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The map label for this gene is vioD

Identifier: 34498726

GI number: 34498726

Start: 3559549

End: 3560670

Strand: Reverse

Name: vioD

Synonym: CV_3271

Alternate gene names: 34498726

Gene position: 3560670-3559549 (Counterclockwise)

Preceding gene: 34498727

Following gene: 34498725

Centisome position: 74.94

GC content: 67.38

Gene sequence:

>1122_bases
ATGAAGATTCTGGTCATCGGCGCGGGGCCGGCCGGCCTGGTGTTCGCCAGCCAACTGAAACAGGCGCGTCCGCTGTGGGC
GATAGACATCGTCGAAAAGAACGACGAGCAGGAAGTGCTGGGCTGGGGCGTGGTGCTGCCCGGCCGGCCCGGCCAGCATC
CGGCCAATCCGCTGTCCTACCTGGACGCGCCGGAGAGGCTGAATCCGCAGTTCCTGGAAGACTTCAAGCTGGTCCACCAC
AACGAGCCCAGCCTGATGAGCACCGGCGTGCTGCTGTGCGGCGTGGAGCGCCGCGGCCTGGTGCACGCCTTGCGCGACAA
GTGCCGCTCGCAGGGCATCGCCATCCGCTTCGAATCGCCGCTGCTGGAGCATGGCGAGCTGCCGCTGGCCGACTACGACC
TGGTGGTGCTGGCCAACGGCGTCAATCACAAGACCGCCCACTTCACCGAGGCGCTGGTGCCGCAGGTGGACTACGGCCGC
AACAAGTACATCTGGTACGGCACCAGCCAGCTGTTCGACCAGATGAACCTGGTGTTCCGCACCCACGGCAAGGACATTTT
CATCGCCCACGCCTACAAGTACTCGGACACGATGAGCACCTTCATCGTCGAGTGCAGCGAGGAGACCTATGCCCGCGCCC
GCCTGGGCGAGATGTCGGAAGAGGCGTCGGCCGAATACGTCGCCAAGGTGTTCCAGGCCGAGCTGGGCGGCCACGGCCTG
GTGAGCCAGCCCGGCCTCGGCTGGCGCAACTTCATGACCCTGAGCCACGACCGCTGCCACGACGGCAAGCTGGTGCTGCT
GGGCGACGCGCTGCAGTCCGGCCACTTCTCCATCGGCCACGGCACCACGATGGCGGTGGTGGTGGCGCAGCTGCTGGTGA
AGGCGCTGTGCACCGAGGACGGCGTGCCGGCCGCGCTGAAGCGCTTCGAGGAGCGCGCGCTGCCGCTGGTCCAGCTGTTC
CGCGGCCATGCCGACAACAGCCGGGTCTGGTTCGAGACGGTGGAGGAGCGCATGCACCTGTCCAGCGCCGAGTTCGTGCA
GAGCTTCGACGCGCGCCGCAAGTCGCTGCCGCCGATGCCGGAAGCGCTGGCGCAGAACCTGCGCTACGCGCTGCAACGCT
GA

Upstream 100 bases:

>100_bases
ACATGGCGGAGAAGCTGTACTTCACGTCCGAGCCGTACGACAGACTGCAGCAGATCCAGAGAAAACAGAACGTTTGGTAC
AAGATAGGGAGGGTCAACTG

Downstream 100 bases:

>100_bases
GGAGGCCGCATGGAAAACCGGGAACCGCCGCTGCTGCCGGCGCGCTGGAGCAGCGCCTATGTGTCGTACTGGAGTCCGAT
GCTGCCGGATGACCAGCTGA

Product: vioD - hydroxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHH
NEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGELPLADYDLVVLANGVNHKTAHFTEALVPQVDYGR
NKYIWYGTSQLFDQMNLVFRTHGKDIFIAHAYKYSDTMSTFIVECSEETYARARLGEMSEEASAEYVAKVFQAELGGHGL
VSQPGLGWRNFMTLSHDRCHDGKLVLLGDALQSGHFSIGHGTTMAVVVAQLLVKALCTEDGVPAALKRFEERALPLVQLF
RGHADNSRVWFETVEERMHLSSAEFVQSFDARRKSLPPMPEALAQNLRYALQR

Sequences:

>Translated_373_residues
MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHH
NEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGELPLADYDLVVLANGVNHKTAHFTEALVPQVDYGR
NKYIWYGTSQLFDQMNLVFRTHGKDIFIAHAYKYSDTMSTFIVECSEETYARARLGEMSEEASAEYVAKVFQAELGGHGL
VSQPGLGWRNFMTLSHDRCHDGKLVLLGDALQSGHFSIGHGTTMAVVVAQLLVKALCTEDGVPAALKRFEERALPLVQLF
RGHADNSRVWFETVEERMHLSSAEFVQSFDARRKSLPPMPEALAQNLRYALQR
>Mature_373_residues
MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHH
NEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGELPLADYDLVVLANGVNHKTAHFTEALVPQVDYGR
NKYIWYGTSQLFDQMNLVFRTHGKDIFIAHAYKYSDTMSTFIVECSEETYARARLGEMSEEASAEYVAKVFQAELGGHGL
VSQPGLGWRNFMTLSHDRCHDGKLVLLGDALQSGHFSIGHGTTMAVVVAQLLVKALCTEDGVPAALKRFEERALPLVQLF
RGHADNSRVWFETVEERMHLSSAEFVQSFDARRKSLPPMPEALAQNLRYALQR

Specific function: Unknown

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): VIOD_CHRVO (Q9S3U8)

Other databases:

- EMBL:   AF172851
- EMBL:   AB032799
- EMBL:   AE016825
- RefSeq:   NP_902941.1
- PDB:   3C4A
- PDBsum:   3C4A
- ProteinModelPortal:   Q9S3U8
- SMR:   Q9S3U8
- GeneID:   2548006
- GenomeReviews:   AE016825_GR
- KEGG:   cvi:CV_3271
- NMPDR:   fig|243365.1.peg.3271
- HOGENOM:   HBG659170
- OMA:   AAHTTHF
- BioCyc:   CVIO243365:CV_3271-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41623; Mature: 41623

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSY
CEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCHHH
LDAPERLNPQFLEDFKLVHHNEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESP
CCCCCCCCHHHHHHHHHHHCCCCCHHHCCEEEECCCHHHHHHHHHHHHHHCCEEEEECCC
LLEHGELPLADYDLVVLANGVNHKTAHFTEALVPQVDYGRNKYIWYGTSQLFDQMNLVFR
CHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHEE
THGKDIFIAHAYKYSDTMSTFIVECSEETYARARLGEMSEEASAEYVAKVFQAELGGHGL
ECCCEEEEEEEEEHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
VSQPGLGWRNFMTLSHDRCHDGKLVLLGDALQSGHFSIGHGTTMAVVVAQLLVKALCTED
CCCCCCCHHHHEEECCCCCCCCCEEEEECCCCCCCEECCCCHHHHHHHHHHHHHHHHCCC
GVPAALKRFEERALPLVQLFRGHADNSRVWFETVEERMHLSSAEFVQSFDARRKSLPPMP
CCHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCH
EALAQNLRYALQR
HHHHHHHHHHHCC
>Mature Secondary Structure
MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSY
CEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCHHH
LDAPERLNPQFLEDFKLVHHNEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESP
CCCCCCCCHHHHHHHHHHHCCCCCHHHCCEEEECCCHHHHHHHHHHHHHHCCEEEEECCC
LLEHGELPLADYDLVVLANGVNHKTAHFTEALVPQVDYGRNKYIWYGTSQLFDQMNLVFR
CHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHEE
THGKDIFIAHAYKYSDTMSTFIVECSEETYARARLGEMSEEASAEYVAKVFQAELGGHGL
ECCCEEEEEEEEEHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
VSQPGLGWRNFMTLSHDRCHDGKLVLLGDALQSGHFSIGHGTTMAVVVAQLLVKALCTED
CCCCCCCHHHHEEECCCCCCCCCEEEEECCCCCCCEECCCCHHHHHHHHHHHHHHHHCCC
GVPAALKRFEERALPLVQLFRGHADNSRVWFETVEERMHLSSAEFVQSFDARRKSLPPMP
CCHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCH
EALAQNLRYALQR
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11075927; 14500782