| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is hisZ
Identifier: 34498984
GI number: 34498984
Start: 3837015
End: 3838166
Strand: Reverse
Name: hisZ
Synonym: CV_3529
Alternate gene names: 34498984
Gene position: 3838166-3837015 (Counterclockwise)
Preceding gene: 34498985
Following gene: 34498983
Centisome position: 80.79
GC content: 69.88
Gene sequence:
>1152_bases ATGCGTAATTGGCTGTTACCCGAATACATCGCTGACATCCTGCCGGCCACCGCGCGCCAGGTGGAGTCGGCCAAGGCCGC GATGCTGGAAGGCTTTCGCGTGGCCGGCTACGAACTGGTGCTGCCGCCGCTGATCGAATACATCGACTCGCTGGTGAGCG AAGGCGACGACACGCTGGACCTGAAAACCTTCAAGCTGGACGACCAGCTGTCCGGCCGCCAGCTGGGCCTGCGCGCCGAC ATCACGCCGCAGGTGGCGCGCATCGACGCCCACCTGCTGGGCGAGCGCACCGGCGTCACCCGCCTGTGTTACGCCGGCAG CGTGGTGCACAGCCGCCCGTCCGGCCTGACCAGCTCGCGCGAGCCGCTGCAGGTGGGCGCCGAGCTGTACGGCTACGCCG GCATCGAGGCCGACCAGGAGATCATCGAGCTGATGCTGGCCACGCTGGAAAAGGCCGGCGTGAAGAAGCTGCGGCTGGAT GTCGGCCATATCGCCATTTACCGCGGCCTGGCCGCGGCGGCCGGGCTGTCGCCCGAGGTCAGTCGCGAGCTGTTCGGCCT GCTGCAGAACAAGGACGCCGCCGGCATCGCCGCGCGGGTGGCCGGCGTGGCCGAGCCTTACAAGAGCGCTTTCCTGGCGC TGCCGGAACTGTACGGCCCGGCCGCGGTGCTGGAGAAGGCGCGCACCCGGCTGCCCTCGCTGCCTGAAGTGGAGCTGGGC TTGATGCAGCTGTCCGCCATCGCCCGCGCGATGGAGGGCAGGGTGGAGCTGAGCTTCGACCTGGCCGAGCTGCGCGGCGA CTTCTACCACACCGGCCTGATGTTCGCGGCCTACGCGCCCGGCTGGTCCGACGCGATCGCCCGCGGCGGCCGCTACGACA ATGTCGGCCGCCGCTTCGGCCGCGCCCGTCCCGCCACCGGCTTCAGCCTGGACCTGCGCGACCTGTTGCGCATCCTGCCG GAGCGAGACCCCAGCCGTGGCATCCGCGTCTCCGCGCGGCATCTGCCGGCGGCCGCCGCGGAAGTGTCGAGGCTGCGCGC CGAAGGCGAGATGGTGGTGGTGGATTATCTGGGCGAATCCGCGGCCGCGCTCAATTGCGACCGAGAGTTGGTTCCCGCTG CCGATGGTTGGCAGCTGGCGCCGTTTCATTGA
Upstream 100 bases:
>100_bases AGGCGACAATTGATTTTTTGAGAAGACTGGCCGGGGCGACCTGGCCAGTTTGCTGATGACAAGGCGGGTCCTTCCCCGCC TTTTATTCTGTTGAAACGAA
Downstream 100 bases:
>100_bases ATTTTTGTTTGAATCTGACTGACGAAGAGGTTTTTTCCAATGTCCAAGAACGTTGTCGTGATTGGCACCCAGTGGGGTGA CGAAGGCAAAGGCAAAATCG
Product: ATP phosphoribosyltransferase regulatory subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MRNWLLPEYIADILPATARQVESAKAAMLEGFRVAGYELVLPPLIEYIDSLVSEGDDTLDLKTFKLDDQLSGRQLGLRAD ITPQVARIDAHLLGERTGVTRLCYAGSVVHSRPSGLTSSREPLQVGAELYGYAGIEADQEIIELMLATLEKAGVKKLRLD VGHIAIYRGLAAAAGLSPEVSRELFGLLQNKDAAGIAARVAGVAEPYKSAFLALPELYGPAAVLEKARTRLPSLPEVELG LMQLSAIARAMEGRVELSFDLAELRGDFYHTGLMFAAYAPGWSDAIARGGRYDNVGRRFGRARPATGFSLDLRDLLRILP ERDPSRGIRVSARHLPAAAAEVSRLRAEGEMVVVDYLGESAAALNCDRELVPAADGWQLAPFH
Sequences:
>Translated_383_residues MRNWLLPEYIADILPATARQVESAKAAMLEGFRVAGYELVLPPLIEYIDSLVSEGDDTLDLKTFKLDDQLSGRQLGLRAD ITPQVARIDAHLLGERTGVTRLCYAGSVVHSRPSGLTSSREPLQVGAELYGYAGIEADQEIIELMLATLEKAGVKKLRLD VGHIAIYRGLAAAAGLSPEVSRELFGLLQNKDAAGIAARVAGVAEPYKSAFLALPELYGPAAVLEKARTRLPSLPEVELG LMQLSAIARAMEGRVELSFDLAELRGDFYHTGLMFAAYAPGWSDAIARGGRYDNVGRRFGRARPATGFSLDLRDLLRILP ERDPSRGIRVSARHLPAAAAEVSRLRAEGEMVVVDYLGESAAALNCDRELVPAADGWQLAPFH >Mature_383_residues MRNWLLPEYIADILPATARQVESAKAAMLEGFRVAGYELVLPPLIEYIDSLVSEGDDTLDLKTFKLDDQLSGRQLGLRAD ITPQVARIDAHLLGERTGVTRLCYAGSVVHSRPSGLTSSREPLQVGAELYGYAGIEADQEIIELMLATLEKAGVKKLRLD VGHIAIYRGLAAAAGLSPEVSRELFGLLQNKDAAGIAARVAGVAEPYKSAFLALPELYGPAAVLEKARTRLPSLPEVELG LMQLSAIARAMEGRVELSFDLAELRGDFYHTGLMFAAYAPGWSDAIARGGRYDNVGRRFGRARPATGFSLDLRDLLRILP ERDPSRGIRVSARHLPAAAAEVSRLRAEGEMVVVDYLGESAAALNCDRELVPAADGWQLAPFH
Specific function: Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
COG id: COG3705
COG function: function code E; ATP phosphoribosyltransferase involved in histidine biosynthesis
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family. HisZ subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HISZ_CHRVO (Q7NS97)
Other databases:
- EMBL: AE016825 - RefSeq: NP_903199.1 - ProteinModelPortal: Q7NS97 - SMR: Q7NS97 - GeneID: 2547623 - GenomeReviews: AE016825_GR - KEGG: cvi:CV_3529 - NMPDR: fig|243365.1.peg.3529 - HOGENOM: HBG616575 - OMA: DLRGYHY - ProtClustDB: PRK12292 - BioCyc: CVIO243365:CV_3529-MONOMER - GO: GO:0005737 - HAMAP: MF_00125 - InterPro: IPR004517 - InterPro: IPR004516 - PANTHER: PTHR11476 - PIRSF: PIRSF001549 - TIGRFAMs: TIGR00443
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41500; Mature: 41500
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNWLLPEYIADILPATARQVESAKAAMLEGFRVAGYELVLPPLIEYIDSLVSEGDDTLD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCEEHHHHHHHHHHHHHHCCCCCEE LKTFKLDDQLSGRQLGLRADITPQVARIDAHLLGERTGVTRLCYAGSVVHSRPSGLTSSR EEEEEECCCCCCCCCCEECCCCHHHHHHHHHHHHCCCCCHHHHHHCCHHHCCCCCCCCCC EPLQVGAELYGYAGIEADQEIIELMLATLEKAGVKKLRLDVGHIAIYRGLAAAAGLSPEV CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHH SRELFGLLQNKDAAGIAARVAGVAEPYKSAFLALPELYGPAAVLEKARTRLPSLPEVELG HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHH LMQLSAIARAMEGRVELSFDLAELRGDFYHTGLMFAAYAPGWSDAIARGGRYDNVGRRFG HHHHHHHHHHHCCCEEEEEEHHHHCCHHHHHHHHHEECCCCHHHHHHCCCCCCHHHHHHC RARPATGFSLDLRDLLRILPERDPSRGIRVSARHLPAAAAEVSRLRAEGEMVVVDYLGES CCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEHHHCCHHHHHHHHHHCCCCEEEEEECCCC AAALNCDRELVPAADGWQLAPFH HHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRNWLLPEYIADILPATARQVESAKAAMLEGFRVAGYELVLPPLIEYIDSLVSEGDDTLD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCEEHHHHHHHHHHHHHHCCCCCEE LKTFKLDDQLSGRQLGLRADITPQVARIDAHLLGERTGVTRLCYAGSVVHSRPSGLTSSR EEEEEECCCCCCCCCCEECCCCHHHHHHHHHHHHCCCCCHHHHHHCCHHHCCCCCCCCCC EPLQVGAELYGYAGIEADQEIIELMLATLEKAGVKKLRLDVGHIAIYRGLAAAAGLSPEV CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHH SRELFGLLQNKDAAGIAARVAGVAEPYKSAFLALPELYGPAAVLEKARTRLPSLPEVELG HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHH LMQLSAIARAMEGRVELSFDLAELRGDFYHTGLMFAAYAPGWSDAIARGGRYDNVGRRFG HHHHHHHHHHHCCCEEEEEEHHHHCCHHHHHHHHHEECCCCHHHHHHCCCCCCHHHHHHC RARPATGFSLDLRDLLRILPERDPSRGIRVSARHLPAAAAEVSRLRAEGEMVVVDYLGES CCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEHHHCCHHHHHHHHHHCCCCEEEEEECCCC AAALNCDRELVPAADGWQLAPFH HHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 14500782