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The map label for this gene is ugpA [H]

Identifier: 34499110

GI number: 34499110

Start: 3953982

End: 3954863

Strand: Reverse

Name: ugpA [H]

Synonym: CV_3655

Alternate gene names: 34499110

Gene position: 3954863-3953982 (Counterclockwise)

Preceding gene: 34499111

Following gene: 34499109

Centisome position: 83.24

GC content: 64.17

Gene sequence:

>882_bases
ATGCAGAATCGCATTCATTTTTCCAATCGCTGGCTGGGTTTCGCCTTGATGGCGCCGCAGCTGGCGATCACCTTGATCTT
CTTCCTGTGGCCGGCGCTGGAGGCGCTGTGGCAGTCGGTGCAGCAGCAGGACCCGTTCGGCCTGGACAGCCAGTTCGTCG
GCCTGGCCAATTTCAGCCTGCTGTTCCATGACCCGCTGTATCTGGGCACCATCCAGACCACGCTGCTGTTCAGCGCGCTG
GTGACCTTGCTGGGCACCGGCAGCGCGCTGATCCTGGCGGTGATGGCCAATCAGATCGTCCGCGGCAGGCGCGTCTACCA
GACGGTGCTGATCGCGCCGTACGCCATCGCGCCGTCGGTGGTGGCGGTGCTGTGGCTGTTCCTGTTCAACCCCAGCCTGG
GCTGGATCAGCTACCTGCTGCGCGAGGCCGGCTACGAGTGGAACCACGCGCTCAACGGCGGCCAGGCGCTGCTGCTGGTG
GTGCTGGCCTCGGCCTGGAAGCAGATCAGCTACAACTTCCTGTTCTTCTACGCCGGCCTGCAGGCGATACCGGCGTCCTT
GATCGAAGCGGCGGCGATAGACGGCGCCGGCCCCTTGCGCCGCTTCCGCGACCTGGTGTTCCCGTTGCTGTCGCCGACCA
GCTTCTTCCTGCTGGTGGTCAACCTGGTGTACGCCTTCTTCGATACTTTCGCGGTGATCGACGCAGCCACCGGCGGCGGG
CCGGGCAAGTCCACCGAGACCATGATCCTCAAGGTGTATCTGGAAGGCTTCAAGGGCCTGGACCTGGGCAGCTCGGCCGC
GCAGTCGGTGGTGCTGATGGCGGTGGTCGGCCTGTTGACGCTGATCCAGTTCCGTTACGTGGAAAGAAAGGTGCAGTACT
GA

Upstream 100 bases:

>100_bases
CGGCAACGAGCTGCTGCGCCGTTTCGAGAAAACCGCCAATTGATCCATCCGGAAACGGGCGCGCCGCGAGGCCGCCCGTT
TTTCTCGATAGAGTCCACGC

Downstream 100 bases:

>100_bases
TGGTGGAGAACCGTAAAGGGCTGGACCTGTTCTGCCACGCGATGCTGATCGCGGGCATGCTGGTGGTGGCCTTTCCCTTG
TATCTGATGCTGGTCGCCGC

Product: sn-glycerol-3-phosphate transport system, permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MQNRIHFSNRWLGFALMAPQLAITLIFFLWPALEALWQSVQQQDPFGLDSQFVGLANFSLLFHDPLYLGTIQTTLLFSAL
VTLLGTGSALILAVMANQIVRGRRVYQTVLIAPYAIAPSVVAVLWLFLFNPSLGWISYLLREAGYEWNHALNGGQALLLV
VLASAWKQISYNFLFFYAGLQAIPASLIEAAAIDGAGPLRRFRDLVFPLLSPTSFFLLVVNLVYAFFDTFAVIDAATGGG
PGKSTETMILKVYLEGFKGLDLGSSAAQSVVLMAVVGLLTLIQFRYVERKVQY

Sequences:

>Translated_293_residues
MQNRIHFSNRWLGFALMAPQLAITLIFFLWPALEALWQSVQQQDPFGLDSQFVGLANFSLLFHDPLYLGTIQTTLLFSAL
VTLLGTGSALILAVMANQIVRGRRVYQTVLIAPYAIAPSVVAVLWLFLFNPSLGWISYLLREAGYEWNHALNGGQALLLV
VLASAWKQISYNFLFFYAGLQAIPASLIEAAAIDGAGPLRRFRDLVFPLLSPTSFFLLVVNLVYAFFDTFAVIDAATGGG
PGKSTETMILKVYLEGFKGLDLGSSAAQSVVLMAVVGLLTLIQFRYVERKVQY
>Mature_293_residues
MQNRIHFSNRWLGFALMAPQLAITLIFFLWPALEALWQSVQQQDPFGLDSQFVGLANFSLLFHDPLYLGTIQTTLLFSAL
VTLLGTGSALILAVMANQIVRGRRVYQTVLIAPYAIAPSVVAVLWLFLFNPSLGWISYLLREAGYEWNHALNGGQALLLV
VLASAWKQISYNFLFFYAGLQAIPASLIEAAAIDGAGPLRRFRDLVFPLLSPTSFFLLVVNLVYAFFDTFAVIDAATGGG
PGKSTETMILKVYLEGFKGLDLGSSAAQSVVLMAVVGLLTLIQFRYVERKVQY

Specific function: Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=292, Percent_Identity=64.7260273972603, Blast_Score=365, Evalue=1e-102,
Organism=Escherichia coli, GI1787570, Length=254, Percent_Identity=31.8897637795276, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1790465, Length=258, Percent_Identity=28.2945736434109, Blast_Score=88, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32325; Mature: 32325

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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CCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA