| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is acpA [H]
Identifier: 34498980
GI number: 34498980
Start: 3831499
End: 3833601
Strand: Reverse
Name: acpA [H]
Synonym: CV_3525
Alternate gene names: 34498980
Gene position: 3833601-3831499 (Counterclockwise)
Preceding gene: 34498983
Following gene: 34498979
Centisome position: 80.69
GC content: 66.57
Gene sequence:
>2103_bases ATGCAACGTTTAGCCTGTGGGCTGGCGCTGACCGTGATCGGCGCCGCCGTTTTGAGCGCCTGCGGCAGCGCCGGCGGCTC GGCCTCCACCAGCGGGGTGGTGACCGGCAGCTACTTCCGCCATGCCAAAGTCTGCCTCGATCGTAACGGCAACGGCCGCT GCGACAGCACCGAAATCTCGACCTACACCGACGACAACGGCGCGTTCAGCCTCAATGGGCAGGGCGATGTGGTGGTCGAA GTGGGAACCGATGCCGTCCGCTACGATCCCGACGCCAAAACCGCGACGCCGGTGACCGACCCCTTGGTGTTCCGCGCGCC GGCTTCCGCCCCTGGCGTGGTCAGCTCGTTGTCCACGGAAGTGGCCGACCTGATGGACGGCGGCATGGACCTCGCCAGCG CGCGCGGCGCGGTGGCGGCCCGAGTGGGCGTGCCGGCGGATAAGCTGTTGGGTGACCATAACAAGGAAAGCGATCCCGAC GTCAAGGCGGCGTTGAAGGCGGCCATCAACCAGAACATCGACGCCATCGCCGGCGCGATGAAGGAGGCGGGCGCAGGTGG CGACGTCAAGGCCAGCCTGCACAAGCGGATGGCGCTGTCCGACATCAAGAACGTGGTGGTGATCTACGCCGAGAACCGCG GCTTCGACAATCTGTACGGCCTGTTCCCCGGCGCCAACGGCGTGCCCGGCGTGAATCCGGCCTCCAAGGGCGGCTACGTC GCGCAGAAGGATTTCGACAACTCGGTTCTGCCGGCGCTGCCGCCCACCTGGGGCGGCCTGACCGCCGCCGGCCAGCCGGT GACGCTGAGCCAGGCGCAGACCATAGGTTTCGCCAACAAACCGTTCCAGATCGACGATCCCAACGGCCTGAACGGCACCG GCGTGGCGGTGCCGCAGTCGGTGGTCACCCGCGACCTGGTCCATCGCTTCTACAATAACCAGATGCAGATCAACGGCGGC GCCAACGACAAGTTCGCCGCCTACTCCGACGCCGGCAGCCTGTCCATGGGGTATTACGACGGCAGCAAGATGGCGATGTG GAAGCTGGCCCAGCAATACACGCTGGCCGACAACTTCTTCATGGGCGCTTTCGGCGGCTCCTTCCTCAACCACCAGTACC TGGTCTGCGCCTGCGCGCCGCAGTATCCGAATGCCGATGCCTCGCCGGCCAAGGGCAGCATCTCGGCGATAGACGTAGAC GGCAACGGCAACTTCATCCGCCTGACGCCGGCCGCCAATGCGCCGGCATCGGTGCTGTCCGGCCCGGCCAAGTACCTGAA CGACGGCAATCTGACGCCCAAGGACGCGGCCGGCATGTATTACGCGGTCAACACCATGCAGCCGGCGTTCCAGCCCAGCG GCAACGCCCCGGCTTCCGGCGATGCCAGCGGCCTCTACGCCGACCCGGCCAAGGCCAACACCTTGCCGGCCCAGACCCAG GCGACCATCGCCGACAGGCTGGACGCCAAGAAGGTGAGCTGGGCCTGGTATGCCGGCGGCTGGGCGCAGTCCACCGCCGA CCGCAGCAAGATCTACAATGGCAGCGTGCCGAATTTCCAGGCCCACCATCAGCCGTTCAACTACTACGCCGGCTTCGATC CTTCCAAGCAGGCGGCCTATCGCGGCCAGCACCTGAAGGATTTCGACCAGGACTTCCTGGGCGCGGCGGCGGCGGGCACG CTGCCGCAGGTGGCGTTCTACAAGCCGCAGGGCAATCTGAACCAGCATGCCGGCTACGCCAGCGTGGCCGATGGCGACGC CCACATCGCCTCGGTGATCGCCAAGCTGCAGCAGAGCCCGCAGTGGAAGAACATGCTGGTGGTGGTCACCTATGACGAGA ACGGCGGCTTCTACGATCACGCTGCGGTGCCCAAGGGCGACCGCTGGGGCCCGGGCACCCGCATCCCGGCCATGCTGATC TCGCCGTTCGCCAAGAAAGGCTATGTCGACCACACCCAATACGACACCGCGTCCATCCTGCGCTTCCTGACCCGCCGCTT CGGCCTGCAGCCGTTGCCGGGCGTGACCGCGCGCGACGTCGCGCTGGTGAGGAATGGCGGCAAGCCGATGGGGGACTTCA CCTCGGCGTTGACCTTCAACTGA
Upstream 100 bases:
>100_bases CAGCGTCTGTTTATACGGAAAATACTAACAGAATGTAAATGTAATGTAACATGCCGTCGCGATACTTCGCATTTTACCTT AAACAGCAAGGAAATCCGTG
Downstream 100 bases:
>100_bases GCCGCTGCGTGCAGGTGATGACAGGCCGCCCTTCCGGGCGGCTTTTTGTTAGCGTTCATGACATCCGGCATGGCGGTCGC CGGCAAGTGGTAAGATAAAA
Product: acid phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 700; Mature: 700
Protein sequence:
>700_residues MQRLACGLALTVIGAAVLSACGSAGGSASTSGVVTGSYFRHAKVCLDRNGNGRCDSTEISTYTDDNGAFSLNGQGDVVVE VGTDAVRYDPDAKTATPVTDPLVFRAPASAPGVVSSLSTEVADLMDGGMDLASARGAVAARVGVPADKLLGDHNKESDPD VKAALKAAINQNIDAIAGAMKEAGAGGDVKASLHKRMALSDIKNVVVIYAENRGFDNLYGLFPGANGVPGVNPASKGGYV AQKDFDNSVLPALPPTWGGLTAAGQPVTLSQAQTIGFANKPFQIDDPNGLNGTGVAVPQSVVTRDLVHRFYNNQMQINGG ANDKFAAYSDAGSLSMGYYDGSKMAMWKLAQQYTLADNFFMGAFGGSFLNHQYLVCACAPQYPNADASPAKGSISAIDVD GNGNFIRLTPAANAPASVLSGPAKYLNDGNLTPKDAAGMYYAVNTMQPAFQPSGNAPASGDASGLYADPAKANTLPAQTQ ATIADRLDAKKVSWAWYAGGWAQSTADRSKIYNGSVPNFQAHHQPFNYYAGFDPSKQAAYRGQHLKDFDQDFLGAAAAGT LPQVAFYKPQGNLNQHAGYASVADGDAHIASVIAKLQQSPQWKNMLVVVTYDENGGFYDHAAVPKGDRWGPGTRIPAMLI SPFAKKGYVDHTQYDTASILRFLTRRFGLQPLPGVTARDVALVRNGGKPMGDFTSALTFN
Sequences:
>Translated_700_residues MQRLACGLALTVIGAAVLSACGSAGGSASTSGVVTGSYFRHAKVCLDRNGNGRCDSTEISTYTDDNGAFSLNGQGDVVVE VGTDAVRYDPDAKTATPVTDPLVFRAPASAPGVVSSLSTEVADLMDGGMDLASARGAVAARVGVPADKLLGDHNKESDPD VKAALKAAINQNIDAIAGAMKEAGAGGDVKASLHKRMALSDIKNVVVIYAENRGFDNLYGLFPGANGVPGVNPASKGGYV AQKDFDNSVLPALPPTWGGLTAAGQPVTLSQAQTIGFANKPFQIDDPNGLNGTGVAVPQSVVTRDLVHRFYNNQMQINGG ANDKFAAYSDAGSLSMGYYDGSKMAMWKLAQQYTLADNFFMGAFGGSFLNHQYLVCACAPQYPNADASPAKGSISAIDVD GNGNFIRLTPAANAPASVLSGPAKYLNDGNLTPKDAAGMYYAVNTMQPAFQPSGNAPASGDASGLYADPAKANTLPAQTQ ATIADRLDAKKVSWAWYAGGWAQSTADRSKIYNGSVPNFQAHHQPFNYYAGFDPSKQAAYRGQHLKDFDQDFLGAAAAGT LPQVAFYKPQGNLNQHAGYASVADGDAHIASVIAKLQQSPQWKNMLVVVTYDENGGFYDHAAVPKGDRWGPGTRIPAMLI SPFAKKGYVDHTQYDTASILRFLTRRFGLQPLPGVTARDVALVRNGGKPMGDFTSALTFN >Mature_700_residues MQRLACGLALTVIGAAVLSACGSAGGSASTSGVVTGSYFRHAKVCLDRNGNGRCDSTEISTYTDDNGAFSLNGQGDVVVE VGTDAVRYDPDAKTATPVTDPLVFRAPASAPGVVSSLSTEVADLMDGGMDLASARGAVAARVGVPADKLLGDHNKESDPD VKAALKAAINQNIDAIAGAMKEAGAGGDVKASLHKRMALSDIKNVVVIYAENRGFDNLYGLFPGANGVPGVNPASKGGYV AQKDFDNSVLPALPPTWGGLTAAGQPVTLSQAQTIGFANKPFQIDDPNGLNGTGVAVPQSVVTRDLVHRFYNNQMQINGG ANDKFAAYSDAGSLSMGYYDGSKMAMWKLAQQYTLADNFFMGAFGGSFLNHQYLVCACAPQYPNADASPAKGSISAIDVD GNGNFIRLTPAANAPASVLSGPAKYLNDGNLTPKDAAGMYYAVNTMQPAFQPSGNAPASGDASGLYADPAKANTLPAQTQ ATIADRLDAKKVSWAWYAGGWAQSTADRSKIYNGSVPNFQAHHQPFNYYAGFDPSKQAAYRGQHLKDFDQDFLGAAAAGT LPQVAFYKPQGNLNQHAGYASVADGDAHIASVIAKLQQSPQWKNMLVVVTYDENGGFYDHAAVPKGDRWGPGTRIPAMLI SPFAKKGYVDHTQYDTASILRFLTRRFGLQPLPGVTARDVALVRNGGKPMGDFTSALTFN
Specific function: Unknown
COG id: COG3511
COG function: function code M; Phospholipase C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial phospholipase C family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007312 - InterPro: IPR006311 [H]
Pfam domain/function: PF04185 Phosphoesterase [H]
EC number: =3.1.4.3 [H]
Molecular weight: Translated: 73305; Mature: 73305
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRLACGLALTVIGAAVLSACGSAGGSASTSGVVTGSYFRHAKVCLDRNGNGRCDSTEIS CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHEEEEEEECCCCCCCCCCCCC TYTDDNGAFSLNGQGDVVVEVGTDAVRYDPDAKTATPVTDPLVFRAPASAPGVVSSLSTE EEECCCCEEEECCCCCEEEEECCCCEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHH VADLMDGGMDLASARGAVAARVGVPADKLLGDHNKESDPDVKAALKAAINQNIDAIAGAM HHHHHHCCCHHHHCCCCEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHH KEAGAGGDVKASLHKRMALSDIKNVVVIYAENRGFDNLYGLFPGANGVPGVNPASKGGYV HHCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHEECCCCCCCCCCCCCCCCCEE AQKDFDNSVLPALPPTWGGLTAAGQPVTLSQAQTIGFANKPFQIDDPNGLNGTGVAVPQS EECCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHCCCCCCCEECCCCCCCCCCCCCCCHH VVTRDLVHRFYNNQMQINGGANDKFAAYSDAGSLSMGYYDGSKMAMWKLAQQYTLADNFF HHHHHHHHHHHCCEEEECCCCCCCEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHCCCE MGAFGGSFLNHQYLVCACAPQYPNADASPAKGSISAIDVDGNGNFIRLTPAANAPASVLS EHHHCCHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCHHHHC GPAKYLNDGNLTPKDAAGMYYAVNTMQPAFQPSGNAPASGDASGLYADPAKANTLPAQTQ CCHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHH ATIADRLDAKKVSWAWYAGGWAQSTADRSKIYNGSVPNFQAHHQPFNYYAGFDPSKQAAY HHHHHHCCCCCEEEEEEECCHHHCCHHHHHCCCCCCCCCCCCCCCCCEECCCCCCHHHHH RGQHLKDFDQDFLGAAAAGTLPQVAFYKPQGNLNQHAGYASVADGDAHIASVIAKLQQSP CCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCC QWKNMLVVVTYDENGGFYDHAAVPKGDRWGPGTRIPAMLISPFAKKGYVDHTQYDTASIL CCCCEEEEEEECCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHH RFLTRRFGLQPLPGVTARDVALVRNGGKPMGDFTSALTFN HHHHHHCCCCCCCCCCHHHHHEEECCCCCCHHHHHHCCCC >Mature Secondary Structure MQRLACGLALTVIGAAVLSACGSAGGSASTSGVVTGSYFRHAKVCLDRNGNGRCDSTEIS CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHEEEEEEECCCCCCCCCCCCC TYTDDNGAFSLNGQGDVVVEVGTDAVRYDPDAKTATPVTDPLVFRAPASAPGVVSSLSTE EEECCCCEEEECCCCCEEEEECCCCEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHH VADLMDGGMDLASARGAVAARVGVPADKLLGDHNKESDPDVKAALKAAINQNIDAIAGAM HHHHHHCCCHHHHCCCCEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHH KEAGAGGDVKASLHKRMALSDIKNVVVIYAENRGFDNLYGLFPGANGVPGVNPASKGGYV HHCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHEECCCCCCCCCCCCCCCCCEE AQKDFDNSVLPALPPTWGGLTAAGQPVTLSQAQTIGFANKPFQIDDPNGLNGTGVAVPQS EECCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHCCCCCCCEECCCCCCCCCCCCCCCHH VVTRDLVHRFYNNQMQINGGANDKFAAYSDAGSLSMGYYDGSKMAMWKLAQQYTLADNFF HHHHHHHHHHHCCEEEECCCCCCCEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHCCCE MGAFGGSFLNHQYLVCACAPQYPNADASPAKGSISAIDVDGNGNFIRLTPAANAPASVLS EHHHCCHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCHHHHC GPAKYLNDGNLTPKDAAGMYYAVNTMQPAFQPSGNAPASGDASGLYADPAKANTLPAQTQ CCHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHH ATIADRLDAKKVSWAWYAGGWAQSTADRSKIYNGSVPNFQAHHQPFNYYAGFDPSKQAAY HHHHHHCCCCCEEEEEEECCHHHCCHHHHHCCCCCCCCCCCCCCCCCEECCCCCCHHHHH RGQHLKDFDQDFLGAAAAGTLPQVAFYKPQGNLNQHAGYASVADGDAHIASVIAKLQQSP CCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCC QWKNMLVVVTYDENGGFYDHAAVPKGDRWGPGTRIPAMLISPFAKKGYVDHTQYDTASIL CCCCEEEEEEECCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHH RFLTRRFGLQPLPGVTARDVALVRNGGKPMGDFTSALTFN HHHHHHCCCCCCCCCCHHHHHEEECCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]