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The map label for this gene is yciH [H]

Identifier: 34499166

GI number: 34499166

Start: 4013940

End: 4014296

Strand: Reverse

Name: yciH [H]

Synonym: CV_3711

Alternate gene names: 34499166

Gene position: 4014296-4013940 (Counterclockwise)

Preceding gene: 34499167

Following gene: 34499164

Centisome position: 84.49

GC content: 70.31

Gene sequence:

>357_bases
ATGGGAAGAGAGAAAACAGGCGGGCTGGTGTATTCGACCGAGCACGGACGGATGTGTCCGGCTTGCCGGCTGCCGGAGGC
GCAATGCCAATGCAAGGCGCAGGCGGCGCCGGCCGGCGACGGCGTCGTCCGGGTGTCCAGGGAGACCAAGGGCCGAGGCG
GCAAGGCGGTGACGGTGGTGAAAGGGCTGCCGTTGGCGGCCGACGAGCTGGCCAAGGTGGGCAAGCAGCTGCGCGCGCGC
TGCGGCAGCGGCGGCACGGTGAAGGACTGGACGCTGGAAATCCAGGGCGACCACGTCGAGACCGTGGTCGCCGAGCTGGC
CAGGCTGGGTTTCAAGGCCAAGCGGGCGGGCGGCTAG

Upstream 100 bases:

>100_bases
TTCTTGATTTTGCAGGAAATTTACAAATAAACAATGGCATGGCGCATAGCCGCGTTTTGCCGGGATGGCATGGCTGGCTA
TGCCAGGGAGTGGAGCGGAG

Downstream 100 bases:

>100_bases
GCGCCGCTCGGCGGGATCAGAATTTCCGGCCCAGCGCCGCCTTGTGCATGATGGTGGACGCGATTTCCTCGATCGACTTG
TGCGTGGTGCTGATGAAGGG

Product: translation initiation factor Sui1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MGREKTGGLVYSTEHGRMCPACRLPEAQCQCKAQAAPAGDGVVRVSRETKGRGGKAVTVVKGLPLAADELAKVGKQLRAR
CGSGGTVKDWTLEIQGDHVETVVAELARLGFKAKRAGG

Sequences:

>Translated_118_residues
MGREKTGGLVYSTEHGRMCPACRLPEAQCQCKAQAAPAGDGVVRVSRETKGRGGKAVTVVKGLPLAADELAKVGKQLRAR
CGSGGTVKDWTLEIQGDHVETVVAELARLGFKAKRAGG
>Mature_117_residues
GREKTGGLVYSTEHGRMCPACRLPEAQCQCKAQAAPAGDGVVRVSRETKGRGGKAVTVVKGLPLAADELAKVGKQLRARC
GSGGTVKDWTLEIQGDHVETVVAELARLGFKAKRAGG

Specific function: Unknown

COG id: COG0023

COG function: function code J; Translation initiation factor 1 (eIF-1/SUI1) and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SUI1 family [H]

Homologues:

Organism=Escherichia coli, GI87081867, Length=110, Percent_Identity=45.4545454545455, Blast_Score=82, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005872
- InterPro:   IPR001950 [H]

Pfam domain/function: PF01253 SUI1 [H]

EC number: NA

Molecular weight: Translated: 12316; Mature: 12185

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: PS50296 SUI1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGREKTGGLVYSTEHGRMCPACRLPEAQCQCKAQAAPAGDGVVRVSRETKGRGGKAVTVV
CCCCCCCCEEEECCCCCCCCCCCCCCHHHHEECCCCCCCCCEEEEECCCCCCCCCEEEEE
KGLPLAADELAKVGKQLRARCGSGGTVKDWTLEIQGDHVETVVAELARLGFKAKRAGG
ECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
GREKTGGLVYSTEHGRMCPACRLPEAQCQCKAQAAPAGDGVVRVSRETKGRGGKAVTVV
CCCCCCCEEEECCCCCCCCCCCCCCHHHHEECCCCCCCCCEEEEECCCCCCCCCEEEEE
KGLPLAADELAKVGKQLRARCGSGGTVKDWTLEIQGDHVETVVAELARLGFKAKRAGG
ECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2956254; 9097039; 9278503; 10497266 [H]