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The map label for this gene is yqfA [C]

Identifier: 34498797

GI number: 34498797

Start: 3640688

End: 3641305

Strand: Reverse

Name: yqfA [C]

Synonym: CV_3342

Alternate gene names: 34498797

Gene position: 3641305-3640688 (Counterclockwise)

Preceding gene: 34498798

Following gene: 34498781

Centisome position: 76.64

GC content: 63.75

Gene sequence:

>618_bases
ATGTATCGCGGCGAACGTTTCAACGGCTATTCGCATCTTGCCGGCACCCTGCTGGCGATAGCCGGCCTGGTGGTGCTGGT
GGTCGAGGCGGCCATGCAGCGCGATCCGTGGAAGATCGTCAGTTTCAGCCTGTACGGCGGCACCCTGGTGACGCTGTACC
TGATCTCGACGCTGTACCACAGCTTCAAGGGCAGGGCCAAGGCCATCTTGCAGAAATGCGACCATTCGGCGATCTACCTG
CTGATCGCCGGCAGCTACACGCCGTTCGCGCTGGTGACGCTGCGCGGCGCCTGGGGTTGGACCCTGTTCGGCATCAGCTG
GGGACTGGCGCTGTTCGGCATCGTCCAGGAGCTGACGCTGGGGCGGCGCACCCGCATCCTGTCCATGATCCTGTACGTGG
CGATGGGATGGCTGGTGCTGATCGCCGTCAAGCCGCTGATCGAGGCGCTGGAGCCGGGCGGACTGTTCTGGCTGGCGCTG
GGCGGCCTGCTGTACAGCGCCGGCATCTACTGGTTTCTCAACGACGAGAAAATCCGCCACGGCCATGGCATCTGGCATCT
GTTCGTGCTGGGGGGCAGCATCTGCCAGTACCTGTGCGTGTTGAACTACGTCGCCTGA

Upstream 100 bases:

>100_bases
GGACGGGGGACAATGGAACCCAGAGGAGCCGGGAAGGCTCCAATCTGGGTTGCAACCGTTTCAAGCGCCGGCCGGATGCC
GGCGCCAAGGAAAAACAATC

Downstream 100 bases:

>100_bases
GCGAGCGGGCGGAAACGGAAAAACGGCAGCGGAGCGCTGCCGTTTTTGTTTGGATGGCCGCGGGGATCAGTCGCCGAACT
GCACCGGCAGCCGGTCCTCG

Product: hemolysin III

Products: NA

Alternate protein names: Hemolysin III; Hly-III [H]

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MYRGERFNGYSHLAGTLLAIAGLVVLVVEAAMQRDPWKIVSFSLYGGTLVTLYLISTLYHSFKGRAKAILQKCDHSAIYL
LIAGSYTPFALVTLRGAWGWTLFGISWGLALFGIVQELTLGRRTRILSMILYVAMGWLVLIAVKPLIEALEPGGLFWLAL
GGLLYSAGIYWFLNDEKIRHGHGIWHLFVLGGSICQYLCVLNYVA

Sequences:

>Translated_205_residues
MYRGERFNGYSHLAGTLLAIAGLVVLVVEAAMQRDPWKIVSFSLYGGTLVTLYLISTLYHSFKGRAKAILQKCDHSAIYL
LIAGSYTPFALVTLRGAWGWTLFGISWGLALFGIVQELTLGRRTRILSMILYVAMGWLVLIAVKPLIEALEPGGLFWLAL
GGLLYSAGIYWFLNDEKIRHGHGIWHLFVLGGSICQYLCVLNYVA
>Mature_205_residues
MYRGERFNGYSHLAGTLLAIAGLVVLVVEAAMQRDPWKIVSFSLYGGTLVTLYLISTLYHSFKGRAKAILQKCDHSAIYL
LIAGSYTPFALVTLRGAWGWTLFGISWGLALFGIVQELTLGRRTRILSMILYVAMGWLVLIAVKPLIEALEPGGLFWLAL
GGLLYSAGIYWFLNDEKIRHGHGIWHLFVLGGSICQYLCVLNYVA

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Homo sapiens, GI154759275, Length=179, Percent_Identity=27.9329608938547, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI52630445, Length=203, Percent_Identity=27.0935960591133, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI154759277, Length=203, Percent_Identity=25.1231527093596, Blast_Score=68, Evalue=6e-12,
Organism=Escherichia coli, GI1789266, Length=202, Percent_Identity=45.049504950495, Blast_Score=157, Evalue=3e-40,
Organism=Caenorhabditis elegans, GI71996356, Length=171, Percent_Identity=35.672514619883, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24640324, Length=183, Percent_Identity=28.9617486338798, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 22774; Mature: 22774

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRGERFNGYSHLAGTLLAIAGLVVLVVEAAMQRDPWKIVSFSLYGGTLVTLYLISTLYH
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHH
SFKGRAKAILQKCDHSAIYLLIAGSYTPFALVTLRGAWGWTLFGISWGLALFGIVQELTL
HHCHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
GRRTRILSMILYVAMGWLVLIAVKPLIEALEPGGLFWLALGGLLYSAGIYWFLNDEKIRH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEECCCEEEC
GHGIWHLFVLGGSICQYLCVLNYVA
CCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYRGERFNGYSHLAGTLLAIAGLVVLVVEAAMQRDPWKIVSFSLYGGTLVTLYLISTLYH
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHH
SFKGRAKAILQKCDHSAIYLLIAGSYTPFALVTLRGAWGWTLFGISWGLALFGIVQELTL
HHCHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
GRRTRILSMILYVAMGWLVLIAVKPLIEALEPGGLFWLALGGLLYSAGIYWFLNDEKIRH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEECCCEEEC
GHGIWHLFVLGGSICQYLCVLNYVA
CCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7495855 [H]