| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is purA2
Identifier: 34498983
GI number: 34498983
Start: 3835680
End: 3836975
Strand: Reverse
Name: purA2
Synonym: CV_3528
Alternate gene names: 34498983
Gene position: 3836975-3835680 (Counterclockwise)
Preceding gene: 34498984
Following gene: 34498980
Centisome position: 80.76
GC content: 65.35
Gene sequence:
>1296_bases ATGTCCAAGAACGTTGTCGTGATTGGCACCCAGTGGGGTGACGAAGGCAAAGGCAAAATCGTTGACTGGCTGACCGACCA CGCGCGTGCCGTTGTGCGCTTCCAAGGCGGCCACAACGCCGGCCACACCCTGTGGGTGAATGGCAAGAAAACCGTCGTGC GCCTGGTGCCGTCCGGCATTCTGCGCCCGGATGTGGAGTGCTTCATCGGCAACGGCGTGGTGCTGTCGCCGGAAGCGCTG CTGAAGGAGATCGACGAGCTGGAGGCCGCCGGCGTCAACGCCTCCGCCCGCCTGAAGATCGCCGAAGGCTGCCCGCTGAT CCTGCCGTACCACATCGCGCTGGACCAGGCCCGCGAAGCCGCCAAGGGCGACGCCAAGATCGGCACCACCGGCCGCGGCA TCGGCCCCTGCTACGAAGACAAGGTGGCCCGCCGCGCGCTGAAGGTGATCGACCTGTTCGATCCGGCCCGCTTCGAGACC AAGCTGAAGGAAAACGTAGACTACTACAACTTCCTGCTGACCAATCTGTTCAAGGCCGAGCCGGTGAGCTATGAAGCGAT CCTGGCCGACACCATGAAGATGGCCGAGCGCATCAAGCCGATGGTGGCCGACGTGTCCCGCACCCTGTACGACCTGGACA AGGCCGGCACGCCCATTCTGTTCGAAGGCGCGCAGGGTACGCTGCTGGACATCGACCACGGCACTTACCCGTATGTCACC TCGTCCAACTGCGTGGCCGGCGCCGCCGCGCCGGGCGCCGGCGTGCCGCCGCAAATGCTGAACTACGTGCTGGGCATCGT GAAGGGCTACGCCACCCGCGTCGGCTCCGGTCCGTTCCCGACCGAGCAGGAAAACGAAATCGGCGCCTTCCTGGCCAAGC GCGGCAACGAGTTCGGCTCCGTCACCGGTCGTCCGCGCCGCTGCGGCTGGTTCGACGCCGCCGCGCTGAAGCGCTCGATC CAGATCAACGGCGTGTCCGGCCTGTGCGTGATGAAGCTGGACGTGATGGACGGCCTGGAAGAGATCAAGCTGTGCACCGG CTACATGCTGGATGGCCAGAAGGTCGACATCTTGCCGTTCGGTTCCGATGCCGTCACCAAGTGCGAGCCGGTGTACGAAA CCCTGCCGGGCTGGACCGGCACCACCGTCGGCGTCAAGCGCTGGGAAGACCTGCCGGCCAACGCCCAGGCTTACCTGAAG CGCATCGAAGAAGTTTGCGGCGCGCCGGTCGACATCGTGTCCACCGGTCCGGACCGCGAAGAAACCATCGTGCTGCGCCA CCCGTTCGGCCTGTAA
Upstream 100 bases:
>100_bases CAATTGCGACCGAGAGTTGGTTCCCGCTGCCGATGGTTGGCAGCTGGCGCCGTTTCATTGAATTTTTGTTTGAATCTGAC TGACGAAGAGGTTTTTTCCA
Downstream 100 bases:
>100_bases GCCGAGCGCTGGTTCCCGCTGTTGGAAAGCCCACCGCTTGCGGTGGGCTTTTTGTTTGCCTGCTGGGGCCTGCTCATGAA TGGCTTCCGGCGCCGGACGC
Product: adenylosuccinate synthetase
Products: NA
Alternate protein names: AMPSase 2; AdSS 2; IMP--aspartate ligase 2
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MSKNVVVIGTQWGDEGKGKIVDWLTDHARAVVRFQGGHNAGHTLWVNGKKTVVRLVPSGILRPDVECFIGNGVVLSPEAL LKEIDELEAAGVNASARLKIAEGCPLILPYHIALDQAREAAKGDAKIGTTGRGIGPCYEDKVARRALKVIDLFDPARFET KLKENVDYYNFLLTNLFKAEPVSYEAILADTMKMAERIKPMVADVSRTLYDLDKAGTPILFEGAQGTLLDIDHGTYPYVT SSNCVAGAAAPGAGVPPQMLNYVLGIVKGYATRVGSGPFPTEQENEIGAFLAKRGNEFGSVTGRPRRCGWFDAAALKRSI QINGVSGLCVMKLDVMDGLEEIKLCTGYMLDGQKVDILPFGSDAVTKCEPVYETLPGWTGTTVGVKRWEDLPANAQAYLK RIEEVCGAPVDIVSTGPDREETIVLRHPFGL
Sequences:
>Translated_431_residues MSKNVVVIGTQWGDEGKGKIVDWLTDHARAVVRFQGGHNAGHTLWVNGKKTVVRLVPSGILRPDVECFIGNGVVLSPEAL LKEIDELEAAGVNASARLKIAEGCPLILPYHIALDQAREAAKGDAKIGTTGRGIGPCYEDKVARRALKVIDLFDPARFET KLKENVDYYNFLLTNLFKAEPVSYEAILADTMKMAERIKPMVADVSRTLYDLDKAGTPILFEGAQGTLLDIDHGTYPYVT SSNCVAGAAAPGAGVPPQMLNYVLGIVKGYATRVGSGPFPTEQENEIGAFLAKRGNEFGSVTGRPRRCGWFDAAALKRSI QINGVSGLCVMKLDVMDGLEEIKLCTGYMLDGQKVDILPFGSDAVTKCEPVYETLPGWTGTTVGVKRWEDLPANAQAYLK RIEEVCGAPVDIVSTGPDREETIVLRHPFGL >Mature_430_residues SKNVVVIGTQWGDEGKGKIVDWLTDHARAVVRFQGGHNAGHTLWVNGKKTVVRLVPSGILRPDVECFIGNGVVLSPEALL KEIDELEAAGVNASARLKIAEGCPLILPYHIALDQAREAAKGDAKIGTTGRGIGPCYEDKVARRALKVIDLFDPARFETK LKENVDYYNFLLTNLFKAEPVSYEAILADTMKMAERIKPMVADVSRTLYDLDKAGTPILFEGAQGTLLDIDHGTYPYVTS SNCVAGAAAPGAGVPPQMLNYVLGIVKGYATRVGSGPFPTEQENEIGAFLAKRGNEFGSVTGRPRRCGWFDAAALKRSIQ INGVSGLCVMKLDVMDGLEEIKLCTGYMLDGQKVDILPFGSDAVTKCEPVYETLPGWTGTTVGVKRWEDLPANAQAYLKR IEEVCGAPVDIVSTGPDREETIVLRHPFGL
Specific function: Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP
COG id: COG0104
COG function: function code F; Adenylosuccinate synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylosuccinate synthetase family
Homologues:
Organism=Homo sapiens, GI22748717, Length=430, Percent_Identity=43.7209302325581, Blast_Score=345, Evalue=3e-95, Organism=Homo sapiens, GI34577063, Length=432, Percent_Identity=42.3611111111111, Blast_Score=325, Evalue=5e-89, Organism=Homo sapiens, GI40316944, Length=397, Percent_Identity=42.5692695214106, Blast_Score=308, Evalue=7e-84, Organism=Escherichia coli, GI1790620, Length=430, Percent_Identity=60.4651162790698, Blast_Score=542, Evalue=1e-155, Organism=Caenorhabditis elegans, GI25146553, Length=433, Percent_Identity=41.3394919168591, Blast_Score=308, Evalue=4e-84, Organism=Caenorhabditis elegans, GI25146555, Length=433, Percent_Identity=41.3394919168591, Blast_Score=308, Evalue=4e-84, Organism=Saccharomyces cerevisiae, GI6324109, Length=429, Percent_Identity=43.5897435897436, Blast_Score=343, Evalue=3e-95, Organism=Drosophila melanogaster, GI21356033, Length=425, Percent_Identity=42.8235294117647, Blast_Score=324, Evalue=8e-89,
Paralogues:
None
Copy number: 940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): PURA2_CHRVO (Q7NS98)
Other databases:
- EMBL: AE016825 - RefSeq: NP_903198.1 - ProteinModelPortal: Q7NS98 - SMR: Q7NS98 - GeneID: 2547652 - GenomeReviews: AE016825_GR - KEGG: cvi:CV_3528 - NMPDR: fig|243365.1.peg.3528 - HOGENOM: HBG658237 - OMA: YVLGIIK - PhylomeDB: Q7NS98 - ProtClustDB: PRK01117 - BioCyc: CVIO243365:CV_3528-MONOMER - BRENDA: 6.3.4.4 - GO: GO:0005737 - HAMAP: MF_00011 - InterPro: IPR018220 - InterPro: IPR001114 - PANTHER: PTHR11846 - SMART: SM00788 - TIGRFAMs: TIGR00184
Pfam domain/function: PF00709 Adenylsucc_synt
EC number: =6.3.4.4
Molecular weight: Translated: 46638; Mature: 46507
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: PS01266 ADENYLOSUCCIN_SYN_1; PS00513 ADENYLOSUCCIN_SYN_2
Important sites: ACT_SITE 14-14 ACT_SITE 42-42 BINDING 130-130 BINDING 144-144 BINDING 225-225 BINDING 240-240 BINDING 304-304 BINDING 306-306
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKNVVVIGTQWGDEGKGKIVDWLTDHARAVVRFQGGHNAGHTLWVNGKKTVVRLVPSGI CCCCEEEEEECCCCCCCCCCHHHHHHCCEEEEEEECCCCCCCEEEECCCEEEEEECCCCC LRPDVECFIGNGVVLSPEALLKEIDELEAAGVNASARLKIAEGCPLILPYHIALDQAREA CCCCCEEEECCCEEECHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEHHHHHHHHHHH AKGDAKIGTTGRGIGPCYEDKVARRALKVIDLFDPARFETKLKENVDYYNFLLTNLFKAE HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHCC PVSYEAILADTMKMAERIKPMVADVSRTLYDLDKAGTPILFEGAQGTLLDIDHGTYPYVT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCCCCCEEE SSNCVAGAAAPGAGVPPQMLNYVLGIVKGYATRVGSGPFPTEQENEIGAFLAKRGNEFGS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCC VTGRPRRCGWFDAAALKRSIQINGVSGLCVMKLDVMDGLEEIKLCTGYMLDGQKVDILPF CCCCCCCCCCHHHHHHHCEEEECCCCCEEEEEEHHHCCHHHHHHHHCEEECCCEEEEEEC GSDAVTKCEPVYETLPGWTGTTVGVKRWEDLPANAQAYLKRIEEVCGAPVDIVSTGPDRE CCCCCHHCCHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCC ETIVLRHPFGL CEEEEECCCCC >Mature Secondary Structure SKNVVVIGTQWGDEGKGKIVDWLTDHARAVVRFQGGHNAGHTLWVNGKKTVVRLVPSGI CCCEEEEEECCCCCCCCCCHHHHHHCCEEEEEEECCCCCCCEEEECCCEEEEEECCCCC LRPDVECFIGNGVVLSPEALLKEIDELEAAGVNASARLKIAEGCPLILPYHIALDQAREA CCCCCEEEECCCEEECHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEHHHHHHHHHHH AKGDAKIGTTGRGIGPCYEDKVARRALKVIDLFDPARFETKLKENVDYYNFLLTNLFKAE HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHCC PVSYEAILADTMKMAERIKPMVADVSRTLYDLDKAGTPILFEGAQGTLLDIDHGTYPYVT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCCCCCEEE SSNCVAGAAAPGAGVPPQMLNYVLGIVKGYATRVGSGPFPTEQENEIGAFLAKRGNEFGS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCC VTGRPRRCGWFDAAALKRSIQINGVSGLCVMKLDVMDGLEEIKLCTGYMLDGQKVDILPF CCCCCCCCCCHHHHHHHCEEEECCCCCEEEEEEHHHCCHHHHHHHHCEEECCCEEEEEEC GSDAVTKCEPVYETLPGWTGTTVGVKRWEDLPANAQAYLKRIEEVCGAPVDIVSTGPDRE CCCCCHHCCHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCC ETIVLRHPFGL CEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 14500782