| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is adk
Identifier: 34498798
GI number: 34498798
Start: 3641481
End: 3642137
Strand: Reverse
Name: adk
Synonym: CV_3343
Alternate gene names: 34498798
Gene position: 3642137-3641481 (Counterclockwise)
Preceding gene: 34498799
Following gene: 34498797
Centisome position: 76.66
GC content: 67.88
Gene sequence:
>657_bases ATGCGATTGATCCTGTTGGGCGCGCCCGGCGCCGGCAAAGGCACCCAGGCCAACTACATCCGCGAGAAGTTCGGCATCCC GCAGATCTCCACCGGCGACATGCTGCGCGCCGCGGTCAAGGCCGGCACCCCGCTGGGCCTGGAAGCCAAGGCCATCATGG ATGCCGGCGGCCTGGTCCGCGACGACATCATCATCGGCCTGGTCAAGGAGCGAATCGCCCAGGACGACTGCGCCAACGGC TTCCTGTTCGACGGCTTCCCGCGCACCATTCCGCAGGCGGAAGCGATGATCGCCGCCGGCGTCGACATCGACTACGTGGT GGAGATCGACGTGCCGGACGCCGCCATCGTCGAGCGCATGGCCGGCCGCCGCGTGCACCTGGCTTCGGGCCGCACCTACC ATGTCACCTTCAACCCGCCCAAAGCGGCCGGCAAGGACGACGTGACCGGCGAGGACCTGGTCCAGCGCGACGACGACAAG GAAGAAACCGTGAAGAAGCGCCTGGCTGTCTACCACGAGCAGACCGCCGTGCTGGTGGGCTTCTACGGCAAGCTGGCCGA GAGCGGCAGCGCCAAGGCGCCGAAGTACGTGAAGATCGACGGCACCCGCGCGGTGGAAACCGTGCGCGACGACGTGCTGA AGGCGCTGGGCGCCTGA
Upstream 100 bases:
>100_bases CGGAAGACCTGGAACGGGTGCGCCGGCTGTTCGCCTGAGGGGCAGGGAGCGGCCGCTCCGTCAAAGAATTCATAAATCAA ACAGAACTGGAGTCACACAA
Downstream 100 bases:
>100_bases GTCTCCGCGGCAATCGGCAAGCAAGCGGGCTTCGGCCCGCTTTTTGTTTGCGCAAACCGCTAGTCTTGGGCCGCCGGACG GGGGACAATGGAACCCAGAG
Product: adenylate kinase
Products: NA
Alternate protein names: AK; ATP-AMP transphosphorylase
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MRLILLGAPGAGKGTQANYIREKFGIPQISTGDMLRAAVKAGTPLGLEAKAIMDAGGLVRDDIIIGLVKERIAQDDCANG FLFDGFPRTIPQAEAMIAAGVDIDYVVEIDVPDAAIVERMAGRRVHLASGRTYHVTFNPPKAAGKDDVTGEDLVQRDDDK EETVKKRLAVYHEQTAVLVGFYGKLAESGSAKAPKYVKIDGTRAVETVRDDVLKALGA
Sequences:
>Translated_218_residues MRLILLGAPGAGKGTQANYIREKFGIPQISTGDMLRAAVKAGTPLGLEAKAIMDAGGLVRDDIIIGLVKERIAQDDCANG FLFDGFPRTIPQAEAMIAAGVDIDYVVEIDVPDAAIVERMAGRRVHLASGRTYHVTFNPPKAAGKDDVTGEDLVQRDDDK EETVKKRLAVYHEQTAVLVGFYGKLAESGSAKAPKYVKIDGTRAVETVRDDVLKALGA >Mature_218_residues MRLILLGAPGAGKGTQANYIREKFGIPQISTGDMLRAAVKAGTPLGLEAKAIMDAGGLVRDDIIIGLVKERIAQDDCANG FLFDGFPRTIPQAEAMIAAGVDIDYVVEIDVPDAAIVERMAGRRVHLASGRTYHVTFNPPKAAGKDDVTGEDLVQRDDDK EETVKKRLAVYHEQTAVLVGFYGKLAESGSAKAPKYVKIDGTRAVETVRDDVLKALGA
Specific function: This small ubiquitous enzyme is essential for maintenance and cell growth
COG id: COG0563
COG function: function code F; Adenylate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylate kinase family
Homologues:
Organism=Homo sapiens, GI7524346, Length=188, Percent_Identity=48.4042553191489, Blast_Score=193, Evalue=1e-49, Organism=Homo sapiens, GI4502013, Length=188, Percent_Identity=48.4042553191489, Blast_Score=192, Evalue=1e-49, Organism=Homo sapiens, GI19923437, Length=184, Percent_Identity=45.1086956521739, Blast_Score=169, Evalue=2e-42, Organism=Homo sapiens, GI310110345, Length=182, Percent_Identity=39.010989010989, Blast_Score=139, Evalue=2e-33, Organism=Homo sapiens, GI53832003, Length=182, Percent_Identity=39.010989010989, Blast_Score=139, Evalue=2e-33, Organism=Homo sapiens, GI8051579, Length=182, Percent_Identity=39.010989010989, Blast_Score=139, Evalue=2e-33, Organism=Homo sapiens, GI53832001, Length=182, Percent_Identity=39.010989010989, Blast_Score=139, Evalue=2e-33, Organism=Homo sapiens, GI22749187, Length=183, Percent_Identity=28.9617486338798, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI4502011, Length=183, Percent_Identity=30.0546448087432, Blast_Score=91, Evalue=5e-19, Organism=Homo sapiens, GI7706497, Length=220, Percent_Identity=28.6363636363636, Blast_Score=77, Evalue=8e-15, Organism=Homo sapiens, GI28144897, Length=181, Percent_Identity=27.6243093922652, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI28144899, Length=181, Percent_Identity=27.6243093922652, Blast_Score=72, Evalue=5e-13, Organism=Escherichia coli, GI1786680, Length=217, Percent_Identity=67.741935483871, Blast_Score=303, Evalue=8e-84, Organism=Caenorhabditis elegans, GI17552384, Length=188, Percent_Identity=46.2765957446808, Blast_Score=183, Evalue=7e-47, Organism=Caenorhabditis elegans, GI17537943, Length=186, Percent_Identity=33.8709677419355, Blast_Score=117, Evalue=4e-27, Organism=Caenorhabditis elegans, GI17567503, Length=188, Percent_Identity=33.5106382978723, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17550688, Length=220, Percent_Identity=26.8181818181818, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17533833, Length=220, Percent_Identity=26.8181818181818, Blast_Score=71, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6320432, Length=222, Percent_Identity=48.1981981981982, Blast_Score=212, Evalue=3e-56, Organism=Saccharomyces cerevisiae, GI6321018, Length=188, Percent_Identity=42.0212765957447, Blast_Score=142, Evalue=4e-35, Organism=Saccharomyces cerevisiae, GI6322828, Length=217, Percent_Identity=29.4930875576037, Blast_Score=83, Evalue=3e-17, Organism=Drosophila melanogaster, GI22026816, Length=184, Percent_Identity=50, Blast_Score=196, Evalue=7e-51, Organism=Drosophila melanogaster, GI17737899, Length=184, Percent_Identity=44.0217391304348, Blast_Score=151, Evalue=3e-37, Organism=Drosophila melanogaster, GI24645822, Length=184, Percent_Identity=44.0217391304348, Blast_Score=151, Evalue=3e-37, Organism=Drosophila melanogaster, GI17647141, Length=218, Percent_Identity=29.8165137614679, Blast_Score=98, Evalue=5e-21, Organism=Drosophila melanogaster, GI24663208, Length=218, Percent_Identity=29.8165137614679, Blast_Score=98, Evalue=5e-21,
Paralogues:
None
Copy number: 1640 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 847 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): KAD_CHRVO (Q7NSS7)
Other databases:
- EMBL: AE016825 - RefSeq: NP_903013.1 - ProteinModelPortal: Q7NSS7 - SMR: Q7NSS7 - GeneID: 2547821 - GenomeReviews: AE016825_GR - KEGG: cvi:CV_3343 - NMPDR: fig|243365.1.peg.3343 - HOGENOM: HBG630208 - OMA: RTYHVKY - PhylomeDB: Q7NSS7 - ProtClustDB: PRK00279 - BioCyc: CVIO243365:CV_3343-MONOMER - BRENDA: 2.7.4.3 - GO: GO:0005737 - HAMAP: MF_00235 - InterPro: IPR006259 - InterPro: IPR000850 - InterPro: IPR007862 - PANTHER: PTHR23359 - PRINTS: PR00094 - TIGRFAMs: TIGR01351
Pfam domain/function: PF00406 ADK; PF05191 ADK_lid
EC number: =2.7.4.3
Molecular weight: Translated: 23321; Mature: 23321
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: PS00113 ADENYLATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLILLGAPGAGKGTQANYIREKFGIPQISTGDMLRAAVKAGTPLGLEAKAIMDAGGLVR CEEEEEECCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCCH DDIIIGLVKERIAQDDCANGFLFDGFPRTIPQAEAMIAAGVDIDYVVEIDVPDAAIVERM HHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHEEECCCEEEEEEECCCCHHHHHHH AGRRVHLASGRTYHVTFNPPKAAGKDDVTGEDLVQRDDDKEETVKKRLAVYHEQTAVLVG CCCEEEEECCCEEEEEECCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEE FYGKLAESGSAKAPKYVKIDGTRAVETVRDDVLKALGA HHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MRLILLGAPGAGKGTQANYIREKFGIPQISTGDMLRAAVKAGTPLGLEAKAIMDAGGLVR CEEEEEECCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCCH DDIIIGLVKERIAQDDCANGFLFDGFPRTIPQAEAMIAAGVDIDYVVEIDVPDAAIVERM HHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHEEECCCEEEEEEECCCCHHHHHHH AGRRVHLASGRTYHVTFNPPKAAGKDDVTGEDLVQRDDDKEETVKKRLAVYHEQTAVLVG CCCEEEEECCCEEEEEECCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEE FYGKLAESGSAKAPKYVKIDGTRAVETVRDDVLKALGA HHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14500782