| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499159
Identifier: 34499159
GI number: 34499159
Start: 4004640
End: 4006004
Strand: Reverse
Name: 34499159
Synonym: CV_3704
Alternate gene names: NA
Gene position: 4006004-4004640 (Counterclockwise)
Preceding gene: 34499164
Following gene: 34499158
Centisome position: 84.32
GC content: 72.31
Gene sequence:
>1365_bases GTGCCTGTCGCCCCGCGGGGTGCGGTCTTCGCGCGGCTGCCATTGCGGCTTGTCGTCGCGGCGGAAGCGGCTGTCGCGCT CGCCGTCCTCGCGCTTGGCGAACAGCTTGCGCGGCGCGTCGCCGTCCTGGCGCGGGGCGCGGTCTTCGCGCGGCTGCCAT TGCGGCTTGTCGTCGCGGCGGAAGCGGTTGTCGCGCTCGCCGTCCTCGCGCTTGGCGAAGATCTTGCGCGGGCCGTCGCC ATCGTGGCGCGGCGCGCGGTCTTCGCGCGGCTGCCATTGCGGCTTGTCGTCGCGGCGGAAGCGGTTGTCGCGCTCGTCGT CCTCGCGCTTGGCGAAGATCTTGCGCGGGCCGTCGCCATCGTGGTGGGGCGCGTGGTCTTCGCGCGGCTGCCATTGCGGC TTGTCGTCGCGGCGGAAGCGGTTGTCGCGCTCGCCGTCCTCGCGCTTGGCGAAGATCTTGCGCGGGCCGTCGCCGTCGTG GCGGGACGCGCGGTCTTCGCGCGGCTGCCATTGCGGCTTGTCGTCACGGCGGAAATGATGGTCGCGCTCGCCGCCTTCGC GCTTGGCGAAGTCTTTGCGCGGGCCGTTGTCGCCGTAGGGCGCGCGATCCTCGCGAGCTTGCCACTGCGGCTTGTCGTCG CGGGGGAAGCCGCCTTGGGCGCGCGGCTTGAATTCGCGCGGCGGCGCGTCTTCGGTGTGCAGCGGCTTGCGGCCGGACGG GCCGCGGTCGCGGCTGTAGCGCTTGTCCTGCGGCGCGCCGTCGCGGCGGAAATCGGCGGCGCGTTCCACGCCCTCCGGCA GCGGCTTGCGATTGGATGGACCGCGGTCGCGGTCGTAGCGGCGGTCGTCCTGGCGCGGCTGCCAGGCCGACTTGTCGCCG TCGCGGTGGAAGCGTTGCTGCTGGCCTTGGCCGCGGTCGTCGGAGCGCTTGTCGAAGCGGCGGTCATCCTGGCGCGGCTG CCAGGCCGGCTTGTCGCCGTCGCGTTGGAAGCGTTGCTGCTGGCCTTGGCCGCGGTCGTCGGAGCGCTTGTCGAAGCGGC GGTCGTCCTGGCGCGGCTGCCAGGCCGACTTGTCGCCGTCGCGGTGGAAGCGTTTCTGCTGGCCATCGCCGCGGTCGTCG GAGCGCTTGTCGAAACGGCGTTGTTCCTGGCCGGGCTTCCAGTCCGGCTTGCCCGGGCCGGGACGCTGGCCGGAGTACGG CGCGCGCGGTTTGCCGTCCTGCGGCTGCCGATCGGGGGCGCTCGGGTTTCCGCCTGCCGGCGAGTTGGCCGCGCGTTCGC GGCTGGTTTGATCGCGGCGCTGGCTGGCGCGTTGGCGGGAGCGGAAACTGGACATGAAACGACCTCGAATGGGCAAACTA AATAA
Upstream 100 bases:
>100_bases GCGCGTGGCTGCTGTCGTGCGGGCGCTGCTCGAAGGCGCGGCGCGGCTGGTCGACCCGGTGGGTGTCGCCGAACGGCTGC AGGCCGCGCGAGCGATGCTC
Downstream 100 bases:
>100_bases GTAATCCTTTAATTTTAACGTATTTGGCCGCCGCCTGCTTGGTGGCGCTGCGGCTTTCCGCTACCATAACCGGTTCGATT CGATATTGGATTGCGATGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 453
Protein sequence:
>454_residues MPVAPRGAVFARLPLRLVVAAEAAVALAVLALGEQLARRVAVLARGAVFARLPLRLVVAAEAVVALAVLALGEDLARAVA IVARRAVFARLPLRLVVAAEAVVALVVLALGEDLARAVAIVVGRVVFARLPLRLVVAAEAVVALAVLALGEDLARAVAVV AGRAVFARLPLRLVVTAEMMVALAAFALGEVFARAVVAVGRAILASLPLRLVVAGEAALGARLEFARRRVFGVQRLAAGR AAVAAVALVLRRAVAAEIGGAFHALRQRLAIGWTAVAVVAAVVLARLPGRLVAVAVEALLLALAAVVGALVEAAVILARL PGRLVAVALEALLLALAAVVGALVEAAVVLARLPGRLVAVAVEAFLLAIAAVVGALVETALFLAGLPVRLARAGTLAGVR RARFAVLRLPIGGARVSACRRVGRAFAAGLIAALAGALAGAETGHETTSNGQTK
Sequences:
>Translated_454_residues MPVAPRGAVFARLPLRLVVAAEAAVALAVLALGEQLARRVAVLARGAVFARLPLRLVVAAEAVVALAVLALGEDLARAVA IVARRAVFARLPLRLVVAAEAVVALVVLALGEDLARAVAIVVGRVVFARLPLRLVVAAEAVVALAVLALGEDLARAVAVV AGRAVFARLPLRLVVTAEMMVALAAFALGEVFARAVVAVGRAILASLPLRLVVAGEAALGARLEFARRRVFGVQRLAAGR AAVAAVALVLRRAVAAEIGGAFHALRQRLAIGWTAVAVVAAVVLARLPGRLVAVAVEALLLALAAVVGALVEAAVILARL PGRLVAVALEALLLALAAVVGALVEAAVVLARLPGRLVAVAVEAFLLAIAAVVGALVETALFLAGLPVRLARAGTLAGVR RARFAVLRLPIGGARVSACRRVGRAFAAGLIAALAGALAGAETGHETTSNGQTK >Mature_453_residues PVAPRGAVFARLPLRLVVAAEAAVALAVLALGEQLARRVAVLARGAVFARLPLRLVVAAEAVVALAVLALGEDLARAVAI VARRAVFARLPLRLVVAAEAVVALVVLALGEDLARAVAIVVGRVVFARLPLRLVVAAEAVVALAVLALGEDLARAVAVVA GRAVFARLPLRLVVTAEMMVALAAFALGEVFARAVVAVGRAILASLPLRLVVAGEAALGARLEFARRRVFGVQRLAAGRA AVAAVALVLRRAVAAEIGGAFHALRQRLAIGWTAVAVVAAVVLARLPGRLVAVAVEALLLALAAVVGALVEAAVILARLP GRLVAVALEALLLALAAVVGALVEAAVVLARLPGRLVAVAVEAFLLAIAAVVGALVETALFLAGLPVRLARAGTLAGVRR ARFAVLRLPIGGARVSACRRVGRAFAAGLIAALAGALAGAETGHETTSNGQTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45859; Mature: 45728
Theoretical pI: Translated: 12.47; Mature: 12.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVAPRGAVFARLPLRLVVAAEAAVALAVLALGEQLARRVAVLARGAVFARLPLRLVVAA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAVVALAVLALGEDLARAVAIVARRAVFARLPLRLVVAAEAVVALVVLALGEDLARAVAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVGRVVFARLPLRLVVAAEAVVALAVLALGEDLARAVAVVAGRAVFARLPLRLVVTAEMM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH VALAAFALGEVFARAVVAVGRAILASLPLRLVVAGEAALGARLEFARRRVFGVQRLAAGR HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHH AAVAAVALVLRRAVAAEIGGAFHALRQRLAIGWTAVAVVAAVVLARLPGRLVAVAVEALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LALAAVVGALVEAAVILARLPGRLVAVALEALLLALAAVVGALVEAAVVLARLPGRLVAV HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH AVEAFLLAIAAVVGALVETALFLAGLPVRLARAGTLAGVRRARFAVLRLPIGGARVSACR HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH RVGRAFAAGLIAALAGALAGAETGHETTSNGQTK HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure PVAPRGAVFARLPLRLVVAAEAAVALAVLALGEQLARRVAVLARGAVFARLPLRLVVAA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAVVALAVLALGEDLARAVAIVARRAVFARLPLRLVVAAEAVVALVVLALGEDLARAVAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVGRVVFARLPLRLVVAAEAVVALAVLALGEDLARAVAVVAGRAVFARLPLRLVVTAEMM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH VALAAFALGEVFARAVVAVGRAILASLPLRLVVAGEAALGARLEFARRRVFGVQRLAAGR HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHH AAVAAVALVLRRAVAAEIGGAFHALRQRLAIGWTAVAVVAAVVLARLPGRLVAVAVEALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LALAAVVGALVEAAVILARLPGRLVAVALEALLLALAAVVGALVEAAVVLARLPGRLVAV HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH AVEAFLLAIAAVVGALVETALFLAGLPVRLARAGTLAGVRRARFAVLRLPIGGARVSACR HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH RVGRAFAAGLIAALAGALAGAETGHETTSNGQTK HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA