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The map label for this gene is ugpE [H]

Identifier: 34499109

GI number: 34499109

Start: 3953143

End: 3953982

Strand: Reverse

Name: ugpE [H]

Synonym: CV_3654

Alternate gene names: 34499109

Gene position: 3953982-3953143 (Counterclockwise)

Preceding gene: 34499110

Following gene: 34499108

Centisome position: 83.22

GC content: 63.45

Gene sequence:

>840_bases
ATGGTGGAGAACCGTAAAGGGCTGGACCTGTTCTGCCACGCGATGCTGATCGCGGGCATGCTGGTGGTGGCCTTTCCCTT
GTATCTGATGCTGGTCGCCGCCAGTCAGGACGCCGATCAGGTGACGCGGGTGCCGCTGTCGCTGCTGCCCGGCAGCCAGC
TGTGGACCAACCTTTCCACCGTGCTGTGGAACGGCAGCGGCGGGTTGGCGGTGCCGCTGGCGCGCACGCTGTGGAACAGC
TTCGTGATGGCGATGCTGATCGCCGTCGGCAAGATCGTCATTTCCTTCCTGTCGGCCTACGCCATCGTCTATTTCCGCTT
CCCGCTGCGCAAGACCGGCTTCGCGCTGATCTTCGTCACACTGATGCTGCCGGTGGAGGTGCGCATCTTCCCGACGGTGG
AAGTGGTGACCAAGATGGGGCTGATCAACAGCTATACCGGCCTGACGCTGCCCTTGATCGCGTCCGCCACCGCCACCTTC
CTGCTGCGGCAGTTCTTCATGACGCTGCCCAAGGAATTGATGGAGGCGTCGCGGGTGGACGGCGCGGGGCCGATCCGCTT
CATGGTGGACGTGGTGCTGCCCTTGTCGCGCACCAATATCGCGGCCTTGTTCGTGATTACCTTCATCTACGGCTGGAACC
AGTATCTGTGGCCGCTCTTGGTCACCCATGATCCGGCGATGTCCACCTCGGTGATCGCGATCAAGGGCATGCTGGGCGAG
GGCGCGGTGCAGTGGCACCTGGTGATGGCGTCCGCGCTCTTGACCCTGCTGCCGCCGCTGGCGGTGGTGATCGGCATGCA
GCGCTGGTTCGTCAAGGGCCTGGTGGACAACGAGAAATGA

Upstream 100 bases:

>100_bases
ACCTGGGCAGCTCGGCCGCGCAGTCGGTGGTGCTGATGGCGGTGGTCGGCCTGTTGACGCTGATCCAGTTCCGTTACGTG
GAAAGAAAGGTGCAGTACTG

Downstream 100 bases:

>100_bases
GAAAGAGCGCCAAATGGCAAAACTGAGTCTGAAGAATATCGCCAAGCGCTATCCCGGCGCCGAGCGCCGGGTGCTGGAAG
AGATTTCGGCGGAGATCGCC

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MVENRKGLDLFCHAMLIAGMLVVAFPLYLMLVAASQDADQVTRVPLSLLPGSQLWTNLSTVLWNGSGGLAVPLARTLWNS
FVMAMLIAVGKIVISFLSAYAIVYFRFPLRKTGFALIFVTLMLPVEVRIFPTVEVVTKMGLINSYTGLTLPLIASATATF
LLRQFFMTLPKELMEASRVDGAGPIRFMVDVVLPLSRTNIAALFVITFIYGWNQYLWPLLVTHDPAMSTSVIAIKGMLGE
GAVQWHLVMASALLTLLPPLAVVIGMQRWFVKGLVDNEK

Sequences:

>Translated_279_residues
MVENRKGLDLFCHAMLIAGMLVVAFPLYLMLVAASQDADQVTRVPLSLLPGSQLWTNLSTVLWNGSGGLAVPLARTLWNS
FVMAMLIAVGKIVISFLSAYAIVYFRFPLRKTGFALIFVTLMLPVEVRIFPTVEVVTKMGLINSYTGLTLPLIASATATF
LLRQFFMTLPKELMEASRVDGAGPIRFMVDVVLPLSRTNIAALFVITFIYGWNQYLWPLLVTHDPAMSTSVIAIKGMLGE
GAVQWHLVMASALLTLLPPLAVVIGMQRWFVKGLVDNEK
>Mature_279_residues
MVENRKGLDLFCHAMLIAGMLVVAFPLYLMLVAASQDADQVTRVPLSLLPGSQLWTNLSTVLWNGSGGLAVPLARTLWNS
FVMAMLIAVGKIVISFLSAYAIVYFRFPLRKTGFALIFVTLMLPVEVRIFPTVEVVTKMGLINSYTGLTLPLIASATATF
LLRQFFMTLPKELMEASRVDGAGPIRFMVDVVLPLSRTNIAALFVITFIYGWNQYLWPLLVTHDPAMSTSVIAIKGMLGE
GAVQWHLVMASALLTLLPPLAVVIGMQRWFVKGLVDNEK

Specific function: Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=281, Percent_Identity=59.7864768683274, Blast_Score=340, Evalue=6e-95,
Organism=Escherichia coli, GI1787571, Length=280, Percent_Identity=24.6428571428571, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1790464, Length=291, Percent_Identity=24.0549828178694, Blast_Score=71, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30721; Mature: 30721

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVENRKGLDLFCHAMLIAGMLVVAFPLYLMLVAASQDADQVTRVPLSLLPGSQLWTNLST
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHCCCHHHHHHHHH
VLWNGSGGLAVPLARTLWNSFVMAMLIAVGKIVISFLSAYAIVYFRFPLRKTGFALIFVT
HEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LMLPVEVRIFPTVEVVTKMGLINSYTGLTLPLIASATATFLLRQFFMTLPKELMEASRVD
HHHHHHEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GAGPIRFMVDVVLPLSRTNIAALFVITFIYGWNQYLWPLLVTHDPAMSTSVIAIKGMLGE
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHEEECCCCC
GAVQWHLVMASALLTLLPPLAVVIGMQRWFVKGLVDNEK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVENRKGLDLFCHAMLIAGMLVVAFPLYLMLVAASQDADQVTRVPLSLLPGSQLWTNLST
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHCCCHHHHHHHHH
VLWNGSGGLAVPLARTLWNSFVMAMLIAVGKIVISFLSAYAIVYFRFPLRKTGFALIFVT
HEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LMLPVEVRIFPTVEVVTKMGLINSYTGLTLPLIASATATFLLRQFFMTLPKELMEASRVD
HHHHHHEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GAGPIRFMVDVVLPLSRTNIAALFVITFIYGWNQYLWPLLVTHDPAMSTSVIAIKGMLGE
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHEEECCCCC
GAVQWHLVMASALLTLLPPLAVVIGMQRWFVKGLVDNEK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA