| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498725
Identifier: 34498725
GI number: 34498725
Start: 3558964
End: 3559539
Strand: Reverse
Name: 34498725
Synonym: CV_3270
Alternate gene names: NA
Gene position: 3559539-3558964 (Counterclockwise)
Preceding gene: 34498726
Following gene: 34498720
Centisome position: 74.92
GC content: 70.31
Gene sequence:
>576_bases ATGGAAAACCGGGAACCGCCGCTGCTGCCGGCGCGCTGGAGCAGCGCCTATGTGTCGTACTGGAGTCCGATGCTGCCGGA TGACCAGCTGACGTCCGGCTACTGCTGGTTCGACTACGAGCGCGACATCTGTCGGATAGACGGCCTGTTCAATCCCTGGT CGGAGCGCGACACCGGCTACCGGCTGTGGATGTCCGAGGTCGGCAACGCCGCCAGCGGCCGCACCTGGAAGCAGAAGGTG GCCTATGGCCGCGAGCGGACCGCCCTGGGCGAGCAGCTGTGCGAGCGGCCGCTGGACGACGAGACCGGCCCGTTCGCCGA GCTGTTCCTGCCGCGCGACGTGCTGCGCCGGCTGGGCGCCCGCCATATCGGCCGCCGCGTGGTGCTGGGCAGGGAAGCCG ACGGCTGGCGCTACCAGCGTCCGGGCAAGGGGCCGTCCACGTTGTACCTGGACGCCGCCAGCGGTACGCCGCTGAGGATG GTGACCGGGGACGAGGCGTCGCGCGCGTCGCTGCGCGATTTCCCCAACGTCAGCGAGGCCGAGATTCCCGACGCCGTCTT CGCCGCCAAGCGCTAG
Upstream 100 bases:
>100_bases GTTCGTGCAGAGCTTCGACGCGCGCCGCAAGTCGCTGCCGCCGATGCCGGAAGCGCTGGCGCAGAACCTGCGCTACGCGC TGCAACGCTGAGGAGGCCGC
Downstream 100 bases:
>100_bases GGCCTGGATCGGGCAGAAAAACGGGGCTGCTTTCGGGCAGCCCCATTGTCGTCGCCGGACGAGGATCAGGCGGGAACGGC CAGCGCCGCGGGCGAGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MENREPPLLPARWSSAYVSYWSPMLPDDQLTSGYCWFDYERDICRIDGLFNPWSERDTGYRLWMSEVGNAASGRTWKQKV AYGRERTALGEQLCERPLDDETGPFAELFLPRDVLRRLGARHIGRRVVLGREADGWRYQRPGKGPSTLYLDAASGTPLRM VTGDEASRASLRDFPNVSEAEIPDAVFAAKR
Sequences:
>Translated_191_residues MENREPPLLPARWSSAYVSYWSPMLPDDQLTSGYCWFDYERDICRIDGLFNPWSERDTGYRLWMSEVGNAASGRTWKQKV AYGRERTALGEQLCERPLDDETGPFAELFLPRDVLRRLGARHIGRRVVLGREADGWRYQRPGKGPSTLYLDAASGTPLRM VTGDEASRASLRDFPNVSEAEIPDAVFAAKR >Mature_191_residues MENREPPLLPARWSSAYVSYWSPMLPDDQLTSGYCWFDYERDICRIDGLFNPWSERDTGYRLWMSEVGNAASGRTWKQKV AYGRERTALGEQLCERPLDDETGPFAELFLPRDVLRRLGARHIGRRVVLGREADGWRYQRPGKGPSTLYLDAASGTPLRM VTGDEASRASLRDFPNVSEAEIPDAVFAAKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21778; Mature: 21778
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENREPPLLPARWSSAYVSYWSPMLPDDQLTSGYCWFDYERDICRIDGLFNPWSERDTGY CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCC RLWMSEVGNAASGRTWKQKVAYGRERTALGEQLCERPLDDETGPFAELFLPRDVLRRLGA EEEHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHH RHIGRRVVLGREADGWRYQRPGKGPSTLYLDAASGTPLRMVTGDEASRASLRDFPNVSEA HHHCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCHHHHHHHCCCCCCCH EIPDAVFAAKR HCCHHHHHCCC >Mature Secondary Structure MENREPPLLPARWSSAYVSYWSPMLPDDQLTSGYCWFDYERDICRIDGLFNPWSERDTGY CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCC RLWMSEVGNAASGRTWKQKVAYGRERTALGEQLCERPLDDETGPFAELFLPRDVLRRLGA EEEHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHH RHIGRRVVLGREADGWRYQRPGKGPSTLYLDAASGTPLRMVTGDEASRASLRDFPNVSEA HHHCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCHHHHHHHCCCCCCCH EIPDAVFAAKR HCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA