| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is kefB [H]
Identifier: 34498781
GI number: 34498781
Start: 3624631
End: 3626601
Strand: Reverse
Name: kefB [H]
Synonym: CV_3326
Alternate gene names: 34498781
Gene position: 3626601-3624631 (Counterclockwise)
Preceding gene: 34498797
Following gene: 34498774
Centisome position: 76.33
GC content: 66.87
Gene sequence:
>1971_bases ATGCATTCCATGGCCCCCATCGTCCTCGTCCTGCTGGCCGCCGTGCTGGTGGTCACCCTGTGCCGCAGCCTGAAGGTGCC GGCCATGCTCGGCTACCTGGTGGTGGGCTTCCTGACGGGGCCGGGGGTGATGAACCTGATTCCGCAGGGCAAGGAGACTG CCTTCCTCGGCGAGATCGGCATCGTGTTCATGATGTTCACCATAGGCCTGGAGTTTTCGCTGCCCAGGCTGAGGGCGATG CGCCAGCTGGTGTTCGGCGTCGGTTTCGCCCAGGTGGCGCTGACCATGCTGCTGGTGGCGATGGCCATCGCCTATCTGAC AGGCAGCCCGCTGACTGGTTTCGCCATCGGCGGGGCATTGGCGATGTCGTCCACCGCCATCGTCAGCAAACTGCTGGCGG AACGGCTGGAATTGAACCAGCCGCACGGCCAGCTGGCGATCGGCGTGCTGCTGTTCCAGGACATCGCCGTGGTGCCGCTG CTGATCATGCTGCCGGCCTTCGCCGGCGGCAGCGACACGCTGTGGCTGGATCTGGCCAAGGCGGGCGGCAAGGTGCTGGT GGTGCTGGCCTTGCTGCTGTTCTTCGGCCAGCGTCTGGTGCGGCCCTGGTTCCACCTGGTGGCGCGCCAGCGTTCCGGCG AATTGTTCATGATCAACGTGCTGCTGGTGACGCTGGGCATCGCCTGGATGACCGAGCTCTCCGGCCTCAGCCTGGCGCTG GGGGCCTTCGTCGCCGGCATGCTGATCTCGGAAACCGAGTACCGCTACCAGGTGGAGGAGGACATCAAGCCTTTCCGCGA CATCCTGCTGGGTTTCTTCTTCATCACCGTGGGCATGAAGCTGGAATTGTCGGTGCTGTTCGGCCGCTTCGGCGAGGTTT TGCTGTTGCTGGCGCTGCTGCTGCCTTTGAAGCTGGCGGTGGTGTTCGGTCTGGGCCGTTTGTTCGGCCATCGTTCCAAC GACGCGATGCGCTCGGCGCTGGCTCTGGCCCAGGGCGGCGAGTTCGGCTTCGTGCTGCTGTCGCTGGCGCTGAACTTGAA GCTGGTGGCCGCGCCGATGGCCCAGGCCGCCATCGCCGCGATACTGATCTCCATGCTGGCGGCGCCTTTCCTGATCATGC ACGGCGAGCGCATCACCCGCAGGCTGATCAAGCAGGACTGGATGCTGCAATCGCTGGACCTGCACCAGATGCTGGTGGCC GGCATGAGCAAGGACGAGCATGTGCTGATTTGCGGCTACGGCCGCAGCGGCCAGGCGCTGGCCCGTTTGCTGGAGACCGA GAAGATCAATATGTTCGCGCTGGACATGGATCCGGAGCGGGTGAGGGAGGCGGGCGAGGCCGGCGACCCGGTGGTGTTCG GCGACGCCGGCAAGAAGGAGGTGCTGCTCGCCGCCGGCCTGATGCGCGCCAAGGTGGTGGTGGTGACCTTCGCCGACACC CATGCCGCCTTGCGCATTTTGCACACGGTGCGCGAGGTGCGGCCGGATCTGCCGGTGATCGTGCGCACCATAGATGAAAG CGAGCTGGACGTGCTGCGCCAGGCCGGCGCCGACGAGGTGGTGGCCGAGGTGATGGAAGGCAGCCTGATGCTGGCCTCGC AGGCGCTGCTGGAGGCGGGCGTGCCGCCCAGCCGGGTGCTGCGGCGCATCCGCGCGGTGCGCGAGGAACGCTACGATCTG TTCCGCGGCTTCTTCCGCGGCAGCAGCGACGAGACGGAAAGCCTGGAGGAGTCGCTGGTGCCCCGGCTGCTGAGCGTGCA GGTATGCGGCGGCGCGGCGGCGATCGGCCAGCCGCTGGGCGCGCTGGGCCTGGACGCGCTGGGCGTGGAGCTGAAGGCGA TCCGCCGCAACCGCGTGCGCCGCACCGATTTCGACGACAGCTTCGAGGTGGCGCCGGACGACGTGATGGTGCTGCTCGGC ACGCCGGAGCAGCTGGCGCTGGCTGAGTCGAGAATCCTGCAGGGAGATTGA
Upstream 100 bases:
>100_bases ATATCAAAGGTTATAATCGATTGACGCGGGTGCTGGTGCAAGTTTTGCTTGGCGGTCGTGTTTTCCGTTGCCAATTCTTA CCCAGGAGCCCCGTCCGCCG
Downstream 100 bases:
>100_bases GCCCCGCGCCCAATGAAAAAGCCCCGGTTTCCCGGGGCTTTTCGTTTGGGGCCGTCGGCTCAGGGCAGTATCGTGGTGAT CTGCTTCTGAAGCTGCTGCT
Product: glutathione-regulated potassium-efflux system protein
Products: Proton [Cytoplasm]; K (I) [Periplasm] [C]
Alternate protein names: K(+)/H(+) antiporter; NEM-activatable K(+)/H(+) antiporter [H]
Number of amino acids: Translated: 656; Mature: 656
Protein sequence:
>656_residues MHSMAPIVLVLLAAVLVVTLCRSLKVPAMLGYLVVGFLTGPGVMNLIPQGKETAFLGEIGIVFMMFTIGLEFSLPRLRAM RQLVFGVGFAQVALTMLLVAMAIAYLTGSPLTGFAIGGALAMSSTAIVSKLLAERLELNQPHGQLAIGVLLFQDIAVVPL LIMLPAFAGGSDTLWLDLAKAGGKVLVVLALLLFFGQRLVRPWFHLVARQRSGELFMINVLLVTLGIAWMTELSGLSLAL GAFVAGMLISETEYRYQVEEDIKPFRDILLGFFFITVGMKLELSVLFGRFGEVLLLLALLLPLKLAVVFGLGRLFGHRSN DAMRSALALAQGGEFGFVLLSLALNLKLVAAPMAQAAIAAILISMLAAPFLIMHGERITRRLIKQDWMLQSLDLHQMLVA GMSKDEHVLICGYGRSGQALARLLETEKINMFALDMDPERVREAGEAGDPVVFGDAGKKEVLLAAGLMRAKVVVVTFADT HAALRILHTVREVRPDLPVIVRTIDESELDVLRQAGADEVVAEVMEGSLMLASQALLEAGVPPSRVLRRIRAVREERYDL FRGFFRGSSDETESLEESLVPRLLSVQVCGGAAAIGQPLGALGLDALGVELKAIRRNRVRRTDFDDSFEVAPDDVMVLLG TPEQLALAESRILQGD
Sequences:
>Translated_656_residues MHSMAPIVLVLLAAVLVVTLCRSLKVPAMLGYLVVGFLTGPGVMNLIPQGKETAFLGEIGIVFMMFTIGLEFSLPRLRAM RQLVFGVGFAQVALTMLLVAMAIAYLTGSPLTGFAIGGALAMSSTAIVSKLLAERLELNQPHGQLAIGVLLFQDIAVVPL LIMLPAFAGGSDTLWLDLAKAGGKVLVVLALLLFFGQRLVRPWFHLVARQRSGELFMINVLLVTLGIAWMTELSGLSLAL GAFVAGMLISETEYRYQVEEDIKPFRDILLGFFFITVGMKLELSVLFGRFGEVLLLLALLLPLKLAVVFGLGRLFGHRSN DAMRSALALAQGGEFGFVLLSLALNLKLVAAPMAQAAIAAILISMLAAPFLIMHGERITRRLIKQDWMLQSLDLHQMLVA GMSKDEHVLICGYGRSGQALARLLETEKINMFALDMDPERVREAGEAGDPVVFGDAGKKEVLLAAGLMRAKVVVVTFADT HAALRILHTVREVRPDLPVIVRTIDESELDVLRQAGADEVVAEVMEGSLMLASQALLEAGVPPSRVLRRIRAVREERYDL FRGFFRGSSDETESLEESLVPRLLSVQVCGGAAAIGQPLGALGLDALGVELKAIRRNRVRRTDFDDSFEVAPDDVMVLLG TPEQLALAESRILQGD >Mature_656_residues MHSMAPIVLVLLAAVLVVTLCRSLKVPAMLGYLVVGFLTGPGVMNLIPQGKETAFLGEIGIVFMMFTIGLEFSLPRLRAM RQLVFGVGFAQVALTMLLVAMAIAYLTGSPLTGFAIGGALAMSSTAIVSKLLAERLELNQPHGQLAIGVLLFQDIAVVPL LIMLPAFAGGSDTLWLDLAKAGGKVLVVLALLLFFGQRLVRPWFHLVARQRSGELFMINVLLVTLGIAWMTELSGLSLAL GAFVAGMLISETEYRYQVEEDIKPFRDILLGFFFITVGMKLELSVLFGRFGEVLLLLALLLPLKLAVVFGLGRLFGHRSN DAMRSALALAQGGEFGFVLLSLALNLKLVAAPMAQAAIAAILISMLAAPFLIMHGERITRRLIKQDWMLQSLDLHQMLVA GMSKDEHVLICGYGRSGQALARLLETEKINMFALDMDPERVREAGEAGDPVVFGDAGKKEVLLAAGLMRAKVVVVTFADT HAALRILHTVREVRPDLPVIVRTIDESELDVLRQAGADEVVAEVMEGSLMLASQALLEAGVPPSRVLRRIRAVREERYDL FRGFFRGSSDETESLEESLVPRLLSVQVCGGAAAIGQPLGALGLDALGVELKAIRRNRVRRTDFDDSFEVAPDDVMVLLG TPEQLALAESRILQGD
Specific function: Transport system that facilitates potassium-efflux, possibly by potassium-proton antiport [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI157388921, Length=384, Percent_Identity=28.3854166666667, Blast_Score=102, Evalue=1e-21, Organism=Escherichia coli, GI1789749, Length=545, Percent_Identity=34.4954128440367, Blast_Score=264, Evalue=1e-71, Organism=Escherichia coli, GI1786232, Length=564, Percent_Identity=32.4468085106383, Blast_Score=258, Evalue=9e-70, Organism=Escherichia coli, GI1786685, Length=536, Percent_Identity=32.089552238806, Blast_Score=227, Evalue=2e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR020884 - InterPro: IPR004771 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 71053; Mature: 71053
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSMAPIVLVLLAAVLVVTLCRSLKVPAMLGYLVVGFLTGPGVMNLIPQGKETAFLGEIG CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHH IVFMMFTIGLEFSLPRLRAMRQLVFGVGFAQVALTMLLVAMAIAYLTGSPLTGFAIGGAL HHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH AMSSTAIVSKLLAERLELNQPHGQLAIGVLLFQDIAVVPLLIMLPAFAGGSDTLWLDLAK HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHH AGGKVLVVLALLLFFGQRLVRPWFHLVARQRSGELFMINVLLVTLGIAWMTELSGLSLAL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCHHHHH GAFVAGMLISETEYRYQVEEDIKPFRDILLGFFFITVGMKLELSVLFGRFGEVLLLLALL HHHHHHHHHHCCHHHEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LPLKLAVVFGLGRLFGHRSNDAMRSALALAQGGEFGFVLLSLALNLKLVAAPMAQAAIAA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ILISMLAAPFLIMHGERITRRLIKQDWMLQSLDLHQMLVAGMSKDEHVLICGYGRSGQAL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEECCCCHHHH ARLLETEKINMFALDMDPERVREAGEAGDPVVFGDAGKKEVLLAAGLMRAKVVVVTFADT HHHHHHCCCEEEEECCCHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHCEEEEEEECCH HAALRILHTVREVRPDLPVIVRTIDESELDVLRQAGADEVVAEVMEGSLMLASQALLEAG HHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCC VPPSRVLRRIRAVREERYDLFRGFFRGSSDETESLEESLVPRLLSVQVCGGAAAIGQPLG CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCHH ALGLDALGVELKAIRRNRVRRTDFDDSFEVAPDDVMVLLGTPEQLALAESRILQGD HHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCC >Mature Secondary Structure MHSMAPIVLVLLAAVLVVTLCRSLKVPAMLGYLVVGFLTGPGVMNLIPQGKETAFLGEIG CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHH IVFMMFTIGLEFSLPRLRAMRQLVFGVGFAQVALTMLLVAMAIAYLTGSPLTGFAIGGAL HHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH AMSSTAIVSKLLAERLELNQPHGQLAIGVLLFQDIAVVPLLIMLPAFAGGSDTLWLDLAK HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHH AGGKVLVVLALLLFFGQRLVRPWFHLVARQRSGELFMINVLLVTLGIAWMTELSGLSLAL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCHHHHH GAFVAGMLISETEYRYQVEEDIKPFRDILLGFFFITVGMKLELSVLFGRFGEVLLLLALL HHHHHHHHHHCCHHHEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LPLKLAVVFGLGRLFGHRSNDAMRSALALAQGGEFGFVLLSLALNLKLVAAPMAQAAIAA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ILISMLAAPFLIMHGERITRRLIKQDWMLQSLDLHQMLVAGMSKDEHVLICGYGRSGQAL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEECCCCHHHH ARLLETEKINMFALDMDPERVREAGEAGDPVVFGDAGKKEVLLAAGLMRAKVVVVTFADT HHHHHHCCCEEEEECCCHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHCEEEEEEECCH HAALRILHTVREVRPDLPVIVRTIDESELDVLRQAGADEVVAEVMEGSLMLASQALLEAG HHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCC VPPSRVLRRIRAVREERYDLFRGFFRGSSDETESLEESLVPRLLSVQVCGGAAAIGQPLG CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCHH ALGLDALGVELKAIRRNRVRRTDFDDSFEVAPDDVMVLLGTPEQLALAESRILQGD HHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Cytoplasm] = Proton [Cytoplasm] + K (I) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA