| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is suhB [H]
Identifier: 34499099
GI number: 34499099
Start: 3941559
End: 3942350
Strand: Reverse
Name: suhB [H]
Synonym: CV_3644
Alternate gene names: 34499099
Gene position: 3942350-3941559 (Counterclockwise)
Preceding gene: 34499102
Following gene: 34499098
Centisome position: 82.98
GC content: 63.01
Gene sequence:
>792_bases ATGCATCCGATGCTCAATGTCGCGGTTAAAGCCGCTCGCCGCGCAGGCAGTGTTATCCAGCGCGCGTCGCTCAACCTCGA CGCCATCCGCGTAGAGAAGAAAAAGCACAATGACTTTGTGACCGAGGTGGATCGCGCCGCCGAGGAAGCGATCATCAACG TCATTCTCGAAGCCTATCCGAAGCACGCGATTCTAGCAGAAGAGTCCGGCGCCAAAGGCGTGGGTTCTTCCGAATACGAA TGGATCATCGACCCGATCGACGGCACCACCAATTTCCTGCACGGCCACCCCCAGTACGGCATCTCTATCGCGATGGCGCA CAAGGGCCAGATCCAGCAGGCGGTGGTCTACGACCCGAACCGCAACGATCTGTTCACCGCCTCGCGCGGCGTCGGCGCCT TCCTCAACGATCGCCGCATCCGCGTGTCCAAGCGCTTCATGATGAACGAGTGCCTGATCGGCACCGGCTTCCCGGTTTCC GACCAGAGCTATCTCGACCAGTACCTCGGCATGCTGAAGGACGTGATAGCCAAGACCGCGGGCGTGCGCCGCGAAGGCGC CGCGTCGCTGGACCTGTGCAACGTCGCCTGCGGCCGCACCGAAGGTTTCTTCGAACTGAACCTGAAGCCGTGGGACATCG CGGCCGGCAGTCTGATCGTGCAGGAAGCGGGCGGCATCGTCACCGACCCCACCGGCGAGCAGGGCTGGTTCGAGTCCGGC GACATCGTCGCGGGCAACCCGAAAGTGCTGGCCCAGCTGCTGCAGCTGCTGGCGCCGCACGTCGCCAAGTAA
Upstream 100 bases:
>100_bases CCCAGGCGTCGGGTTTTTTTGTTCCTTAACCCAGATTGTTACCGGCGGGTGTCGCGTCATCGACGGACACCCGCCCATCG TTCAAGTGTAGAGGCCGTCA
Downstream 100 bases:
>100_bases GCGCATATCCGCATTCCGAAAACGGCAGGCCATCAGGCCTGCCGTTTTTTTTGCCCTCGCAAGCACAGCGCGCGGAACTG TTGCCATCGCGGCCGCTCTA
Product: myo-inositol-1(or 4)-monophosphatase
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MHPMLNVAVKAARRAGSVIQRASLNLDAIRVEKKKHNDFVTEVDRAAEEAIINVILEAYPKHAILAEESGAKGVGSSEYE WIIDPIDGTTNFLHGHPQYGISIAMAHKGQIQQAVVYDPNRNDLFTASRGVGAFLNDRRIRVSKRFMMNECLIGTGFPVS DQSYLDQYLGMLKDVIAKTAGVRREGAASLDLCNVACGRTEGFFELNLKPWDIAAGSLIVQEAGGIVTDPTGEQGWFESG DIVAGNPKVLAQLLQLLAPHVAK
Sequences:
>Translated_263_residues MHPMLNVAVKAARRAGSVIQRASLNLDAIRVEKKKHNDFVTEVDRAAEEAIINVILEAYPKHAILAEESGAKGVGSSEYE WIIDPIDGTTNFLHGHPQYGISIAMAHKGQIQQAVVYDPNRNDLFTASRGVGAFLNDRRIRVSKRFMMNECLIGTGFPVS DQSYLDQYLGMLKDVIAKTAGVRREGAASLDLCNVACGRTEGFFELNLKPWDIAAGSLIVQEAGGIVTDPTGEQGWFESG DIVAGNPKVLAQLLQLLAPHVAK >Mature_263_residues MHPMLNVAVKAARRAGSVIQRASLNLDAIRVEKKKHNDFVTEVDRAAEEAIINVILEAYPKHAILAEESGAKGVGSSEYE WIIDPIDGTTNFLHGHPQYGISIAMAHKGQIQQAVVYDPNRNDLFTASRGVGAFLNDRRIRVSKRFMMNECLIGTGFPVS DQSYLDQYLGMLKDVIAKTAGVRREGAASLDLCNVACGRTEGFFELNLKPWDIAAGSLIVQEAGGIVTDPTGEQGWFESG DIVAGNPKVLAQLLQLLAPHVAK
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI7657236, Length=255, Percent_Identity=36.8627450980392, Blast_Score=162, Evalue=4e-40, Organism=Homo sapiens, GI5031789, Length=253, Percent_Identity=34.3873517786561, Blast_Score=147, Evalue=7e-36, Organism=Homo sapiens, GI221625487, Length=253, Percent_Identity=34.3873517786561, Blast_Score=147, Evalue=1e-35, Organism=Homo sapiens, GI221625507, Length=144, Percent_Identity=38.8888888888889, Blast_Score=103, Evalue=2e-22, Organism=Escherichia coli, GI1788882, Length=254, Percent_Identity=48.8188976377953, Blast_Score=260, Evalue=8e-71, Organism=Caenorhabditis elegans, GI193202572, Length=267, Percent_Identity=35.9550561797753, Blast_Score=153, Evalue=7e-38, Organism=Caenorhabditis elegans, GI193202570, Length=268, Percent_Identity=34.3283582089552, Blast_Score=149, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6320493, Length=201, Percent_Identity=36.81592039801, Blast_Score=134, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6321836, Length=235, Percent_Identity=26.3829787234043, Blast_Score=90, Evalue=5e-19, Organism=Drosophila melanogaster, GI21357329, Length=253, Percent_Identity=35.1778656126482, Blast_Score=142, Evalue=2e-34, Organism=Drosophila melanogaster, GI24664922, Length=258, Percent_Identity=32.1705426356589, Blast_Score=138, Evalue=4e-33, Organism=Drosophila melanogaster, GI21357303, Length=234, Percent_Identity=33.7606837606838, Blast_Score=134, Evalue=7e-32, Organism=Drosophila melanogaster, GI24664926, Length=231, Percent_Identity=33.3333333333333, Blast_Score=128, Evalue=3e-30, Organism=Drosophila melanogaster, GI21357957, Length=266, Percent_Identity=33.8345864661654, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI24664918, Length=254, Percent_Identity=31.496062992126, Blast_Score=118, Evalue=3e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 28597; Mature: 28597
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPMLNVAVKAARRAGSVIQRASLNLDAIRVEKKKHNDFVTEVDRAAEEAIINVILEAYP CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHCC KHAILAEESGAKGVGSSEYEWIIDPIDGTTNFLHGHPQYGISIAMAHKGQIQQAVVYDPN CCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCC RNDLFTASRGVGAFLNDRRIRVSKRFMMNECLIGTGFPVSDQSYLDQYLGMLKDVIAKTA CCCEEECCCCCCHHHCCCCHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHH GVRREGAASLDLCNVACGRTEGFFELNLKPWDIAAGSLIVQEAGGIVTDPTGEQGWFESG CCCCCCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCEEEEECCCCEEECCCCCCCCCCCC DIVAGNPKVLAQLLQLLAPHVAK CEEECCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHPMLNVAVKAARRAGSVIQRASLNLDAIRVEKKKHNDFVTEVDRAAEEAIINVILEAYP CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHCC KHAILAEESGAKGVGSSEYEWIIDPIDGTTNFLHGHPQYGISIAMAHKGQIQQAVVYDPN CCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCC RNDLFTASRGVGAFLNDRRIRVSKRFMMNECLIGTGFPVSDQSYLDQYLGMLKDVIAKTA CCCEEECCCCCCHHHCCCCHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHH GVRREGAASLDLCNVACGRTEGFFELNLKPWDIAAGSLIVQEAGGIVTDPTGEQGWFESG CCCCCCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCEEEEECCCCEEECCCCCCCCCCCC DIVAGNPKVLAQLLQLLAPHVAK CEEECCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10761919 [H]