PKAPVKIMMNVGNPELAFDFAQLPNEGVGLARMEFVINRQIGIHPKALLEFDKLSPELKE CCCCEEEEEECCCCHHEEEHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHH TISDRIAGYASPVDFYVDKIAEGVSTLAAAFYPKKVIVRMSDFKSNEYANLIGGQLYEPH HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCCHHHHHCCCCCCCC EENPMIGFRGAARYVAESFRDCFELECRAIKKVRDVMGLTNVEVMIPFVRTLAEAEKVVE CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH ILAENGLKRGENGLRLIMMCELPTNAVLAEKFLQHFDGFSIGSNDMTQLTLGVDRDSGGP HHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCC IASTFDERNEAVKAMLHMSIQACRKLGKYVGICGQGPSDHPDFAKWLVEEGIETVSLNPD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHCCCCEEECCCH TVVETWLYLAKELNS HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]